Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_11800

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
2,601,849	+		AO353_11790	0.34	+1.7
2,601,849	+		AO353_11790	0.34	+1.8
2,601,849	+		AO353_11790	0.34	-1.8
2,601,849	+		AO353_11790	0.34	+0.2
2,601,850	-		AO353_11790	0.34	-0.4
2,601,850	-		AO353_11790	0.34	+1.4
2,601,850	-		AO353_11790	0.34	+2.3
2,601,850	-		AO353_11790	0.34	-1.4
2,601,850	-		AO353_11790	0.34	+2.3
2,601,850	-		AO353_11790	0.34	-0.6
2,601,926	-		AO353_11790	0.60	-1.2
2,601,926	-		AO353_11790	0.60	+2.8
2,601,926	-		AO353_11790	0.60	-0.5
2,602,021	+				+0.7
2,602,021	+				-0.5
2,602,033	+				+0.7
2,602,033	+				+0.5
2,602,033	+				+1.4
2,602,033	+				+1.9
2,602,033	+				-2.1
2,602,033	+				-1.5
2,602,034	-				-2.6
2,602,034	-				-1.5
2,602,034	-				+0.3
2,602,058	+				-1.2
2,602,058	+				+0.2
2,602,058	+				+1.3
2,602,059	-				+0.1
2,602,059	-				+0.0
2,602,059	-				-0.2
2,602,059	-				-0.6
2,602,131	+				+3.1
2,602,132	-				-0.2
2,602,132	-				-1.0
2,602,133	+				-0.3
2,602,133	+				+1.9
2,602,133	+				-2.3
2,602,133	+				-0.3
2,602,133	+				-0.5
2,602,133	+				+2.0
2,602,133	+				+0.8
2,602,133	+				-2.6
2,602,133	+				+0.1
2,602,133	+				-1.5
2,602,133	+				+0.7
2,602,133	+				+2.4
2,602,133	+				-1.2
2,602,133	+				-0.2
2,602,133	+				+1.6
2,602,133	+				+0.2
2,602,133	+				+1.4
2,602,133	+				-0.5
2,602,133	+				-0.8
2,602,133	+				+0.1
2,602,133	+				-0.2
2,602,133	+				-2.0
2,602,133	+				-0.3
2,602,133	+				-0.4
2,602,133	+				+0.9
2,602,133	+				+0.5
2,602,133	+				+0.0
2,602,133	+				+0.5
2,602,133	+				+1.6
2,602,133	+				-1.3
2,602,133	+				-0.3
2,602,133	+				-0.8
2,602,133	+				+3.2
2,602,133	+				-0.3
2,602,133	+				+1.6
2,602,133	+				+0.2
2,602,134	-				-1.3
2,602,134	-				+0.7
2,602,134	-				-1.5
2,602,134	-				-0.4
2,602,134	-				+1.7
2,602,134	-				+0.2
2,602,134	-				+0.5
2,602,134	-				+2.3
2,602,134	-				+0.7
2,602,134	-				-0.8
2,602,134	-				+2.0
2,602,134	-				-0.5
2,602,134	-				-2.6
2,602,134	-				+0.8
2,602,134	-				+0.7
2,602,134	-				+0.9
2,602,134	-				-1.0
2,602,134	-				-0.7
2,602,134	-				+0.8
2,602,134	-				+0.7
2,602,134	-				-0.7
2,602,134	-				-0.3
2,602,134	-				+1.8
2,602,134	-				+0.2
2,602,134	-				+0.4
2,602,134	-				-1.4
2,602,134	-				-0.7
2,602,134	-				-0.4
2,602,134	-				+1.1
2,602,134	-				-0.8
2,602,134	-				+3.0
2,602,181	+				+0.1
2,602,181	+				-1.7
2,602,181	+				-0.7
2,602,181	+				-0.7
2,602,181	+				+1.6
2,602,181	+				+0.3
2,602,182	-				-0.7
2,602,182	-				-1.0
2,602,182	-				+0.6
2,602,234	+				+2.8
2,602,234	+				-1.0
2,602,234	+				-0.2
2,602,234	+				+1.0
2,602,234	+				+1.8
