Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_08295

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
1,822,353	+		AO353_08290	0.47	+2.4
1,822,354	-		AO353_08290	0.47	-0.4
1,822,389	+		AO353_08290	0.50	+0.6
1,822,389	+		AO353_08290	0.50	+0.3
1,822,389	+		AO353_08290	0.50	-0.4
1,822,389	+		AO353_08290	0.50	-0.2
1,822,390	-		AO353_08290	0.50	-0.1
1,822,390	-		AO353_08290	0.50	+1.4
1,822,390	-		AO353_08290	0.50	-0.7
1,822,390	-		AO353_08290	0.50	+1.2
1,822,390	-		AO353_08290	0.50	-2.3
1,822,390	-		AO353_08290	0.50	+1.1
1,822,427	-		AO353_08290	0.52	+0.1
1,822,466	+		AO353_08290	0.55	+0.4
1,822,466	+		AO353_08290	0.55	-1.5
1,822,466	+		AO353_08290	0.55	+1.3
1,822,466	+		AO353_08290	0.55	+1.2
1,822,467	-		AO353_08290	0.55	+1.5
1,822,467	-		AO353_08290	0.55	-1.6
1,822,467	-		AO353_08290	0.55	+0.1
1,822,467	-		AO353_08290	0.55	+0.1
1,822,467	-		AO353_08290	0.55	+1.2
1,822,511	+		AO353_08290	0.58	+2.0
1,822,562	+		AO353_08290	0.62	-1.8
1,822,562	+		AO353_08290	0.62	-0.2
1,822,608	-		AO353_08290	0.65	-0.6
1,822,685	-		AO353_08290	0.70	+4.0
1,822,754	-		AO353_08290	0.75	-2.5
1,822,763	+		AO353_08290	0.76	-0.1
1,822,763	+		AO353_08290	0.76	-1.0
1,822,763	+		AO353_08290	0.76	-1.3
1,822,763	+		AO353_08290	0.76	-1.0
1,822,764	-		AO353_08290	0.76	-0.3
1,822,764	-		AO353_08290	0.76	+0.2
1,822,764	-		AO353_08290	0.76	-0.9
1,822,764	-		AO353_08290	0.76	-1.2
1,822,764	-		AO353_08290	0.76	+0.9
1,822,764	-		AO353_08290	0.76	-2.0
1,822,764	-		AO353_08290	0.76	-0.2
1,822,764	-		AO353_08290	0.76	+1.1
1,822,790	+		AO353_08290	0.78	+1.9
1,822,790	+		AO353_08290	0.78	-0.8
1,822,790	+		AO353_08290	0.78	+0.4
1,822,790	+		AO353_08290	0.78	+1.9
1,822,790	+		AO353_08290	0.78	+1.2
1,822,790	+		AO353_08290	0.78	-0.7
1,822,790	+		AO353_08290	0.78	+1.2
1,822,790	+		AO353_08290	0.78	-0.3
1,822,790	+		AO353_08290	0.78	-0.2
1,822,790	+		AO353_08290	0.78	-2.1
1,822,790	+		AO353_08290	0.78	-0.7
1,822,790	+		AO353_08290	0.78	+0.9
1,822,791	-		AO353_08290	0.78	+0.1
1,822,791	-		AO353_08290	0.78	+1.1
1,822,791	-		AO353_08290	0.78	-2.5
1,822,791	-		AO353_08290	0.78	-0.7
1,822,791	-		AO353_08290	0.78	-2.1
1,822,791	-		AO353_08290	0.78	-1.4
1,822,791	-		AO353_08290	0.78	-0.9
1,822,791	-		AO353_08290	0.78	+0.6
1,822,791	-		AO353_08290	0.78	+0.5
1,822,823	+		AO353_08290	0.80	+0.6
1,822,823	+		AO353_08290	0.80	+1.4
1,822,823	+		AO353_08290	0.80	+0.8
1,822,823	+		AO353_08290	0.80	-1.4
1,822,823	+		AO353_08290	0.80	+2.3
1,822,824	-		AO353_08290	0.80	-0.7
1,822,824	-		AO353_08290	0.80	-0.1
1,822,824	-		AO353_08290	0.80	-2.1
1,822,835	+		AO353_08290	0.81	-1.4
1,822,967	+				-0.9
1,823,051	+				-1.9
1,823,051	+				-1.5
1,823,051	+				-1.2
1,823,051	+				+2.2
1,823,052	-				-2.4
1,823,052	-				+0.6
1,823,112	+				-1.1
1,823,113	-				-1.8
1,823,120	-				-0.4
1,823,120	-				+0.3
1,823,120	-				-1.4
1,823,120	-				+1.5
1,823,120	-				+0.4
1,823,120	-				+1.8
1,823,120	-				+2.2
1,823,120	-				+1.1
1,823,120	-				+2.3
1,823,122	-				-0.7
