Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_07200

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
1,578,958	+				-0.0
1,578,958	+				+1.6
1,578,958	+				+1.4
1,578,958	+				-0.3
1,578,958	+				-0.9
1,578,958	+				-0.1
1,578,958	+				-1.4
1,578,958	+				+0.1
1,578,958	+				-1.2
1,578,958	+				-0.2
1,578,959	-				-0.9
1,578,959	-				+2.7
1,578,959	-				-0.8
1,578,959	-				-2.5
1,578,959	-				+0.1
1,578,959	-				+2.0
1,578,959	-				-0.6
1,578,959	-				-1.5
1,578,959	-				+1.0
1,578,959	-				-1.6
1,578,959	-				-1.0
1,578,959	-				+1.1
1,578,959	-				+0.2
1,578,959	-				+4.5
1,579,038	+				+1.1
1,579,038	+				+0.7
1,579,038	+				-0.9
1,579,038	+				-1.2
1,579,038	+				+0.3
1,579,038	+				-1.6
1,579,038	+				-1.6
1,579,038	+				-1.0
1,579,038	+				-0.6
1,579,038	+				+2.3
1,579,038	+				-1.7
1,579,038	+				-0.6
1,579,038	+				-0.0
1,579,038	+				-0.2
1,579,039	-				+1.6
1,579,039	-				+1.6
1,579,039	-				-0.3
1,579,039	-				+0.5
1,579,039	-				+1.9
1,579,039	-				-0.3
1,579,039	-				-0.3
1,579,042	+				+1.0
1,579,042	+				-0.9
1,579,042	+				-0.5
1,579,042	+				+2.1
1,579,042	+				+1.6
1,579,042	+				-0.4
1,579,042	+				-2.4
1,579,043	-				+0.0
1,579,043	-				+0.1
1,579,043	-				-2.0
1,579,043	-				+2.0
1,579,043	-				+1.7
1,579,043	-				+0.1
1,579,043	-				+0.7
1,579,043	-				+0.2
1,579,043	-				+1.9
1,579,043	-				+2.1
1,579,043	-				-0.2
1,579,043	-				-0.9
1,579,043	-				+0.1
1,579,043	-				+1.7
1,579,043	-				+0.8
1,579,043	-				-0.3
1,579,043	-				-0.8
1,579,043	-				+3.9
1,579,043	-				+1.3
1,579,043	-				+1.3
1,579,043	-				-1.3
1,579,099	+				-1.3
1,579,099	+				+0.1
1,579,099	+				+3.3
1,579,100	-				+0.9
1,579,100	-				+0.9
1,579,198	+				-0.4
1,579,198	+				-1.4
1,579,198	+				-1.4
1,579,199	-				-1.1
1,579,199	-				+2.0
1,579,241	+				-0.4
1,579,241	+				+1.8
1,579,241	+				+0.6
1,579,241	+				+0.0
1,579,241	+				+0.8
1,579,241	+				-1.5
1,579,241	+				+1.4
1,579,241	+				+0.8
1,579,241	+				+2.9
1,579,241	+				-0.0
1,579,242	-				-1.8
1,579,242	-				+0.0
1,579,242	-				+0.1
1,579,242	-				+0.2
1,579,242	-				-0.7
1,579,242	-				-2.2
1,579,242	-				+3.2
1,579,242	-				+0.3
1,579,242	-				-1.1
1,579,246	+				-1.2
1,579,246	+				-1.2
1,579,246	+				+0.8
1,579,246	+				-1.0
1,579,246	+				+4.7
1,579,247	-				+2.4
1,579,247	-				-2.4
1,579,247	-				+0.6
1,579,337	+		AO353_07195	0.18	+1.0