2,602,234	+				+1.5
2,602,235	-				-2.1
2,602,235	-				+0.6
2,602,252	+				+1.5
2,602,252	+				+0.9
2,602,253	-				-0.7
2,602,312	+		AO353_11795	0.22	+0.3
2,602,312	+		AO353_11795	0.22	-0.2
2,602,312	+		AO353_11795	0.22	+0.8
2,602,312	+		AO353_11795	0.22	-0.9
2,602,312	+		AO353_11795	0.22	+0.1
2,602,312	+		AO353_11795	0.22	-0.2
2,602,313	-		AO353_11795	0.22	+2.2
2,602,313	-		AO353_11795	0.22	+1.6
2,602,372	+		AO353_11795	0.43	-1.9
2,602,373	-		AO353_11795	0.43	+0.1
2,602,373	-		AO353_11795	0.43	+1.1
2,602,373	-		AO353_11795	0.43	-1.0
2,602,373	-		AO353_11795	0.43	-1.1
2,602,373	-		AO353_11795	0.43	-2.2
2,602,480	+		AO353_11795	0.81	-1.9
2,602,480	+		AO353_11795	0.81	-0.2
2,602,480	+		AO353_11795	0.81	-1.0
2,602,480	+		AO353_11795	0.81	-2.4
2,602,480	+		AO353_11795	0.81	-0.6
2,602,480	+		AO353_11795	0.81	-2.3
2,602,480	+		AO353_11795	0.81	+0.4
2,602,480	+		AO353_11795	0.81	-0.6
2,602,480	+		AO353_11795	0.81	-0.7
2,602,481	-		AO353_11795	0.82	+1.6
2,602,481	-		AO353_11795	0.82	-0.1
2,602,481	-		AO353_11795	0.82	-1.6
2,602,481	-		AO353_11795	0.82	-0.3
2,602,512	-				+1.3
2,602,512	-				-1.1
2,602,546	+				-2.3
2,602,546	+				+0.8
2,602,547	-				+2.2
2,602,605	+				+1.4
2,602,605	+				-1.5
2,602,605	+				-2.1
2,602,605	+				+1.0
2,602,606	-				-1.1
2,602,606	-				-0.9
2,602,606	-				-0.1
2,602,606	-				-1.5
2,602,606	-				-1.4
2,602,607	+				-0.3
2,602,607	+				+0.2
2,602,607	+				-1.0
2,602,607	+				-0.3
2,602,608	-				-1.2
2,602,608	-				-0.4
2,602,608	-				+1.6
2,602,608	-				+0.3
2,602,666	+				-1.3
2,602,666	+				-1.5
2,602,666	+				-0.4
2,602,666	+				+1.7
2,602,666	+				-0.4
2,602,666	+				+0.1
2,602,666	+				-2.3
2,602,667	-				-0.8
2,602,667	-				-0.7
2,602,667	-				-1.4
2,602,667	-				+0.2
2,602,667	-				+0.4
2,602,667	-				-0.4
2,602,667	-				+0.2
2,602,667	-				+2.8
2,602,667	-				+3.0
2,602,667	-				+0.2
2,602,667	-				-1.2
2,602,676	+				-2.4
2,602,676	+				+1.7
2,602,677	-				-2.0
2,602,677	-				+0.3
2,602,677	-				-1.9
2,602,689	+				-0.3
2,602,690	-				+2.6
2,602,690	-				-1.5
2,602,724	+				-0.4
2,602,740	+				+0.9
2,602,741	-				+0.8
2,602,827	+				-1.3
2,602,827	+				-0.6
2,602,827	+				-0.7
2,602,828	-				+1.9
2,602,828	-				+1.4
2,602,828	-				+0.5
2,602,828	-				-0.5
2,602,837	+				-1.0
2,602,837	+				+1.4
2,602,837	+				-0.4
2,602,837	+				-1.0
2,602,837	+				+1.8
2,602,837	+				-1.2
2,602,837	+				+0.7
2,602,837	+				-1.3
2,602,837	+				-1.2
2,602,837	+				-0.2
2,602,838	-				+0.3
2,602,838	-				-0.4
2,602,838	-				-0.4
2,602,838	-				+0.3
2,602,838	-				-0.7
2,602,838	-				-1.4
2,602,838	-				+1.0
2,602,838	-				-1.1
2,602,838	-				+0.9
