Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_07570

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
1,666,568	+				+0.4
1,666,568	+				+0.2
1,666,568	+				-0.0
1,666,568	+				-0.0
1,666,569	-				+0.9
1,666,659	-				+0.2
1,666,659	-				-0.3
1,666,803	+				-1.8
1,666,803	+				-1.3
1,666,803	+				-1.4
1,666,803	+				+0.8
1,666,803	+				+0.8
1,666,803	+				-1.2
1,666,803	+				+1.9
1,666,803	+				-1.3
1,666,803	+				+0.4
1,666,803	+				+2.4
1,666,803	+				+0.2
1,666,803	+				-1.0
1,666,803	+				+0.7
1,666,803	+				+0.8
1,666,803	+				-1.7
1,666,803	+				+0.8
1,666,803	+				-1.2
1,666,803	+				-0.0
1,666,803	+				+3.2
1,666,803	+				+2.8
1,666,803	+				+1.1
1,666,803	+				+0.4
1,666,803	+				+1.1
1,666,803	+				+1.0
1,666,803	+				-1.5
1,666,804	-				+1.6
1,666,804	-				+2.0
1,666,804	-				-0.5
1,666,804	-				-1.2
1,666,804	-				+1.2
1,666,804	-				+1.5
1,666,804	-				+0.7
1,666,804	-				-0.0
1,666,804	-				-1.5
1,666,804	-				-1.2
1,666,804	-				+0.7
1,666,804	-				-1.9
1,666,804	-				-0.3
1,666,804	-				+0.6
1,666,804	-				-1.2
1,666,804	-				-1.2
1,666,804	-				-1.3
1,666,804	-				-0.3
1,666,804	-				-0.9
1,666,804	-				-0.3
1,666,804	-				+0.8
1,666,804	-				-2.6
1,666,804	-				-1.5
1,666,804	-				+0.9
1,666,804	-				+0.7
1,666,804	-				+1.2
1,666,804	-				-2.1
1,666,804	-				+0.6
1,667,231	+				+1.2
1,667,232	-				+0.7
1,667,232	-				+1.0
1,667,232	-				+1.8
1,667,246	+				-0.2
1,667,246	+				+2.0
1,667,246	+				-1.2
1,667,246	+				+1.6
1,667,247	-				-0.9
1,667,247	-				+0.2
1,667,247	-				-2.4
1,667,247	-				-1.2
1,667,247	-				+1.1
1,667,247	-				+3.6
1,667,256	+				+1.7
1,667,256	+				-1.2
1,667,256	+				+1.0
1,667,256	+				-0.8
1,667,256	+				-1.8
1,667,256	+				-0.5
1,667,256	+				-0.4
1,667,256	+				+1.2
1,667,256	+				-1.8
1,667,257	-				-1.2
1,667,257	-				+0.3
1,667,257	-				-0.3
1,667,257	-				-3.0
1,667,257	-				-0.5
1,667,257	-				+0.3
1,667,257	-				-0.5
1,667,260	+				-1.0
1,667,260	+				-2.2
1,667,260	+				+1.1
1,667,260	+				+1.7
1,667,260	+				-0.6
1,667,260	+				-0.6
1,667,260	+				+1.9
1,667,260	+				-0.5
1,667,261	-				-1.4
1,667,261	-				-1.1
1,667,261	-				-0.2
1,667,261	-				+3.0
1,667,261	-				+0.8
1,667,261	-				+0.9
1,667,261	-				-0.2
1,667,261	-				-0.2
1,667,261	-				-0.4
1,667,261	-				-1.9
1,667,261	-				+0.6
1,667,261	-				-0.5
1,667,261	-				+3.2
1,667,261	-				+2.0
1,667,261	-				-0.6
1,667,261	-				-1.6
1,667,261	-				-2.1
1,667,310	+				-2.3
1,667,311	-				-0.6
1,667,311	-				-1.2
1,667,311	-				-1.1
1,667,311	-				+0.8
1,667,311	-				-1.0
1,667,331	-				-0.3
1,667,331	-				+2.6
1,667,367	+				-0.2
1,667,367	+				-0.6
1,667,367	+				-0.8
1,667,367	+				+1.2
1,667,367	+				+0.5
1,667,367	+				+2.9
1,667,367	+				+0.4
1,667,367	+				+1.3
1,667,368	-				+0.8
1,667,368	-				-2.9
1,667,370	+				-1.9
1,667,370	+				+2.2
1,667,370	+				-1.5
1,667,370	+				-0.6
1,667,370	+				+1.1
