Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_14230

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
3,158,579	+				-1.8
3,158,579	+				+0.0
3,158,580	-				-0.4
3,158,712	+		AO353_14225	0.24	-1.7
3,158,749	-		AO353_14225	0.29	-0.1
3,158,758	+		AO353_14225	0.31	-1.4
3,158,758	+		AO353_14225	0.31	-0.6
3,158,758	+		AO353_14225	0.31	-1.7
3,158,758	+		AO353_14225	0.31	-1.1
3,158,758	+		AO353_14225	0.31	-1.7
3,158,759	-		AO353_14225	0.31	+2.8
3,158,759	-		AO353_14225	0.31	+1.0
3,158,823	+		AO353_14225	0.40	+0.2
3,158,823	+		AO353_14225	0.40	+1.3
3,158,824	-		AO353_14225	0.40	-1.6
3,158,824	-		AO353_14225	0.40	-0.1
3,158,954	+		AO353_14225	0.58	-1.4
3,159,098	+		AO353_14225	0.77	-0.9
3,159,099	-		AO353_14225	0.78	-1.2
3,159,112	+		AO353_14225	0.79	-1.0
3,159,112	+		AO353_14225	0.79	+0.9
3,159,112	+		AO353_14225	0.79	+0.6
3,159,112	+		AO353_14225	0.79	-0.8
3,159,112	+		AO353_14225	0.79	-0.1
3,159,112	+		AO353_14225	0.79	+1.5
3,159,112	+		AO353_14225	0.79	-1.4
3,159,112	+		AO353_14225	0.79	-0.5
3,159,112	+		AO353_14225	0.79	+0.2
3,159,112	+		AO353_14225	0.79	-0.9
3,159,112	+		AO353_14225	0.79	-1.1
3,159,112	+		AO353_14225	0.79	-2.2
3,159,112	+		AO353_14225	0.79	-0.1
3,159,112	+		AO353_14225	0.79	-0.8
3,159,112	+		AO353_14225	0.79	-2.6
3,159,112	+		AO353_14225	0.79	-1.8
3,159,112	+		AO353_14225	0.79	-1.0
3,159,112	+		AO353_14225	0.79	+2.5
3,159,112	+		AO353_14225	0.79	+0.3
3,159,112	+		AO353_14225	0.79	-0.7
3,159,112	+		AO353_14225	0.79	+0.6
3,159,112	+		AO353_14225	0.79	+0.1
3,159,113	-		AO353_14225	0.79	+0.2
3,159,113	-		AO353_14225	0.79	-1.1
3,159,113	-		AO353_14225	0.79	+0.4
3,159,113	-		AO353_14225	0.79	-2.0
3,159,113	-		AO353_14225	0.79	-1.0
3,159,113	-		AO353_14225	0.79	+0.4
3,159,113	-		AO353_14225	0.79	-0.5
3,159,113	-		AO353_14225	0.79	+0.5
3,159,113	-		AO353_14225	0.79	-1.7
3,159,113	-		AO353_14225	0.79	+0.3
3,159,113	-		AO353_14225	0.79	-0.1
3,159,113	-		AO353_14225	0.79	-0.1
3,159,113	-		AO353_14225	0.79	-0.7
3,159,113	-		AO353_14225	0.79	-1.2
3,159,113	-		AO353_14225	0.79	+0.3
3,159,113	-		AO353_14225	0.79	-0.2
3,159,113	-		AO353_14225	0.79	-0.7
3,159,114	+		AO353_14225	0.80	+3.9
3,159,114	+		AO353_14225	0.80	-2.3
3,159,114	+		AO353_14225	0.80	-1.2
3,159,114	+		AO353_14225	0.80	-1.5
3,159,114	+		AO353_14225	0.80	-0.6
3,159,114	+		AO353_14225	0.80	-1.7
3,159,115	-		AO353_14225	0.80	-0.1
3,159,115	-		AO353_14225	0.80	-0.4
3,159,150	+		AO353_14225	0.85	+0.1
3,159,151	-		AO353_14225	0.85	-0.3
3,159,151	-		AO353_14225	0.85	-0.8
3,159,161	-		AO353_14225	0.86	+0.7
3,159,265	+				-1.8
3,159,265	+				-0.1
3,159,265	+				+0.5
3,159,265	+				-0.6
3,159,266	-				+0.1
3,159,266	-				+1.4
3,159,266	-				-1.1
3,159,266	-				+0.2