2,602,841	+				-1.0
2,602,841	+				-2.4
2,602,841	+				+0.1
2,602,842	-				-0.6
2,602,856	+				+1.2
2,602,856	+				-1.3
2,602,856	+				+2.5
2,602,856	+				-0.2
2,602,857	-				+1.0
2,602,857	-				+0.3
2,602,857	-				+0.5
2,603,010	-		AO353_11800	0.14	+2.0
2,603,133	+		AO353_11800	0.25	-0.6
2,603,133	+				+0.1
2,603,133	+		AO353_11800	0.25	-0.0
2,603,133	+		AO353_11800	0.25	+0.1
2,603,133	+		AO353_11800	0.25	-1.1
2,603,133	+		AO353_11800	0.25	-0.4
2,603,133	+		AO353_11800	0.25	-0.2
2,603,134	-		AO353_11800	0.25	-0.8
2,603,134	-		AO353_11800	0.25	-1.7
2,603,134	-		AO353_11800	0.25	+1.8
2,603,134	-		AO353_11800	0.25	+2.5
2,603,134	-		AO353_11800	0.25	+0.0
2,603,134	-		AO353_11800	0.25	+3.6
2,603,134	-		AO353_11800	0.25	+2.5
2,603,134	-		AO353_11800	0.25	-0.6
2,603,219	+		AO353_11800	0.32	+0.3
2,603,219	+		AO353_11800	0.32	+0.0
2,603,220	-		AO353_11800	0.32	+1.0
2,603,220	-		AO353_11800	0.32	-0.7
2,603,244	+		AO353_11800	0.34	-1.1
2,603,244	+		AO353_11800	0.34	+3.7
2,603,244	+		AO353_11800	0.34	-0.6
2,603,244	+		AO353_11800	0.34	+0.9
2,603,244	+		AO353_11800	0.34	-2.1
2,603,244	+		AO353_11800	0.34	+3.0
2,603,245	-		AO353_11800	0.34	+1.0
2,603,245	-		AO353_11800	0.34	-0.6
2,603,245	-		AO353_11800	0.34	+0.3
2,603,245	-		AO353_11800	0.34	-0.3
2,603,245	-		AO353_11800	0.34	-1.4
2,603,245	-		AO353_11800	0.34	-1.4
2,603,245	-		AO353_11800	0.34	+2.4
2,603,245	-		AO353_11800	0.34	+2.1
2,603,245	-		AO353_11800	0.34	+1.6
2,603,301	+		AO353_11800	0.39	-0.2
2,603,301	+		AO353_11800	0.39	-1.6
2,603,301	+		AO353_11800	0.39	-1.2
2,603,301	+		AO353_11800	0.39	-1.5
2,603,301	+		AO353_11800	0.39	+1.7
2,603,302	-		AO353_11800	0.39	-2.2
2,603,302	-		AO353_11800	0.39	+0.6
2,603,302	-		AO353_11800	0.39	-2.3
2,603,302	-		AO353_11800	0.39	-0.0
2,603,302	-		AO353_11800	0.39	-0.5
2,603,349	+		AO353_11800	0.43	+1.5
2,603,349	+		AO353_11800	0.43	-0.7
2,603,349	+		AO353_11800	0.43	+0.7
2,603,349	+		AO353_11800	0.43	-0.3
2,603,349	+		AO353_11800	0.43	+0.4
2,603,349	+		AO353_11800	0.43	-1.5
2,603,349	+		AO353_11800	0.43	+3.5
2,603,349	+		AO353_11800	0.43	-0.4
2,603,349	+		AO353_11800	0.43	+3.0
2,603,350	-		AO353_11800	0.43	+0.5
2,603,350	-		AO353_11800	0.43	-0.4
2,603,350	-		AO353_11800	0.43	+2.5
2,603,350	-		AO353_11800	0.43	+3.0
2,603,350	-		AO353_11800	0.43	-0.2
2,603,350	-		AO353_11800	0.43	-0.3
2,603,355	+				+1.0
2,603,356	-		AO353_11800	0.44	-1.2
2,603,433	+		AO353_11800	0.50	+0.3
2,603,433	+		AO353_11800	0.50	-0.0
2,603,433	+		AO353_11800	0.50	-2.0
2,603,433	+		AO353_11800	0.50	+0.0
2,603,433	+		AO353_11800	0.50	+0.5
2,603,433	+		AO353_11800	0.50	+0.4
2,603,433	+		AO353_11800	0.50	-2.0
