Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_11520

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
2,545,359	+		AO353_11515	0.62	+1.5
2,545,360	-		AO353_11515	0.63	-2.6
2,545,401	+		AO353_11515	0.66	+1.5
2,545,402	-		AO353_11515	0.66	+0.8
2,545,449	+		AO353_11515	0.70	-0.6
2,545,449	+		AO353_11515	0.70	+0.7
2,545,449	+		AO353_11515	0.70	+0.5
2,545,450	-		AO353_11515	0.70	-0.8
2,545,450	-		AO353_11515	0.70	+1.0
2,545,450	-		AO353_11515	0.70	-1.5
2,545,581	+		AO353_11515	0.81	+2.1
2,545,581	+		AO353_11515	0.81	-2.1
2,545,581	+		AO353_11515	0.81	+1.5
2,545,582	-		AO353_11515	0.81	-0.8
2,545,582	-		AO353_11515	0.81	+0.2
2,545,599	-		AO353_11515	0.82	+1.0
2,545,647	+		AO353_11515	0.86	-1.9
2,545,647	+		AO353_11515	0.86	-1.7
2,545,648	-		AO353_11515	0.86	+0.1
2,545,648	-		AO353_11515	0.86	+0.1
2,545,648	-		AO353_11515	0.86	-0.8
2,545,668	+		AO353_11515	0.88	+0.2
2,545,668	+		AO353_11515	0.88	+2.6
2,545,668	+		AO353_11515	0.88	+0.4
2,545,668	+		AO353_11515	0.88	-1.5
2,545,669	-		AO353_11515	0.88	-1.5
2,545,669	-		AO353_11515	0.88	+1.0
2,545,669	-		AO353_11515	0.88	+2.0
2,545,669	-		AO353_11515	0.88	-1.0
2,545,669	-		AO353_11515	0.88	-0.7
2,545,669	-		AO353_11515	0.88	-0.0
2,545,870	+				-1.7
2,545,870	+				+2.2
2,545,870	+				+1.7
2,545,870	+				+1.0
2,545,871	-				-3.1
2,545,871	-				-1.8
2,545,871	-				+2.2
2,545,871	-				-0.3
2,545,956	+				+2.1
2,545,956	+				+0.5
2,545,956	+				+2.1
2,545,956	+				-0.5
2,545,956	+				+0.0
2,545,957	-				-0.8
2,545,957	-				-2.8
2,545,957	-				+0.3
2,545,957	-				+2.6
2,545,957	-				+0.5
2,545,988	+				-0.7
2,545,988	+				+0.7
2,545,988	+				+1.3
2,545,988	+				+3.1
2,545,988	+				+1.2
2,545,988	+				+3.4
2,545,988	+				-0.2
2,545,988	+				+0.8
2,545,988	+				+0.8
2,545,988	+				+1.5
2,545,989	-				-0.1
2,545,989	-				+0.1
2,545,989	-				-1.8
2,545,989	-				-0.5
2,545,989	-				+1.8
2,545,989	-				+3.2
2,545,989	-				-2.5
2,546,012	+				+2.6
2,546,012	+				+1.0
2,546,013	-				-1.5
2,546,013	-				+1.5
2,546,285	+		AO353_11520	0.34	+0.8
2,546,285	+		AO353_11520	0.34	-1.7
2,546,285	+		AO353_11520	0.34	+5.4
2,546,285	+		AO353_11520	0.34	+3.2
2,546,285	+		AO353_11520	0.34	-1.7
2,546,285	+		AO353_11520	0.34	-1.0
2,546,285	+		AO353_11520	0.34	+1.8
2,546,285	+		AO353_11520	0.34	+3.5
2,546,285	+		AO353_11520	0.34	+2.3
2,546,285	+		AO353_11520	0.34	+3.2
2,546,285	+		AO353_11520	0.34	+2.6
2,546,285	+		AO353_11520	0.34	+4.7
2,546,286	-		AO353_11520	0.34	-1.0
2,546,286	-		AO353_11520	0.34	-1.6
2,546,286	-		AO353_11520	0.34	+0.9
2,546,286	-		AO353_11520	0.34	-0.2
2,546,286	-		AO353_11520	0.34	-0.9
2,546,286	-		AO353_11520	0.34	-0.0
2,546,286	-		AO353_11520	0.34	+0.4
2,546,286	-		AO353_11520	0.34	-0.2
2,546,494	+		AO353_11520	0.55	+1.6
2,546,495	-		AO353_11520	0.56	-3.0
2,546,585	+		AO353_11520	0.65	+1.6
2,546,642	+		AO353_11520	0.70	+3.8
2,546,642	+		AO353_11520	0.70	+3.4
2,546,642	+		AO353_11520	0.70	+0.5
2,546,642	+		AO353_11520	0.70	+1.7
2,546,643	-		AO353_11520	0.71	+0.2
2,546,643	-		AO353_11520	0.71	-0.8
2,546,643	-		AO353_11520	0.71	-0.2
2,546,643	-		AO353_11520	0.71	-0.3
