Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_07680

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
1,691,121	+		AO353_07675	0.38	-2.1
1,691,121	+		AO353_07675	0.38	-1.5
1,691,121	+		AO353_07675	0.38	+0.6
1,691,121	+		AO353_07675	0.38	-0.8
1,691,121	+		AO353_07675	0.38	-2.1
1,691,121	+		AO353_07675	0.38	-3.0
1,691,121	+		AO353_07675	0.38	-1.3
1,691,122	-		AO353_07675	0.38	-1.1
1,691,122	-		AO353_07675	0.38	+0.8
1,691,122	-		AO353_07675	0.38	+1.0
1,691,122	-		AO353_07675	0.38	-0.1
1,691,188	+		AO353_07675	0.44	+1.0
1,691,188	+		AO353_07675	0.44	-0.6
1,691,188	+		AO353_07675	0.44	-0.9
1,691,189	-		AO353_07675	0.44	+0.7
1,691,189	-		AO353_07675	0.44	+1.7
1,691,189	-		AO353_07675	0.44	+2.8
1,691,189	-		AO353_07675	0.44	+0.2
1,691,189	-		AO353_07675	0.44	+0.3
1,691,189	-		AO353_07675	0.44	-0.4
1,691,200	-		AO353_07675	0.45	+0.2
1,691,267	-		AO353_07675	0.51	+0.6
1,691,267	-		AO353_07675	0.51	+2.6
1,691,304	+		AO353_07675	0.54	-2.0
1,691,304	+		AO353_07675	0.54	-0.8
1,691,304	+		AO353_07675	0.54	-0.6
1,691,304	+		AO353_07675	0.54	-0.7
1,691,304	+		AO353_07675	0.54	+2.8
1,691,304	+		AO353_07675	0.54	-0.8
1,691,305	-		AO353_07675	0.54	+1.0
1,691,305	-		AO353_07675	0.54	-1.9
1,691,305	-		AO353_07675	0.54	-2.3
1,691,305	-		AO353_07675	0.54	+2.8
1,691,305	-		AO353_07675	0.54	+1.1
1,691,305	-		AO353_07675	0.54	-1.8
1,691,305	-		AO353_07675	0.54	+0.6
1,691,305	-		AO353_07675	0.54	-0.6
1,691,305	-		AO353_07675	0.54	+2.2
1,691,305	-		AO353_07675	0.54	+0.9
1,691,338	+		AO353_07675	0.57	+2.0
1,691,339	-		AO353_07675	0.57	-1.1
1,691,370	+		AO353_07675	0.60	+0.2
1,691,370	+		AO353_07675	0.60	+2.4
1,691,370	+		AO353_07675	0.60	+0.6
1,691,371	-		AO353_07675	0.60	-0.4
1,691,371	-		AO353_07675	0.60	-1.0
1,691,371	-		AO353_07675	0.60	-1.6
1,691,424	+		AO353_07675	0.65	+0.3
1,691,424	+		AO353_07675	0.65	-1.0
1,691,424	+		AO353_07675	0.65	-1.7
1,691,424	+		AO353_07675	0.65	-1.1
1,691,424	+		AO353_07675	0.65	+0.6
1,691,458	+		AO353_07675	0.68	-0.1
1,691,544	-		AO353_07675	0.76	+2.4
1,691,571	+		AO353_07675	0.79	-2.0
1,691,571	+		AO353_07675	0.79	-0.3
1,691,601	+		AO353_07675	0.81	-2.1
1,691,601	+		AO353_07675	0.81	-0.3
1,691,601	+		AO353_07675	0.81	+0.3
1,691,601	+		AO353_07675	0.81	-2.1
1,691,602	-		AO353_07675	0.81	-0.2
1,691,602	-		AO353_07675	0.81	+0.4
1,691,797	+				-1.1
1,691,797	+				+0.7
1,691,797	+				-2.3
1,691,797	+				+0.8
1,691,798	-				-2.1
1,691,873	+				-1.8
1,691,873	+				-1.2