2,603,433	+		AO353_11800	0.50	+1.0
2,603,433	+		AO353_11800	0.50	-1.9
2,603,433	+		AO353_11800	0.50	+0.7
2,603,434	-		AO353_11800	0.50	-2.2
2,603,434	-		AO353_11800	0.50	+0.7
2,603,434	-		AO353_11800	0.50	-2.2
2,603,434	-		AO353_11800	0.50	-1.6
2,603,434	-		AO353_11800	0.50	-0.4
2,603,434	-		AO353_11800	0.50	+1.0
2,603,434	-		AO353_11800	0.50	+0.5
2,603,434	-		AO353_11800	0.50	+1.7
2,603,460	+		AO353_11800	0.53	-0.7
2,603,460	+		AO353_11800	0.53	+1.1
2,603,460	+		AO353_11800	0.53	-0.5
2,603,460	+		AO353_11800	0.53	-0.8
2,603,460	+		AO353_11800	0.53	+2.3
2,603,460	+		AO353_11800	0.53	-0.2
2,603,460	+		AO353_11800	0.53	+1.6
2,603,461	-		AO353_11800	0.53	+4.6
2,603,461	-		AO353_11800	0.53	+1.4
2,603,461	-		AO353_11800	0.53	+2.2
2,603,461	-		AO353_11800	0.53	+1.5
2,603,461	-		AO353_11800	0.53	+1.1
2,603,461	-		AO353_11800	0.53	+0.5
2,603,461	-		AO353_11800	0.53	-0.8
2,603,461	-		AO353_11800	0.53	+2.1
2,603,461	-		AO353_11800	0.53	-1.0
2,603,461	-		AO353_11800	0.53	+1.0
2,603,461	-		AO353_11800	0.53	-0.3
2,603,461	-		AO353_11800	0.53	+1.6
2,603,463	+		AO353_11800	0.53	+1.4
2,603,463	+		AO353_11800	0.53	-1.2
2,603,463	+		AO353_11800	0.53	+0.3
2,603,463	+		AO353_11800	0.53	+0.3
2,603,463	+		AO353_11800	0.53	-0.0
2,603,463	+		AO353_11800	0.53	+0.5
2,603,463	+		AO353_11800	0.53	-2.4
2,603,463	+		AO353_11800	0.53	+0.2
2,603,463	+		AO353_11800	0.53	+0.8
2,603,463	+		AO353_11800	0.53	-2.6
2,603,463	+		AO353_11800	0.53	-1.0
2,603,463	+		AO353_11800	0.53	+1.5
2,603,463	+		AO353_11800	0.53	+0.5
2,603,463	+		AO353_11800	0.53	-1.0
2,603,464	-		AO353_11800	0.53	-1.8
2,603,464	-		AO353_11800	0.53	-0.4
2,603,464	-		AO353_11800	0.53	+0.9
2,603,464	-		AO353_11800	0.53	+1.3
2,603,464	-		AO353_11800	0.53	+2.0
2,603,464	-		AO353_11800	0.53	+1.7
2,603,464	-		AO353_11800	0.53	-1.6
2,603,464	-		AO353_11800	0.53	-0.0
2,603,464	-		AO353_11800	0.53	+0.7
2,603,464	-		AO353_11800	0.53	+0.6
2,603,464	-		AO353_11800	0.53	-1.0
2,603,500	+		AO353_11800	0.56	-0.2
2,603,500	+		AO353_11800	0.56	-2.8
2,603,500	+		AO353_11800	0.56	-0.8
2,603,501	-		AO353_11800	0.56	-1.0
2,603,501	-		AO353_11800	0.56	+0.2
2,603,540	+		AO353_11800	0.59	-0.3
2,603,540	+		AO353_11800	0.59	+1.7
2,603,540	+		AO353_11800	0.59	+0.5
2,603,540	+		AO353_11800	0.59	+3.3
2,603,540	+		AO353_11800	0.59	+3.3
2,603,540	+		AO353_11800	0.59	-1.0
2,603,540	+		AO353_11800	0.59	-1.9
2,603,540	+		AO353_11800	0.59	-0.8
2,603,540	+		AO353_11800	0.59	+0.4
2,603,541	-		AO353_11800	0.59	+1.0
2,603,541	-		AO353_11800	0.59	-1.5
2,603,541	-		AO353_11800	0.59	-0.0
2,603,541	-		AO353_11800	0.59	-0.9
2,603,541	-		AO353_11800	0.59	-0.6
