Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_13820

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
3,068,588	+				-1.0
3,068,588	+				-1.9
3,068,588	+				-1.0
3,068,588	+				-2.0
3,068,589	-				+1.1
3,068,589	-				+0.3
3,068,707	+		AO353_13815	0.12	+1.9
3,068,707	+		AO353_13815	0.12	-1.9
3,068,707	+		AO353_13815	0.12	-0.1
3,068,707	+		AO353_13815	0.12	-0.8
3,068,707	+		AO353_13815	0.12	+1.2
3,068,708	-		AO353_13815	0.12	+0.9
3,068,708	-		AO353_13815	0.12	-1.5
3,068,731	+		AO353_13815	0.15	-0.9
3,068,731	+		AO353_13815	0.15	+3.2
3,068,731	+		AO353_13815	0.15	-0.7
3,068,732	-		AO353_13815	0.15	-1.4
3,068,932	+		AO353_13815	0.38	-0.7
3,068,932	+		AO353_13815	0.38	-2.1
3,068,933	-		AO353_13815	0.38	-1.7
3,068,933	-		AO353_13815	0.38	+2.3
3,069,014	+		AO353_13815	0.47	-1.4
3,069,015	-		AO353_13815	0.47	-2.4
3,069,015	-		AO353_13815	0.47	-0.2
3,069,015	-		AO353_13815	0.47	-2.3
3,069,015	-		AO353_13815	0.47	+0.5
3,069,087	+		AO353_13815	0.55	-2.2
3,069,087	+		AO353_13815	0.55	-1.4
3,069,087	+		AO353_13815	0.55	-1.7
3,069,087	+		AO353_13815	0.55	+0.9
3,069,088	-		AO353_13815	0.55	-0.7
3,069,088	-		AO353_13815	0.55	-0.2
3,069,088	-		AO353_13815	0.55	+2.8
3,069,088	-		AO353_13815	0.55	-1.1
3,069,160	+		AO353_13815	0.64	-1.8
3,069,160	+		AO353_13815	0.64	-2.3
3,069,161	-		AO353_13815	0.64	-0.9
3,069,161	-		AO353_13815	0.64	-0.1
3,069,161	-		AO353_13815	0.64	-1.4
3,069,189	+		AO353_13815	0.67	+1.8
3,069,189	+		AO353_13815	0.67	+1.2
3,069,189	+		AO353_13815	0.67	+3.0
3,069,242	+		AO353_13815	0.73	+0.0
3,069,242	+		AO353_13815	0.73	-0.1
3,069,264	+		AO353_13815	0.75	-2.2
3,069,415	+				-2.0
3,069,415	+				+0.1
3,069,415	+				-0.1
3,069,415	+				-0.2
3,069,415	+				-0.8
3,069,415	+				-1.3
3,069,415	+				+0.6
3,069,415	+				-0.3
3,069,415	+				-2.0
3,069,416	-				-2.2
3,069,416	-				+2.6
3,069,416	-				-1.5
3,069,416	-				-0.1
3,069,416	-				-1.5
3,069,416	-				+1.2
3,069,416	-				-0.5
3,069,416	-				+2.9
3,069,616	+				+0.5
3,069,616	+				-2.6
3,069,616	+				+1.8
3,069,616	+				-0.3
3,069,616	+				-2.8
3,069,616	+				+2.3
3,069,616	+				+2.1
3,069,616	+				-0.5
3,069,616	+				+1.3
3,069,616	+				-0.5
3,069,616	+				+1.5
3,069,616	+				+1.3
3,069,616	+				-0.4
3,069,616	+				+0.2
3,069,616	+				-2.1
3,069,616	+				-1.9
3,069,616	+				+1.0
3,069,616	+				-0.9