1,691,873	+				+0.4
1,691,873	+				+0.0
1,691,873	+				+0.7
1,691,873	+				-0.3
1,691,873	+				-0.6
1,691,873	+				+0.1
1,691,873	+				-0.5
1,691,873	+				-0.4
1,691,873	+				-0.4
1,691,873	+				-2.7
1,691,873	+				-1.9
1,691,873	+				+0.7
1,691,873	+				+1.4
1,691,874	-				-1.5
1,691,874	-				+0.4
1,691,874	-				-2.2
1,691,874	-				+2.3
1,691,874	-				-1.1
1,691,874	-				-1.3
1,691,874	-				+3.3
1,691,874	-				-1.3
1,691,874	-				-1.2
1,691,874	-				+2.4
1,691,874	-				+1.6
1,691,877	+				+1.3
1,691,877	+				-1.2
1,691,877	+				-1.6
1,691,877	+				-0.8
1,691,877	+				-1.7
1,691,877	+				-1.2
1,691,877	+				+0.9
1,691,878	-				+0.1
1,691,878	-				+1.1
1,691,878	-				+0.9
1,691,878	-				+1.8
1,691,878	-				+0.4
1,691,878	-				-1.1
1,691,878	-				-1.2
1,691,881	+				-1.1
1,691,881	+				-2.0
1,691,881	+				+2.9
1,691,881	+				-1.2
1,691,882	-				+2.7
1,691,882	-				-0.5
1,691,882	-				-1.5
1,691,882	-				-1.1
1,691,894	+				-0.4
1,691,894	+				-1.2
1,691,894	+				+0.2
1,691,894	+				-0.8
1,691,894	+				-0.9
1,691,894	+				-1.9
1,691,894	+				-1.5
1,691,894	+				-2.8
1,691,895	-				+0.3
1,691,895	-				-1.6
1,691,895	-				+0.2
1,691,895	-				-2.6
1,691,895	-				-0.8
1,691,895	-				-0.5
1,691,895	-				+0.7
1,691,898	+				+3.5
1,692,008	+				-0.7
1,692,008	+				-1.4
1,692,008	+				+1.0
1,692,009	-				-1.3
1,692,009	-				+2.1
1,692,009	-				+0.2
1,692,050	+				-0.8
1,692,051	-				-1.3
1,692,083	+				+1.7
1,692,083	+				-1.2
1,692,083	+				-1.0
1,692,083	+				-0.4
1,692,083	+				+0.4
1,692,083	+				-2.1
1,692,084	-				+1.4
1,692,084	-				-0.0
1,692,084	-				+1.3
1,692,104	-				+2.3
1,692,175	+				+1.3
1,692,175	+				-1.8
1,692,176	-				+2.4
1,692,176	-				-1.6
1,692,201	-				-0.6
1,692,201	-				-0.2
1,692,299	+		AO353_07680	0.16	-0.6
1,692,299	+		AO353_07680	0.16	+2.0
1,692,299	+		AO353_07680	0.16	-2.9
1,692,299	+		AO353_07680	0.16	-1.0
1,692,299	+		AO353_07680	0.16	-1.5
1,692,299	+		AO353_07680	0.16	-0.6
1,692,299	+		AO353_07680	0.16	+0.1
1,692,300	-		AO353_07680	0.16	+0.2
1,692,300	-		AO353_07680	0.16	-2.1
1,692,300	-		AO353_07680	0.16	-2.6
1,692,300	-		AO353_07680	0.16	+1.9
1,692,300	-		AO353_07680	0.16	+2.2
1,692,337	-		AO353_07680	0.19	-0.2
1,692,446	+		AO353_07680	0.28	+0.2
1,692,461	+		AO353_07680	0.29	-1.2
1,692,461	+		AO353_07680	0.29	+0.1
1,692,461	+		AO353_07680	0.29	+1.8
1,692,461	+		AO353_07680	0.29	-0.9
1,692,462	-		AO353_07680	0.29	+0.1
1,692,462	-		AO353_07680	0.29	+0.4
1,692,462	-		AO353_07680	0.29	-1.5