2,603,575	+		AO353_11800	0.62	+1.8
2,603,575	+		AO353_11800	0.62	+0.5
2,603,575	+		AO353_11800	0.62	-1.9
2,603,575	+		AO353_11800	0.62	-0.6
2,603,575	+		AO353_11800	0.62	+2.1
2,603,576	-		AO353_11800	0.62	-0.9
2,603,576	-		AO353_11800	0.62	+1.2
2,603,576	-		AO353_11800	0.62	-0.8
2,603,688	+		AO353_11800	0.72	-0.4
2,603,689	-		AO353_11800	0.72	-0.3
2,603,724	+		AO353_11800	0.75	-1.1
2,603,724	+		AO353_11800	0.75	-1.0
2,603,724	+		AO353_11800	0.75	+1.0
2,603,724	+		AO353_11800	0.75	+0.3
2,603,725	-		AO353_11800	0.75	+0.6
2,603,766	+		AO353_11800	0.79	+0.5
2,603,766	+		AO353_11800	0.79	-1.2
2,603,766	+		AO353_11800	0.79	+0.2
2,603,766	+		AO353_11800	0.79	+0.1
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2,603,767	-		AO353_11800	0.79	+0.5
2,603,767	-		AO353_11800	0.79	+0.6
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2,603,886	+		AO353_11800	0.89	+1.1
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2,603,886	+		AO353_11800	0.89	+2.3
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2,603,890	-		AO353_11800	0.89	+0.3
2,603,890	-		AO353_11800	0.89	-1.8
2,603,903	+				+0.1
2,603,903	+				-0.9
2,603,903	+				+1.9
2,603,904	-				-0.1
2,603,904	-				-0.2
2,603,904	-				+0.2
2,603,907	+				+3.1
2,603,907	+				-1.3
2,603,907	+				+1.0
2,603,907	+				+0.0
2,603,907	+				-0.7
2,603,907	+				+0.1
2,603,907	+				-1.2
2,603,907	+				-0.6
2,603,907	+				-1.8
2,603,908	-				-0.9
2,603,908	-				-0.7
2,603,908	-				+1.8
2,603,908	-				-1.3
2,603,908	-				+1.0
2,603,908	-				+1.3
2,603,908	-				+2.0
2,603,947	-				-2.0
2,603,947	-				+1.0
2,603,982	+				+1.3
2,603,982	+				+0.1
2,603,982	+				-1.0
2,603,982	+				-1.0
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2,603,983	-				-0.0
2,603,983	-				-1.0
2,603,983	-				-0.2
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2,604,072	+				-0.4
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2,604,072	+				-1.2
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2,604,073	-				-0.2
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2,604,103	-				-0.1
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2,604,382	+		AO353_11805	0.26	+1.9
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2,604,493	+		AO353_11805	0.36	+1.5
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2,604,493	+		AO353_11805	0.36	-2.4
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2,604,925	+		AO353_11805	0.74	-2.1
2,604,925	+		AO353_11805	0.74	+0.1
2,604,926	-		AO353_11805	0.74	-1.2
2,604,926	-		AO353_11805	0.74	+1.6
2,604,949	+		AO353_11805	0.76	+1.8
2,604,950	-		AO353_11805	0.76	-1.0
2,604,950	-		AO353_11805	0.76	-1.5