1,823,122	-				+2.4
1,823,260	+				+2.6
1,823,283	+				-1.9
1,823,283	+				-0.5
1,823,283	+				-0.8
1,823,283	+				-1.8
1,823,284	-				-0.7
1,823,289	+				-1.2
1,823,289	+				-2.1
1,823,289	+				+0.8
1,823,289	+				-1.1
1,823,289	+				+1.2
1,823,289	+				+0.8
1,823,289	+				+1.6
1,823,289	+				+2.2
1,823,290	-				-1.4
1,823,290	-				+1.1
1,823,290	-				-1.7
1,823,290	-				-0.7
1,823,290	-				-0.7
1,823,290	-				-0.5
1,823,290	-				-1.0
1,823,626	+		AO353_08295	0.61	-2.2
1,823,626	+		AO353_08295	0.61	-0.9
1,823,626	+		AO353_08295	0.61	-1.0
1,823,627	-		AO353_08295	0.62	+0.1
1,823,627	-		AO353_08295	0.62	-0.1
1,823,627	-		AO353_08295	0.62	+0.8
1,823,627	-		AO353_08295	0.62	-2.2
1,823,780	+		AO353_08295	0.90	-0.4
1,823,780	+		AO353_08295	0.90	-0.9
1,823,780	+		AO353_08295	0.90	+2.2
1,823,780	+		AO353_08295	0.90	+0.1
1,823,780	+		AO353_08295	0.90	-1.4
1,823,780	+		AO353_08295	0.90	-0.7
1,823,780	+		AO353_08295	0.90	+3.1
1,823,781	-		AO353_08295	0.90	-1.9
1,823,781	-		AO353_08295	0.90	-0.3
1,823,781	-		AO353_08295	0.90	-0.3
1,823,781	-		AO353_08295	0.90	-2.8
1,823,834	+				-1.9
1,823,886	+				+0.7
1,823,886	+				+2.0
1,823,886	+				+1.3
1,823,886	+				-0.4
1,823,886	+				+0.7
1,823,886	+				+2.1
1,823,887	-				+2.2
1,823,887	-				-0.9
1,823,887	-				+1.2
1,823,887	-				+2.3
1,823,887	-				+1.6
1,823,887	-				-1.4
1,823,887	-				+0.3
1,823,887	-				+0.6
1,823,887	-				-1.2
1,823,887	-				-0.2
1,823,887	-				+2.6
1,823,952	+				-0.2
1,823,952	+				+1.7
1,823,953	-				-0.3
1,823,953	-				-0.3
1,823,953	-				+0.1
1,824,060	+				+2.5
1,824,132	+		AO353_08300	0.14	-2.0
1,824,132	+		AO353_08300	0.14	-0.1
1,824,133	-		AO353_08300	0.15	+2.2
1,824,133	-		AO353_08300	0.15	-2.4
1,824,564	+		AO353_08300	0.42	+1.5
1,824,564	+		AO353_08300	0.42	-0.7
1,824,565	-		AO353_08300	0.42	+0.7
1,824,663	-		AO353_08300	0.48	+0.2
1,824,663	-		AO353_08300	0.48	+0.9
1,824,687	+		AO353_08300	0.49	+0.2
1,824,687	+		AO353_08300	0.49	+0.6
1,824,687	+		AO353_08300	0.49	+1.0
1,824,688	-		AO353_08300	0.49	-3.0
1,824,688	-		AO353_08300	0.49	+0.5
1,824,688	-		AO353_08300	0.49	-3.1
1,824,688	-		AO353_08300	0.49	-0.8
1,824,688	-		AO353_08300	0.49	+1.2
1,824,688	-		AO353_08300	0.49	+1.1
1,824,688	-		AO353_08300	0.49	+0.1
1,824,688	-		AO353_08300	0.49	-0.6
1,824,688	-		AO353_08300	0.49	+0.1
1,824,691	+		AO353_08300	0.49	-0.5
1,824,691	+		AO353_08300	0.49	+1.1
1,824,691	+		AO353_08300	0.49	-0.7
1,824,691	+		AO353_08300	0.49	+0.7
1,824,691	+		AO353_08300	0.49	-0.6
1,824,691	+		AO353_08300	0.49	-2.8
1,824,691	+		AO353_08300	0.49	-1.0
1,824,692	-		AO353_08300	0.50	+4.0
1,824,692	-		AO353_08300	0.50	+2.4
1,824,692	-		AO353_08300	0.50	+1.0
1,824,692	-		AO353_08300	0.50	-1.2
1,824,692	-		AO353_08300	0.50	+1.5
1,824,692	-		AO353_08300	0.50	-1.1
1,824,692	-		AO353_08300	0.50	-1.2
1,824,692	-		AO353_08300	0.50	-1.3
1,824,692	-		AO353_08300	0.50	+2.4
1,824,834	+		AO353_08300	0.58	+2.0
1,824,835	-		AO353_08300	0.59	-0.2
1,824,835	-		AO353_08300	0.59	-0.7