1,692,462	-		AO353_07680	0.29	-1.4
1,692,462	-		AO353_07680	0.29	+1.5
1,692,462	-		AO353_07680	0.29	+0.4
1,692,566	+		AO353_07680	0.37	-0.9
1,692,567	-		AO353_07680	0.37	-2.0
1,692,567	-		AO353_07680	0.37	-2.0
1,692,567	-		AO353_07680	0.37	-0.7
1,692,632	+		AO353_07680	0.42	-0.5
1,692,632	+		AO353_07680	0.42	-0.6
1,692,632	+		AO353_07680	0.42	+1.8
1,692,632	+		AO353_07680	0.42	+1.6
1,692,632	+		AO353_07680	0.42	-1.3
1,692,632	+		AO353_07680	0.42	+1.4
1,692,632	+		AO353_07680	0.42	+0.5
1,692,632	+		AO353_07680	0.42	-1.4
1,692,632	+		AO353_07680	0.42	+1.7
1,692,632	+		AO353_07680	0.42	+1.7
1,692,632	+		AO353_07680	0.42	-1.1
1,692,632	+		AO353_07680	0.42	-1.0
1,692,632	+		AO353_07680	0.42	+0.1
1,692,632	+		AO353_07680	0.42	+1.5
1,692,632	+		AO353_07680	0.42	-1.8
1,692,632	+		AO353_07680	0.42	-0.4
1,692,632	+		AO353_07680	0.42	+1.7
1,692,632	+		AO353_07680	0.42	+1.1
1,692,633	-		AO353_07680	0.42	-1.7
1,692,633	-		AO353_07680	0.42	+1.4
1,692,633	-		AO353_07680	0.42	+0.5
1,692,633	-		AO353_07680	0.42	-0.4
1,692,633	-		AO353_07680	0.42	-0.0
1,692,633	-		AO353_07680	0.42	-0.0
1,692,633	-		AO353_07680	0.42	+3.4
1,692,633	-		AO353_07680	0.42	-0.9
1,692,633	-		AO353_07680	0.42	-0.3
1,692,633	-		AO353_07680	0.42	+0.5
1,692,644	+		AO353_07680	0.43	+0.8
1,692,645	-		AO353_07680	0.43	+0.4
1,692,645	-		AO353_07680	0.43	-2.6
1,692,735	-		AO353_07680	0.50	+0.8
1,692,832	-		AO353_07680	0.57	-0.5
1,692,913	+		AO353_07680	0.64	+0.5
1,692,913	+		AO353_07680	0.64	-1.7
1,692,914	-		AO353_07680	0.64	+1.4
1,692,914	-		AO353_07680	0.64	+0.7
1,692,956	-				+1.2
1,693,154	+		AO353_07680	0.82	-0.7
1,693,154	+		AO353_07680	0.82	-0.4
1,693,155	-		AO353_07680	0.82	+0.1
1,693,155	-		AO353_07680	0.82	-1.8
1,693,155	-		AO353_07680	0.82	-2.4
1,693,251	-		AO353_07680	0.90	+1.5
1,693,277	+				-0.4
1,693,277	+				-2.0
1,693,277	+				+1.4
1,693,278	-				+0.1
1,693,278	-				-0.0
1,693,278	-				-0.7
1,693,278	-				-1.2
1,693,278	-				-2.3
1,693,278	-				-0.6
1,693,278	-				-0.7
1,693,310	+				-1.2
1,693,310	+				+1.6
1,693,355	+				+0.1
1,693,356	-				+0.5
1,693,356	-				-0.0
1,693,382	+				+0.3
1,693,383	-				+1.7
1,693,383	-				-1.2
1,693,495	+				-0.2
1,693,495	+				-3.0
1,693,495	+				-0.6
1,693,495	+				+1.6
1,693,496	-				+1.9
1,693,496	-				-1.0
1,693,496	-				+1.6
1,693,496	-				-0.9
1,693,505	+				+0.9
1,693,505	+				+1.2
1,693,505	+				-0.7
1,693,505	+				+0.8
1,693,505	+				-0.3
1,693,505	+				-0.8