3,069,616	+				-2.5
3,069,616	+				+1.1
3,069,617	-				+1.2
3,069,617	-				-1.3
3,069,617	-				+1.0
3,069,617	-				-0.1
3,069,617	-				-0.7
3,069,617	-				+0.9
3,069,617	-				+0.0
3,069,617	-				-1.0
3,069,617	-				-0.5
3,069,617	-				-1.2
3,069,617	-				+0.6
3,069,617	-				+2.6
3,069,858	+		AO353_13820	0.28	-2.2
3,069,858	+		AO353_13820	0.28	-1.3
3,069,859	-		AO353_13820	0.28	+1.5
3,069,859	-		AO353_13820	0.28	+2.8
3,070,098	-		AO353_13820	0.47	+1.5
3,070,211	+		AO353_13820	0.56	+0.7
3,070,211	+		AO353_13820	0.56	+2.2
3,070,211	+		AO353_13820	0.56	-0.4
3,070,211	+		AO353_13820	0.56	-2.2
3,070,211	+		AO353_13820	0.56	+0.5
3,070,211	+		AO353_13820	0.56	+0.8
3,070,211	+		AO353_13820	0.56	-0.8
3,070,212	-		AO353_13820	0.56	-0.1
3,070,212	-		AO353_13820	0.56	-0.3
3,070,212	-		AO353_13820	0.56	-1.9
3,070,212	-		AO353_13820	0.56	+1.4
3,070,212	-		AO353_13820	0.56	+0.5
3,070,422	+		AO353_13820	0.72	-1.0
3,070,422	+		AO353_13820	0.72	+1.2
3,070,422	+		AO353_13820	0.72	-0.5
3,070,422	+		AO353_13820	0.72	+0.9
3,070,422	+		AO353_13820	0.72	+1.8
3,070,422	+		AO353_13820	0.72	+2.5
3,070,423	-		AO353_13820	0.72	+2.3
3,070,423	-		AO353_13820	0.72	+1.4
3,070,423	-		AO353_13820	0.72	+0.0
3,070,423	-		AO353_13820	0.72	+0.3
3,070,423	-		AO353_13820	0.72	-1.0
3,070,423	-		AO353_13820	0.72	-1.1
3,070,423	-		AO353_13820	0.72	+0.5
3,070,423	-				+1.5
3,070,423	-		AO353_13820	0.72	-0.2
3,070,594	+		AO353_13820	0.86	+2.0
3,070,594	+		AO353_13820	0.86	+1.5
3,070,594	+		AO353_13820	0.86	-1.4
3,070,595	-		AO353_13820	0.86	-0.5
3,070,595	-		AO353_13820	0.86	+0.5
3,070,595	-		AO353_13820	0.86	-0.5
3,070,687	+				+1.5
3,070,687	+				+0.2
3,070,687	+				-0.9
3,070,687	+				+3.1
3,070,687	+				+0.8
3,070,687	+				-0.8
3,070,688	-				-0.4
3,070,688	-				-1.4
3,070,688	-				+0.2
3,070,688	-				-1.9
3,070,688	-				+0.1
3,070,688	-				-3.3
3,070,688	-				-0.2
3,070,688	-				-1.3
3,070,688	-				-1.4
3,070,688	-				-1.0
3,070,688	-				-2.5
3,070,688	-				-0.1
3,070,948	-		AO353_13825	0.15	-0.4
3,071,023	-		AO353_13825	0.21	+1.1
3,071,127	+		AO353_13825	0.30	+0.4
3,071,127	+		AO353_13825	0.30	-1.3
3,071,127	+		AO353_13825	0.30	-0.5
3,071,128	-		AO353_13825	0.30	-1.3
3,071,128	-		AO353_13825	0.30	+4.6
3,071,135	+		AO353_13825	0.30	+0.7
3,071,135	+		AO353_13825	0.30	-0.7
3,071,135	+		AO353_13825	0.30	-0.2