1,667,370	+				+0.6
1,667,371	-				-1.3
1,667,371	-				-2.7
1,667,371	-				-0.3
1,667,376	-				+1.3
1,667,376	-				+1.5
1,667,380	+				+1.7
1,667,380	+				+0.6
1,667,381	-				+0.6
1,667,381	-				+0.7
1,667,381	-				-1.9
1,667,381	-				-1.6
1,667,381	-				+1.3
1,667,381	-				-0.8
1,667,381	-				-0.4
1,667,381	-				-0.4
1,667,381	-				+0.8
1,667,413	+				+3.9
1,667,414	-				-2.0
1,667,414	-				+0.4
1,667,414	-				-0.9
1,667,414	-				+0.2
1,667,414	-				-1.8
1,667,419	+				-0.9
1,667,419	+				-1.5
1,667,419	+				+1.2
1,667,419	+				+0.6
1,667,419	+				+0.4
1,667,419	+				+1.9
1,667,419	+				-0.0
1,667,419	+				+2.5
1,667,419	+				+1.6
1,667,420	-				-1.2
1,667,420	-				-2.0
1,667,420	-				+0.8
1,667,420	-				+1.2
1,667,420	-				-2.2
1,667,420	-				+1.3
1,667,420	-				-0.5
1,667,420	-				-0.3
1,667,420	-				-1.2
1,667,420	-				-0.1
1,667,420	-				-0.5
1,667,420	-				+1.8
1,667,497	+				-0.2
1,667,504	+				+0.8
1,667,504	+				-0.6
1,667,505	-				+1.3
1,667,510	+				+2.5
1,667,510	+				-2.4
1,667,510	+				+0.5
1,667,511	-				+0.2
1,667,511	-				+2.0
1,667,628	+				-0.1
1,667,629	-				+2.4
1,667,629	-				-1.3
1,667,629	-				-0.6
1,667,629	-				+2.3
1,667,658	+				+0.6
1,667,658	+				+1.5
1,667,658	+				-0.0
1,667,712	+		AO353_07570	0.11	-1.1
1,667,712	+		AO353_07570	0.11	+1.8
1,667,712	+		AO353_07570	0.11	-0.8
1,667,712	+		AO353_07570	0.11	+0.4
1,667,713	-		AO353_07570	0.11	+1.8
1,667,713	-		AO353_07570	0.11	-0.2
1,667,713	-		AO353_07570	0.11	+0.2
1,667,713	-		AO353_07570	0.11	-2.8
1,667,713	-		AO353_07570	0.11	+1.2
1,667,713	-		AO353_07570	0.11	-0.5
1,667,777	+		AO353_07570	0.14	-1.1
1,667,777	+		AO353_07570	0.14	+3.1
1,667,777	+		AO353_07570	0.14	-1.4
1,667,777	+		AO353_07570	0.14	-1.0
1,667,778	-		AO353_07570	0.14	+1.4
1,667,879	-		AO353_07570	0.20	-0.0
1,668,074	+		AO353_07570	0.30	-1.3
1,668,074	+		AO353_07570	0.30	+1.6
1,668,074	+		AO353_07570	0.30	-0.7
1,668,075	-		AO353_07570	0.30	+0.8
1,668,075	-		AO353_07570	0.30	+0.2
1,668,364	+		AO353_07570	0.45	-2.3
1,668,364	+		AO353_07570	0.45	+1.4
1,668,364	+		AO353_07570	0.45	+1.2
1,668,364	+		AO353_07570	0.45	-0.9
1,668,364	+		AO353_07570	0.45	-0.4
1,668,365	-		AO353_07570	0.45	-0.7
1,668,785	+		AO353_07570	0.66	+1.5
1,668,785	+		AO353_07570	0.66	-3.1
1,668,785	+		AO353_07570	0.66	+0.2
1,668,785	+		AO353_07570	0.66	+4.1
1,668,785	+		AO353_07570	0.66	-0.4
1,668,785	+		AO353_07570	0.66	-1.9
1,668,786	-		AO353_07570	0.66	+0.6
1,668,786	-		AO353_07570	0.66	-0.6
1,668,803	+		AO353_07570	0.67	-1.3
1,668,803	+		AO353_07570	0.67	-1.3
1,668,804	-		AO353_07570	0.67	+0.1
1,668,804	-		AO353_07570	0.67	-0.9
1,668,804	-		AO353_07570	0.67	-1.9
1,668,912	+		AO353_07570	0.73	-0.1
1,668,912	+		AO353_07570	0.73	-0.6
1,668,913	-		AO353_07570	0.73	-0.7
1,668,913	-		AO353_07570	0.73	-0.6
1,668,913	-		AO353_07570	0.73	-2.2
1,669,072	+		AO353_07570	0.81	-0.0
1,669,073	-		AO353_07570	0.81	-1.2
1,669,073	-		AO353_07570	0.81	-2.5