1,693,505	+				-0.9
1,693,505	+				+0.8
1,693,505	+				+1.1
1,693,506	-				-1.1
1,693,506	-				-1.1
1,693,506	-				-0.7
1,693,506	-				-0.3
1,693,506	-				-1.6
1,693,506	-				+1.8
1,693,506	-				-1.6
1,693,506	-				-0.4
1,693,506	-				+1.7
1,693,506	-				-2.7
1,693,506	-				+1.1
1,693,506	-				-1.6
1,693,506	-				+0.1
1,693,506	-				-0.4
1,693,506	-				-0.7
1,693,522	+				-1.8
1,693,522	+				+0.8
1,693,522	+				+0.3
1,693,522	+				+0.6
1,693,522	+				-0.5
1,693,522	+				-1.6
1,693,523	-				-0.5
1,693,523	-				+0.6
1,693,540	-				+0.2
1,693,540	-				-2.3
1,693,548	-				-0.0
1,693,554	+				+1.1
1,693,562	-				+2.3
1,693,562	-				-0.7
1,693,576	+				+1.0
1,693,576	+				-0.1
1,693,576	+				+1.6
1,693,577	-				-0.8
1,693,577	-				+1.5
1,693,577	-				-0.7
1,693,578	+				+1.6
1,693,579	-				+1.9
1,693,592	+				+2.3
1,693,592	+				+0.7
1,693,592	+				-1.5
1,693,635	+				+0.5
1,693,635	+				-1.8
1,693,635	+				-0.3
1,693,686	-				+2.3
1,693,699	+				+1.1
1,693,700	-				-0.6
1,693,700	-				-1.0
1,693,733	-		AO353_07685	0.12	+2.7
1,693,846	+		AO353_07685	0.46	-0.8
1,693,846	+		AO353_07685	0.46	+1.6
1,693,846	+		AO353_07685	0.46	-0.3
1,693,847	-		AO353_07685	0.46	+1.2
1,693,876	+		AO353_07685	0.54	+0.9
1,693,908	-		AO353_07685	0.64	-0.9
1,693,967	+		AO353_07685	0.82	+0.3
1,693,968	-		AO353_07685	0.82	-1.2
1,693,968	-		AO353_07685	0.82	+1.5
1,693,968	-		AO353_07685	0.82	+1.1
1,693,988	+		AO353_07685	0.88	-0.6
1,694,031	+				-1.2
1,694,032	-				+1.0
1,694,032	-				+0.2
1,694,096	-				-0.8
1,694,131	-				-0.4
1,694,150	-				+0.8
1,694,180	+				-1.7
1,694,184	+				-2.0
1,694,184	+				+1.4
1,694,184	+				-1.4
1,694,184	+				-1.7
1,694,184	+				-0.8
1,694,184	+				-0.5
1,694,184	+				+1.2
1,694,185	-				+3.8
1,694,185	-				+2.7
1,694,203	+				-1.0
1,694,204	-				-0.1
1,694,204	-				-1.2
1,694,238	-				+0.3
1,694,246	+				+3.8
1,694,246	+				-0.4
1,694,247	-				+0.8
1,694,247	-				+1.0
1,694,247	-				-0.8
1,694,247	-				-1.5
1,694,247	-				-0.3
1,694,255	+				-1.1
1,694,255	+				-2.4
1,694,255	+				+1.9
1,694,255	+				+1.9
1,694,255	+				+1.2
1,694,255	+				-0.9
1,694,255	+				-3.0
1,694,256	-				-1.5
1,694,256	-				-1.2
1,694,256	-				+3.1
1,694,304	+		AO353_07690	0.12	-0.8
1,694,305	-		AO353_07690	0.12	+0.8
1,694,305	-		AO353_07690	0.12	-3.2
1,694,333	+		AO353_07690	0.17	-1.2
1,694,333	+		AO353_07690	0.17	-0.4
1,694,334	-		AO353_07690	0.17	+4.0
1,694,334	-		AO353_07690	0.17	-0.2
1,694,364	-		AO353_07690	0.23	+0.2