1,579,337	+		AO353_07195	0.18	+0.5
1,579,337	+		AO353_07195	0.18	-0.4
1,579,337	+		AO353_07195	0.18	+0.7
1,579,337	+		AO353_07195	0.18	+0.1
1,579,337	+		AO353_07195	0.18	-1.1
1,579,337	+		AO353_07195	0.18	-0.6
1,579,337	+		AO353_07195	0.18	-3.0
1,579,337	+		AO353_07195	0.18	-1.0
1,579,337	+		AO353_07195	0.18	+0.0
1,579,338	-		AO353_07195	0.18	-0.4
1,579,338	-		AO353_07195	0.18	-0.1
1,579,338	-		AO353_07195	0.18	+2.5
1,579,338	-		AO353_07195	0.18	-0.4
1,579,338	-		AO353_07195	0.18	+1.9
1,579,338	-		AO353_07195	0.18	+0.6
1,579,426	-		AO353_07195	0.39	+0.3
1,579,701	+				+0.6
1,579,702	-				+2.6
1,579,720	+				-0.1
1,579,721	-				+0.4
1,579,721	-				+0.8
1,579,721	-				+2.2
1,579,772	+				-2.5
1,579,772	+				-2.4
1,579,772	+				+0.9
1,579,773	-				+1.0
1,579,773	-				+2.9
1,579,773	-				-0.6
1,579,773	-				+0.3
1,579,773	-				+0.0
1,579,773	-				+2.7
1,579,773	-				+0.6
1,579,773	-				+2.0
1,579,773	-				+3.4
1,579,777	+				+1.1
1,579,778	-				-0.9
1,579,778	-				+2.0
1,579,778	-				-0.4
1,579,778	-				-0.3
1,579,778	-				-1.2
1,579,783	+				-2.2
1,579,784	-				+1.9
1,579,784	-				+2.7
1,579,784	-				-0.4
1,579,795	+				+0.4
1,579,815	+				+0.3
1,579,815	+				-0.9
1,579,816	-				+0.9
1,579,841	+				-0.3
1,579,841	+				-2.4
1,579,841	+				-0.0
1,579,842	-				+0.8
1,579,842	-				+0.8
1,579,842	-				+2.7
1,579,842	-				+4.1
1,579,877	-				+2.8
1,579,912	+				-0.1
1,579,912	+				+0.4
1,579,913	-				+1.0
1,579,927	+				+0.1
1,579,927	+				-0.9
1,579,927	+				+1.2
1,579,927	+				-2.4
1,579,927	+				+2.3
1,579,927	+				+0.4
1,579,927	+				+2.8
1,579,927	+				+4.6
1,579,927	+				+1.6
1,579,927	+				-1.7
1,579,928	-				-1.9
1,579,928	-				-0.9
1,579,928	-				+2.1
1,579,928	-				+2.7
1,579,928	-				+0.1
1,579,930	+				-1.7
1,579,965	+				+0.5
1,579,965	+				+0.3
1,579,966	-				+2.8
1,579,966	-				+3.1
1,579,966	-				-1.1
1,579,966	-				+2.3
1,579,966	-				+1.0
1,580,008	+		AO353_07200	0.14	+2.1
1,580,008	+		AO353_07200	0.14	+1.7
1,580,008	+		AO353_07200	0.14	-1.5
1,580,009	-		AO353_07200	0.14	+3.3
1,580,009	-		AO353_07200	0.14	+2.5
1,580,009	-		AO353_07200	0.14	+0.1
1,580,228	+		AO353_07200	0.48	+1.5
1,580,228	+		AO353_07200	0.48	-1.7
1,580,228	+		AO353_07200	0.48	+0.5
1,580,228	+		AO353_07200	0.48	+3.0
1,580,228	+		AO353_07200	0.48	+1.2
1,580,228	+		AO353_07200	0.48	+2.3
1,580,229	-		AO353_07200	0.48	-1.4
1,580,229	-		AO353_07200	0.48	+2.8
