Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS18425

Experiment: D-Glucose-6-Phosphate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS18420 and BWI76_RS18425 are separated by 17 nucleotidesBWI76_RS18425 and BWI76_RS18430 are separated by 42 nucleotidesBWI76_RS18430 and BWI76_RS18435 are separated by 624 nucleotides BWI76_RS18420: BWI76_RS18420 - DNA (cytosine-5-)-methyltransferase, at 3,821,766 to 3,823,238 _RS18420 BWI76_RS18425: BWI76_RS18425 - phosphohydrolase, at 3,823,256 to 3,823,951 _RS18425 BWI76_RS18430: BWI76_RS18430 - hypothetical protein, at 3,823,994 to 3,824,275 _RS18430 BWI76_RS18435: BWI76_RS18435 - porin, at 3,824,900 to 3,825,970 _RS18435 Position (kb) 3823 3824Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 3822.273 kb on + strand, within BWI76_RS18420at 3822.299 kb on + strand, within BWI76_RS18420at 3822.317 kb on + strand, within BWI76_RS18420at 3822.344 kb on + strand, within BWI76_RS18420at 3822.431 kb on + strand, within BWI76_RS18420at 3822.439 kb on - strand, within BWI76_RS18420at 3822.713 kb on - strand, within BWI76_RS18420at 3822.788 kb on - strand, within BWI76_RS18420at 3823.001 kb on + strand, within BWI76_RS18420at 3823.266 kb on + strandat 3823.267 kb on + strandat 3823.274 kb on - strandat 3823.323 kb on + strandat 3823.335 kb on + strand, within BWI76_RS18425at 3823.343 kb on - strand, within BWI76_RS18425at 3823.835 kb on + strand, within BWI76_RS18425at 3823.972 kb on - strandat 3823.979 kb on - strandat 3823.994 kb on - strandat 3824.162 kb on - strand, within BWI76_RS18430at 3824.173 kb on + strand, within BWI76_RS18430at 3824.181 kb on - strand, within BWI76_RS18430at 3824.196 kb on - strand, within BWI76_RS18430at 3824.285 kb on - strandat 3824.316 kb on - strandat 3824.410 kb on - strandat 3824.511 kb on + strandat 3824.511 kb on + strandat 3824.511 kb on + strandat 3824.515 kb on + strandat 3824.515 kb on + strandat 3824.519 kb on - strandat 3824.523 kb on - strandat 3824.523 kb on - strandat 3824.523 kb on - strandat 3824.523 kb on - strandat 3824.534 kb on - strandat 3824.535 kb on + strandat 3824.537 kb on + strandat 3824.537 kb on + strandat 3824.543 kb on + strandat 3824.543 kb on + strandat 3824.543 kb on + strandat 3824.543 kb on + strandat 3824.544 kb on - strandat 3824.551 kb on - strandat 3824.551 kb on - strandat 3824.551 kb on - strandat 3824.551 kb on - strandat 3824.567 kb on + strandat 3824.587 kb on - strandat 3824.687 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose-6-Phosphate (C)
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3,822,273 + BWI76_RS18420 0.34 -0.7
3,822,299 + BWI76_RS18420 0.36 +2.1
3,822,317 + BWI76_RS18420 0.37 +0.0
3,822,344 + BWI76_RS18420 0.39 -0.1
3,822,431 + BWI76_RS18420 0.45 -0.2
3,822,439 - BWI76_RS18420 0.46 -0.8
3,822,713 - BWI76_RS18420 0.64 +0.4
3,822,788 - BWI76_RS18420 0.69 +1.1
3,823,001 + BWI76_RS18420 0.84 -0.1
3,823,266 + -3.1
3,823,267 + +0.4
3,823,274 - +0.1
3,823,323 + +0.5
3,823,335 + BWI76_RS18425 0.11 -0.1
3,823,343 - BWI76_RS18425 0.12 -2.1
3,823,835 + BWI76_RS18425 0.83 -1.7
3,823,972 - +0.0
3,823,979 - -0.1
3,823,994 - -0.4
3,824,162 - BWI76_RS18430 0.60 +0.6
3,824,173 + BWI76_RS18430 0.63 -0.4
3,824,181 - BWI76_RS18430 0.66 -0.4
3,824,196 - BWI76_RS18430 0.72 -0.3
3,824,285 - +0.6
3,824,316 - +0.0
3,824,410 - -0.4
3,824,511 + -0.8
3,824,511 + +1.2
3,824,511 + +0.4
3,824,515 + -0.2
3,824,515 + +1.1
3,824,519 - -0.2
3,824,523 - +0.0
3,824,523 - +1.0
3,824,523 - +3.1
3,824,523 - +0.3
3,824,534 - +0.6
3,824,535 + +1.0
3,824,537 + -0.8
3,824,537 + +0.9
3,824,543 + +0.5
3,824,543 + -1.2
3,824,543 + -0.5
3,824,543 + +0.2
3,824,544 - +0.7
3,824,551 - +0.8
3,824,551 - +0.0
3,824,551 - -0.0
3,824,551 - -1.7
3,824,567 + -2.2
3,824,587 - -0.2
3,824,687 - -0.3

Or see this region's nucleotide sequence