3,071,135	+		AO353_13825	0.30	-1.1
3,071,136	-		AO353_13825	0.31	+0.2
3,071,136	-		AO353_13825	0.31	-0.2
3,071,136	-		AO353_13825	0.31	+4.3
3,071,244	+		AO353_13825	0.40	+1.7
3,071,244	+		AO353_13825	0.40	+0.5
3,071,244	+		AO353_13825	0.40	+2.3
3,071,244	+		AO353_13825	0.40	-0.8
3,071,244	+		AO353_13825	0.40	-1.0
3,071,244	+		AO353_13825	0.40	-1.8
3,071,244	+		AO353_13825	0.40	+2.2
3,071,244	+		AO353_13825	0.40	+1.2
3,071,244	+		AO353_13825	0.40	-0.3
3,071,244	+		AO353_13825	0.40	+1.0
3,071,244	+		AO353_13825	0.40	-0.1
3,071,244	+		AO353_13825	0.40	-0.9
3,071,244	+		AO353_13825	0.40	-2.3
3,071,244	+		AO353_13825	0.40	-0.1
3,071,244	+		AO353_13825	0.40	+2.2
3,071,244	+		AO353_13825	0.40	+0.0
3,071,244	+		AO353_13825	0.40	+2.0
3,071,244	+		AO353_13825	0.40	-0.7
3,071,244	+		AO353_13825	0.40	-0.8
3,071,245	-		AO353_13825	0.40	-1.2
3,071,245	-		AO353_13825	0.40	-0.1
3,071,245	-		AO353_13825	0.40	+0.4
3,071,245	-		AO353_13825	0.40	+0.9
3,071,245	-		AO353_13825	0.40	-1.3
3,071,245	-		AO353_13825	0.40	+0.6
3,071,245	-		AO353_13825	0.40	-3.2
3,071,245	-		AO353_13825	0.40	-0.4
3,071,245	-		AO353_13825	0.40	-0.2
3,071,245	-		AO353_13825	0.40	-1.7
3,071,245	-		AO353_13825	0.40	-0.9
3,071,245	-		AO353_13825	0.40	-0.5
3,071,245	-		AO353_13825	0.40	+1.2
3,071,245	-		AO353_13825	0.40	+3.3
3,071,245	-		AO353_13825	0.40	-1.8
3,071,245	-		AO353_13825	0.40	-0.0
3,071,245	-		AO353_13825	0.40	-2.1
3,071,245	-		AO353_13825	0.40	-0.5
3,071,245	-		AO353_13825	0.40	-0.3
3,071,292	+		AO353_13825	0.44	-0.3
3,071,293	-		AO353_13825	0.44	+2.5
3,071,408	+		AO353_13825	0.53	-1.9
3,071,408	+		AO353_13825	0.53	+2.3
3,071,604	-		AO353_13825	0.70	-0.5
3,071,637	+		AO353_13825	0.73	+2.5
3,071,771	+		AO353_13825	0.84	-2.8
3,071,771	+		AO353_13825	0.84	+0.6
3,071,771	+		AO353_13825	0.84	-1.8
3,071,771	+		AO353_13825	0.84	-0.6
3,071,771	+		AO353_13825	0.84	+0.5
3,071,771	+		AO353_13825	0.84	-0.8
3,071,771	+		AO353_13825	0.84	-1.6
3,071,771	+		AO353_13825	0.84	+1.5
3,071,771	+		AO353_13825	0.84	+2.8
3,071,771	+		AO353_13825	0.84	+0.1
3,071,771	+		AO353_13825	0.84	-0.3
3,071,772	-		AO353_13825	0.84	+0.6
3,071,772	-		AO353_13825	0.84	-0.2
3,071,772	-		AO353_13825	0.84	+1.5
3,071,772	-		AO353_13825	0.84	-1.4
3,071,772	-		AO353_13825	0.84	-0.4
3,071,772	-		AO353_13825	0.84	-1.1
3,071,772	-		AO353_13825	0.84	-0.4