1,580,273	+		AO353_07200	0.55	+1.3
1,580,273	+		AO353_07200	0.55	+0.9
1,580,273	+		AO353_07200	0.55	+2.5
1,580,273	+		AO353_07200	0.55	+1.1
1,580,273	+		AO353_07200	0.55	+1.0
1,580,273	+		AO353_07200	0.55	+0.2
1,580,273	+		AO353_07200	0.55	+2.2
1,580,273	+		AO353_07200	0.55	+2.1
1,580,273	+		AO353_07200	0.55	+2.7
1,580,273	+		AO353_07200	0.55	+1.3
1,580,273	+		AO353_07200	0.55	+1.7
1,580,274	-		AO353_07200	0.55	+1.8
1,580,274	-		AO353_07200	0.55	+3.1
1,580,274	-		AO353_07200	0.55	-0.0
1,580,274	-		AO353_07200	0.55	+1.0
1,580,274	-		AO353_07200	0.55	+0.2
1,580,274	-		AO353_07200	0.55	-1.0
1,580,274	-		AO353_07200	0.55	+2.4
1,580,274	-		AO353_07200	0.55	+1.6
1,580,311	+		AO353_07200	0.61	-2.1
1,580,312	-		AO353_07200	0.61	-1.0
1,580,312	-		AO353_07200	0.61	+1.8
1,580,312	-		AO353_07200	0.61	+2.6
1,580,594	+				+0.5
1,580,594	+				-1.2
1,580,595	-				-0.4
1,580,595	-				+1.1
1,580,990	+		AO353_07205	0.61	-1.1
1,580,990	+		AO353_07205	0.61	-1.1
1,580,990	+		AO353_07205	0.61	+2.6
1,580,990	+		AO353_07205	0.61	-0.6
1,580,990	+		AO353_07205	0.61	-1.9
1,580,990	+		AO353_07205	0.61	-1.4
1,580,990	+		AO353_07205	0.61	-1.8
1,580,990	+		AO353_07205	0.61	+2.9
1,580,990	+		AO353_07205	0.61	-1.2
1,580,990	+		AO353_07205	0.61	+6.0
1,580,991	-		AO353_07205	0.61	+0.7
1,580,991	-		AO353_07205	0.61	+1.6
1,580,991	-		AO353_07205	0.61	+2.1
1,580,991	-		AO353_07205	0.61	-0.7
1,580,991	-		AO353_07205	0.61	+1.8
1,580,991	-		AO353_07205	0.61	+1.6
1,580,991	-		AO353_07205	0.61	+1.8
1,580,991	-		AO353_07205	0.61	-0.9
1,580,991	-		AO353_07205	0.61	-1.0
1,580,991	-		AO353_07205	0.61	-0.3
1,580,991	-		AO353_07205	0.61	+2.7
1,580,991	-		AO353_07205	0.61	+0.7
1,580,991	-		AO353_07205	0.61	+1.8
1,581,004	-		AO353_07205	0.63	-0.6
1,581,249	+				+0.5
1,581,249	+				-0.4
1,581,249	+				+0.7
1,581,249	+				-1.0
1,581,250	-				-0.0
1,581,250	-				+0.9
1,581,250	-				+0.7
1,581,250	-				+0.3
1,581,288	-				+1.3
1,581,340	+				-0.4
1,581,340	+				-0.2
1,581,340	+				-1.4
1,581,340	+				+0.8
1,581,341	-				+3.1
1,581,341	-				+0.9
1,581,341	-				-2.3
1,581,341	-				+0.1
1,581,441	+		AO353_07210	0.13	-0.4
1,581,441	+		AO353_07210	0.13	+0.8
1,581,441	+		AO353_07210	0.13	+0.4
1,581,441	+		AO353_07210	0.13	-0.6
1,581,441	+		AO353_07210	0.13	+0.1
1,581,442	-		AO353_07210	0.14	-0.0
1,581,442	-		AO353_07210	0.14	-0.7
1,581,500	-		AO353_07210	0.20	-0.6