2,546,684	+		AO353_11520	0.75	+0.5
2,546,685	-		AO353_11520	0.75	-1.0
2,546,685	-		AO353_11520	0.75	+0.7
2,546,685	-		AO353_11520	0.75	-0.5
2,546,729	+		AO353_11520	0.79	+3.9
2,546,729	+		AO353_11520	0.79	+1.3
2,546,729	+		AO353_11520	0.79	+4.5
2,546,729	+		AO353_11520	0.79	+4.1
2,546,730	-		AO353_11520	0.79	-0.5
2,546,744	+		AO353_11520	0.81	-0.2
2,546,744	+		AO353_11520	0.81	+6.3
2,546,744	+		AO353_11520	0.81	+0.2
2,546,744	+		AO353_11520	0.81	+2.3
2,546,745	-		AO353_11520	0.81	+2.0
2,546,745	-		AO353_11520	0.81	+0.6
2,546,745	-		AO353_11520	0.81	+1.0
2,546,745	-		AO353_11520	0.81	-0.2
2,546,745	-		AO353_11520	0.81	+2.4
2,546,745	-		AO353_11520	0.81	-0.3
2,546,745	-		AO353_11520	0.81	-0.4
2,546,745	-		AO353_11520	0.81	-0.8
2,546,908	+				+5.6
2,546,908	+				+6.0
2,546,909	-				-1.1
2,546,909	-				+0.1
2,546,925	+				+5.9
2,546,925	+				+7.4
2,546,926	-				+1.4
2,546,926	-				+2.2
2,546,926	-				+1.1
2,547,017	+				+1.3
2,547,018	-				+0.1
2,547,033	+				+5.3
2,547,033	+				+4.7
2,547,033	+				+2.4
2,547,033	+				+6.3
2,547,033	+				+3.8
2,547,033	+				+6.5
2,547,033	+				+6.6
2,547,033	+				+5.3
2,547,033	+				+5.5
2,547,033	+				+1.1
2,547,033	+				+6.1
2,547,033	+				+8.7
2,547,033	+				+5.7
2,547,033	+				+7.3
2,547,033	+				+5.8
2,547,033	+				+6.2
2,547,033	+				+7.3
2,547,033	+				+6.3
2,547,034	-				+0.5
2,547,034	-				+0.1
2,547,034	-				+2.8
2,547,034	-				+1.0
2,547,034	-				-1.2
2,547,034	-				-0.2
2,547,034	-				-2.4
2,547,034	-				+0.1
2,547,034	-				-1.4
2,547,078	+				+4.9
2,547,078	+				+4.5
2,547,078	+				+3.7
2,547,079	-				+1.2
2,547,079	-				-1.5
2,547,081	-				-2.2
2,547,114	+				+4.8
2,547,114	+				+6.3
2,547,114	+				+4.6
2,547,115	-				+3.5
2,547,115	-				-0.9
2,547,115	-				+1.3
2,547,199	+				+6.4
2,547,199	+				+3.0
2,547,200	-				-0.1
2,547,200	-				-2.4
2,547,200	-				-0.0
2,547,346	+		AO353_11525	0.14	+5.9
2,547,347	-		AO353_11525	0.14	-1.8
2,547,351	+		AO353_11525	0.15	+4.5
2,547,351	+		AO353_11525	0.15	+5.8
2,547,351	+		AO353_11525	0.15	+2.7
2,547,352	-		AO353_11525	0.15	-0.0
2,547,352	-		AO353_11525	0.15	-0.0
2,547,719	+		AO353_11525	0.46	+7.5
2,547,719	+		AO353_11525	0.46	+7.6
2,547,719	+		AO353_11525	0.46	+4.8
2,547,719	+		AO353_11525	0.46	+7.1
2,547,719	+		AO353_11525	0.46	+6.6
2,547,720	-		AO353_11525	0.46	-1.3
2,547,720	-		AO353_11525	0.46	-0.4
2,547,720	-		AO353_11525	0.46	+0.1
2,547,724	+		AO353_11525	0.46	+6.1
2,547,724	+		AO353_11525	0.46	+7.9
2,547,724	+		AO353_11525	0.46	+7.7
2,547,725	-		AO353_11525	0.46	-1.6
2,547,725	-		AO353_11525	0.46	-1.7
2,547,725	-		AO353_11525	0.46	+0.1
2,547,725	-		AO353_11525	0.46	-2.7
2,547,725	-		AO353_11525	0.46	-0.8
2,547,725	-		AO353_11525	0.46	-0.5
2,547,740	+		AO353_11525	0.47	+6.3
2,547,740	+		AO353_11525	0.47	+6.0
2,547,740	+		AO353_11525	0.47	+6.5
2,547,741	-		AO353_11525	0.48	+0.5
2,547,741	-		AO353_11525	0.48	-1.7
2,547,741	-		AO353_11525	0.48	+2.3
2,547,741	-		AO353_11525	0.48	-1.6
2,547,741	-		AO353_11525	0.48	+1.0
2,547,741	-		AO353_11525	0.48	+0.8
2,547,741	-		AO353_11525	0.48	-0.9
2,547,741	-		AO353_11525	0.48	+1.2