3,159,266	-				+0.4
3,159,266	-				+0.3
3,159,319	+				-1.1
3,159,320	-				-1.4
3,159,320	-				-1.8
3,159,344	+				+0.1
3,159,344	+				+2.5
3,159,344	+				+0.2
3,159,345	-				-1.5
3,159,345	-				-1.1
3,159,348	+				+0.8
3,159,348	+				-3.6
3,159,348	+				-0.7
3,159,349	-				-3.2
3,159,349	-				+0.0
3,159,349	-				-1.8
3,159,349	-				-0.8
3,159,349	-				-2.3
3,159,349	-				-1.9
3,159,397	-				-0.8
3,159,397	-				-1.4
3,159,397	-				-1.8
3,159,397	-				-0.7
3,159,397	-				-2.6
3,159,398	+				-0.9
3,159,398	+				-1.8
3,159,398	+				-1.1
3,159,398	+				-0.6
3,159,398	+				-1.0
3,159,398	+				-2.2
3,159,399	-				-3.4
3,159,408	-				-1.1
3,159,414	+				-1.7
3,159,415	-				-0.9
3,159,426	-				-2.0
3,159,426	-				+0.0
3,159,632	+				-1.3
3,159,632	+				-1.9
3,159,632	+				-1.5
3,159,632	+				-2.4
3,159,632	+				+1.0
3,159,632	+				-0.9
3,159,632	+				-0.1
3,159,632	+				+1.8
3,159,633	-				-1.9
3,159,633	-				-1.2
3,159,722	+		AO353_14230	0.13	-0.5
3,159,722	+		AO353_14230	0.13	-2.6
3,159,722	+		AO353_14230	0.13	-0.6
3,159,722	+		AO353_14230	0.13	-0.1
3,159,722	+		AO353_14230	0.13	+0.4
3,159,723	-		AO353_14230	0.13	-0.3
3,159,723	-		AO353_14230	0.13	-2.1
3,159,876	+		AO353_14230	0.19	-0.9
3,159,876	+		AO353_14230	0.19	-0.6
3,159,876	+		AO353_14230	0.19	+0.2
3,159,876	+		AO353_14230	0.19	-2.2
3,159,876	+		AO353_14230	0.19	-0.7
3,159,876	+		AO353_14230	0.19	+0.4
3,159,877	-		AO353_14230	0.19	-1.3
3,159,880	+		AO353_14230	0.19	-2.1
3,159,880	+		AO353_14230	0.19	-0.1
3,159,880	+		AO353_14230	0.19	-3.4
3,159,880	+		AO353_14230	0.19	-2.6
3,159,880	+		AO353_14230	0.19	-1.0
3,159,880	+		AO353_14230	0.19	-1.0
3,159,880	+		AO353_14230	0.19	+0.2
3,159,880	+		AO353_14230	0.19	-1.6
3,159,880	+		AO353_14230	0.19	-0.9
3,159,880	+		AO353_14230	0.19	-3.0
3,159,880	+		AO353_14230	0.19	-2.9
3,159,880	+		AO353_14230	0.19	-2.4
3,159,880	+		AO353_14230	0.19	-1.8
3,159,881	-		AO353_14230	0.19	+0.4
3,159,881	-		AO353_14230	0.19	-0.6
3,159,881	-		AO353_14230	0.19	+0.0
3,159,881	-		AO353_14230	0.19	-2.3
3,159,881	-		AO353_14230	0.19	-0.6
3,159,881	-		AO353_14230	0.19	-0.8
3,159,881	-		AO353_14230	0.19	+2.9
3,159,881	-		AO353_14230	0.19	-1.8
3,159,881	-		AO353_14230	0.19	-1.5
3,159,881	-		AO353_14230	0.19	-1.9
3,160,023	+		AO353_14230	0.25	-1.1
3,160,023	+		AO353_14230	0.25	-0.1
3,160,141	+		AO353_14230	0.29	-3.2
3,160,346	-		AO353_14230	0.37	-1.7
3,160,354	+		AO353_14230	0.38	-3.1
3,160,354	+		AO353_14230	0.38	-2.4
3,160,354	+		AO353_14230	0.38	+0.0
3,160,354	+		AO353_14230	0.38	-1.6
3,160,354	+		AO353_14230	0.38	-0.3
3,160,354	+		AO353_14230	0.38	-1.5
3,160,354	+		AO353_14230	0.38	-0.3
3,160,354	+		AO353_14230	0.38	-0.1
3,160,355	-		AO353_14230	0.38	-2.4
3,160,355	-		AO353_14230	0.38	-1.0