1,669,184	+		AO353_07570	0.87	+0.2
1,669,185	-		AO353_07570	0.87	-0.9
1,669,248	+				-0.3
1,669,248	+				+1.4
1,669,248	+				+2.6
1,669,248	+				-1.3
1,669,249	-				-0.3
1,669,249	-				-1.2
1,669,260	+				+0.7
1,669,260	+				+0.0
1,669,260	+				+2.2
1,669,260	+				+0.1
1,669,260	+				+3.2
1,669,260	+				-1.7
1,669,261	-				-1.5
1,669,261	-				-0.2
1,669,261	-				-0.6
1,669,324	-				+0.0
1,669,435	+				-2.0
1,669,436	-				+1.0
1,669,436	-				-1.5
1,669,436	-				+0.6
1,669,436	-				+1.1
1,669,436	-				+2.6
1,669,436	-				-1.6
1,669,436	-				-1.6
1,669,677	+		AO353_07575	0.34	+2.2
1,669,677	+		AO353_07575	0.34	+0.8
1,669,677	+		AO353_07575	0.34	-1.0
1,669,678	-		AO353_07575	0.34	-0.5
1,669,678	-		AO353_07575	0.34	-2.0
1,669,705	+		AO353_07575	0.38	+0.6
1,669,705	+		AO353_07575	0.38	-1.5
1,669,713	+		AO353_07575	0.39	+1.8
1,669,713	+		AO353_07575	0.39	+1.0
1,669,713	+		AO353_07575	0.39	-1.2
1,669,713	+		AO353_07575	0.39	-0.7
1,669,714	-		AO353_07575	0.39	+1.0
1,669,714	-		AO353_07575	0.39	+0.2
1,669,714	-		AO353_07575	0.39	-0.6
1,669,714	-		AO353_07575	0.39	-0.5
1,669,714	-		AO353_07575	0.39	-1.0
1,669,714	-		AO353_07575	0.39	-2.0
1,669,999	+		AO353_07575	0.80	+1.4
1,670,034	+		AO353_07575	0.84	-2.0
1,670,034	+		AO353_07575	0.84	-0.7
1,670,034	+		AO353_07575	0.84	-0.8
1,670,034	+		AO353_07575	0.84	-1.4
1,670,035	-		AO353_07575	0.85	-1.4
1,670,035	-		AO353_07575	0.85	-0.4
1,670,035	-		AO353_07575	0.85	-0.9
1,670,035	-		AO353_07575	0.85	-0.3
1,670,035	-		AO353_07575	0.85	-0.9
1,670,035	-		AO353_07575	0.85	-1.2
1,670,035	-		AO353_07575	0.85	+0.4
1,670,141	+				+0.9
1,670,141	+				+1.0
1,670,142	-				-0.3
1,670,142	-				+0.8
1,670,142	-				-0.0
1,670,142	-				+0.7
1,670,142	-				-1.1
1,670,189	+				+1.2
1,670,189	+				-3.1
1,670,189	+				-0.0
1,670,189	+				+0.2
1,670,189	+				+1.3
1,670,190	-				+0.5
1,670,211	-				+1.5
1,670,253	+				+1.2
1,670,253	+				+1.0
1,670,254	-				-1.4
1,670,254	-				+1.4
1,670,280	+				+0.5
1,670,280	+				-0.0
1,670,280	+				-0.8
1,670,280	+				+2.6
1,670,280	+				-1.3
1,670,280	+				-2.2
1,670,281	-				+1.7
1,670,281	-				-0.0
1,670,281	-				-0.8
1,670,281	-				-2.0
1,670,281	-				+1.6
1,670,281	-				+0.2
1,670,281	-				-1.2
1,670,283	+				-0.4
1,670,283	+				+0.7
1,670,283	+				+2.0
1,670,283	+				+0.7
1,670,283	+				-0.6
1,670,283	+				+1.7
1,670,283	+				-0.5
1,670,284	-				-0.5
1,670,284	-				+0.9
1,670,284	-				+0.6
1,670,284	-				-1.2
1,670,284	-				-1.0
1,670,288	+				+0.9
1,670,288	+				-0.8
1,670,288	+				-0.7
1,670,288	+				-0.0
1,670,289	-				+1.6
1,670,289	-				+1.5
1,670,289	-				+1.0
1,670,314	+				+1.4
1,670,315	-				+0.2
1,670,315	-				-0.2
1,670,315	-				+2.7
1,670,315	-				-0.5
1,670,377	+				-1.0
1,670,377	+				-0.6
1,670,378	-				-0.4
1,670,378	-				-0.7
1,670,378	-				-0.7
1,670,378	-				+1.9
1,670,378	-				-1.2
1,670,378	-				-1.8
1,670,378	-				+0.2
1,670,378	-				-1.2