3,160,355	-		AO353_14230	0.38	-0.7
3,160,355	-		AO353_14230	0.38	-1.4
3,160,355	-		AO353_14230	0.38	-0.8
3,160,355	-		AO353_14230	0.38	+2.4
3,160,355	-		AO353_14230	0.38	-1.4
3,160,356	+		AO353_14230	0.38	-1.1
3,160,356	+		AO353_14230	0.38	-1.6
3,160,357	-		AO353_14230	0.38	+0.1
3,160,357	-		AO353_14230	0.38	-2.9
3,160,357	-		AO353_14230	0.38	-0.7
3,160,528	+		AO353_14230	0.44	-1.4
3,160,528	+		AO353_14230	0.44	-1.9
3,160,528	+		AO353_14230	0.44	-0.7
3,160,529	-		AO353_14230	0.44	-1.3
3,160,529	-		AO353_14230	0.44	-0.4
3,160,529	-		AO353_14230	0.44	-0.9
3,160,529	-		AO353_14230	0.44	+0.0
3,160,529	-		AO353_14230	0.44	+1.0
3,160,529	-		AO353_14230	0.44	-0.9
3,160,754	-		AO353_14230	0.53	-1.4
3,160,897	+		AO353_14230	0.59	-2.1
3,161,262	+		AO353_14230	0.73	-0.4
3,161,347	+		AO353_14230	0.76	+0.1
3,161,347	+		AO353_14230	0.76	-0.8
3,161,347	+		AO353_14230	0.76	+0.2
3,161,347	+		AO353_14230	0.76	+1.0
3,161,348	-		AO353_14230	0.76	-0.6
3,161,348	-		AO353_14230	0.76	-0.9
3,161,348	-		AO353_14230	0.76	-2.9
3,161,357	-		AO353_14230	0.77	-1.2
3,161,505	+		AO353_14230	0.82	-0.1
3,161,505	+		AO353_14230	0.82	-2.8
3,161,506	-		AO353_14230	0.82	+0.7
3,161,506	-		AO353_14230	0.82	-0.6
3,161,523	+		AO353_14230	0.83	+0.7
3,161,523	+		AO353_14230	0.83	-1.4
3,161,524	-		AO353_14230	0.83	-0.2
3,161,524	-		AO353_14230	0.83	-3.2
3,161,788	-				-1.5
3,161,807	-				-2.3
3,161,818	+				-2.8
3,162,040	+				-2.2
3,162,040	+				+1.0
3,162,040	+				-0.3
3,162,057	+				+1.6
3,162,057	+				-1.0
3,162,057	+				-1.1
3,162,057	+				+0.9
3,162,101	+				+1.0
3,162,101	+				+1.0
3,162,101	+				+1.4
3,162,101	+				+0.6
3,162,101	+				+1.4
3,162,101	+				+1.1
3,162,571	+				-0.6
3,162,670	+				+2.9
3,162,673	+				-0.7
3,162,673	+				+0.4
3,162,673	+				-0.2
3,162,734	-				-2.4
3,162,759	+				-1.6
3,162,759	+				+1.8
3,162,760	-				-0.2
3,162,760	-				+1.1
3,162,760	-				-0.8
3,162,791	+				-1.3
3,162,791	+				-0.1
3,162,791	+				+0.6
3,162,791	+				-0.3
3,162,791	+				-0.3
3,162,791	+				+1.3
3,162,791	+				+0.4
3,162,791	+				+1.1
3,162,792	-				+2.5
3,162,792	-				-0.6
3,162,792	-				-0.4
3,162,792	-				+1.6
3,162,792	-				+0.7
3,162,792	-				-1.6
3,162,792	-				-2.1
3,162,792	-				+2.2
3,162,792	-				-1.8
3,162,869	+				+1.2
3,162,869	+				-2.3
3,162,869	+				-0.1
3,162,870	-				-1.1
3,162,870	-				-1.7
3,162,870	-				-1.4
3,162,870	-				+2.2
3,162,870	-				-0.4
3,162,894	-				-2.1
3,162,905	+				+2.2
3,162,905	+				-0.9
3,162,905	+				+2.0
3,162,905	+				+1.2
3,162,906	-				-2.3
3,162,906	-				+1.3
3,162,906	-				+0.0
3,162,937	+		AO353_14255	0.11	-1.4
3,162,937	+		AO353_14255	0.11	-1.9
3,162,938	-		AO353_14255	0.11	-1.9
3,162,938	-		AO353_14255	0.11	-1.7