Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_29185

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
6,338,928	-				-0.2
6,338,944	+		AO353_29180	0.12	+2.0
6,338,944	+		AO353_29180	0.12	-0.0
6,338,944	+		AO353_29180	0.12	+1.0
6,338,945	-		AO353_29180	0.12	+0.6
6,338,945	-		AO353_29180	0.12	-0.2
6,339,026	+		AO353_29180	0.21	-1.2
6,339,026	+		AO353_29180	0.21	+2.2
6,339,026	+		AO353_29180	0.21	-2.1
6,339,026	+		AO353_29180	0.21	-2.0
6,339,026	+		AO353_29180	0.21	-1.2
6,339,027	-		AO353_29180	0.21	+0.5
6,339,027	-		AO353_29180	0.21	-1.0
6,339,225	+		AO353_29180	0.43	+0.6
6,339,393	+		AO353_29180	0.61	+1.4
6,339,394	-		AO353_29180	0.61	-2.0
6,339,394	-		AO353_29180	0.61	-2.7
6,339,394	-		AO353_29180	0.61	-2.4
6,339,394	-		AO353_29180	0.61	-2.4
6,339,614	+		AO353_29180	0.85	-0.5
6,339,713	+				-2.8
6,339,713	+				-0.4
6,339,734	+				-0.5
6,339,734	+				-2.2
6,339,734	+				-2.0
6,339,758	-				+0.9
6,339,805	+				+2.1
6,339,805	+				-1.7
6,339,805	+				+1.7
6,339,805	+				+0.5
6,339,806	-				+1.3
6,339,806	-				+0.8
6,339,806	-				+0.4
6,339,806	-				-1.6
6,339,806	-				-0.2
6,339,807	+				+1.2
6,339,807	+				+2.3
6,339,807	+				+0.1
6,339,807	+				+0.2
6,339,807	+				-1.6
6,339,807	+				-0.5
6,339,807	+				-1.1
6,339,807	+				-2.7
6,339,807	+				+2.4
6,339,808	-				+0.2
6,339,808	-				+0.5
6,339,808	-				-1.9
6,339,808	-				-1.4
6,339,808	-				-0.4
6,339,808	-				-0.6
6,339,808	-				+1.2
6,339,809	+				+0.8
6,339,809	+				-1.9
6,339,809	+				-1.8
6,339,809	+				-1.0
6,339,810	-				-0.0
6,339,810	-				-1.9
6,339,810	-				-2.3
6,339,810	-				-0.7
6,339,810	-				+1.1
6,339,810	-				-0.6
6,339,810	-				+0.9
6,339,810	-				-1.7
6,339,810	-				-2.6
6,339,810	-				-2.8
6,339,872	+				-0.2
6,339,872	+				+1.3
6,339,872	+				+0.6
6,339,872	+				+2.1
6,339,872	+				+0.9
6,339,873	-				-1.1
6,339,873	-				+1.0
6,339,897	+				-1.1
6,339,897	+				+1.2
6,339,897	+				+1.5
6,339,897	+				+1.0
6,339,898	-				+1.3
6,339,898	-				+0.8
6,339,916	-				-1.5
6,340,022	+		AO353_29185	0.19	-0.6
6,340,022	+		AO353_29185	0.19	+0.1
6,340,023	-		AO353_29185	0.19	+0.7
6,340,023	-		AO353_29185	0.19	-1.6
6,340,023	-		AO353_29185	0.19	+1.0
6,340,099	+		AO353_29185	0.32	+1.0
6,340,099	+		AO353_29185	0.32	-2.8
6,340,100	-		AO353_29185	0.33	-0.9
6,340,141	-		AO353_29185	0.40	-0.0
6,340,208	+		AO353_29185	0.51	-1.1
6,340,209	-		AO353_29185	0.51	-2.1
6,340,346	+		AO353_29185	0.75	-2.7
6,340,346	+		AO353_29185	0.75	-0.3
6,340,346	+		AO353_29185	0.75	-2.1
6,340,346	+		AO353_29185	0.75	+1.4
6,340,347	-		AO353_29185	0.75	-0.0
6,340,480	-				+1.3
6,340,480	-				+1.5
6,340,480	-				+1.9
6,340,480	-				+1.4
6,340,510	-				-0.9
6,340,510	-				-2.4
6,340,519	-				+0.7
6,340,603	+				-0.8
6,340,645	+				-2.7
6,340,646	-				+0.5
6,340,702	+				-1.1
6,340,708	+				-1.6
6,340,712	+				+1.1
6,340,712	+				-1.2
6,340,712	+				+2.9
6,340,712	+				+0.6
6,340,712	+				+0.0
6,340,712	+				+0.1
6,340,712	+				+2.4
6,340,713	-				+0.3
6,340,713	-				-1.6
6,340,713	-				+0.1
6,340,713	-				-2.5
6,340,713	-				-2.7
6,340,713	-				+1.5
6,340,713	-				+0.1
6,340,713	-				-0.2
6,340,713	-				-1.2
6,340,733	+				-1.1
6,340,733	+				+2.3
6,340,733	+				+1.6
6,340,733	+				+0.1
6,340,733	+				+2.6
6,340,733	+				-2.1
6,340,733	+				-1.4
6,340,733	+				-0.5
6,340,733	+				+2.1
6,340,734	-				-0.7
6,340,734	-				-3.2
6,340,734	-				+1.1
6,340,734	-				+1.2
6,340,734	-				-1.6
6,340,734	-				-2.0
6,340,734	-				-0.5
6,340,734	-				-0.7
6,340,734	-				+0.5
6,340,734	-				-0.3
6,340,788	-		AO353_29190	0.13	+0.2
6,340,803	+		AO353_29190	0.15	-1.7
6,340,803	+		AO353_29190	0.15	+1.3
6,340,803	+		AO353_29190	0.15	+0.1
6,340,804	-		AO353_29190	0.15	-1.1
6,340,804	-		AO353_29190	0.15	-0.9
6,340,804	-		AO353_29190	0.15	-0.9
6,340,906	+		AO353_29190	0.23	-0.2
6,340,906	+		AO353_29190	0.23	-1.4
6,340,907	-		AO353_29190	0.23	-1.0
6,340,907	-		AO353_29190	0.23	-1.0
6,340,907	-		AO353_29190	0.23	-1.2
6,340,909	+		AO353_29190	0.23	-3.1
6,340,909	+		AO353_29190	0.23	-1.8
6,340,909	+		AO353_29190	0.23	-2.1
6,340,909	+		AO353_29190	0.23	-1.1
6,340,909	+		AO353_29190	0.23	+1.6
6,340,909	+		AO353_29190	0.23	-0.2
6,340,909	+		AO353_29190	0.23	+1.7
6,340,909	+		AO353_29190	0.23	-1.6
6,340,909	+		AO353_29190	0.23	-0.7
6,340,910	-		AO353_29190	0.23	+0.1
6,340,910	-		AO353_29190	0.23	+0.8
6,340,910	-		AO353_29190	0.23	-1.2
6,340,920	+		AO353_29190	0.24	+1.4
6,340,920	+		AO353_29190	0.24	+0.1
6,340,920	+		AO353_29190	0.24	-3.0
6,340,920	+		AO353_29190	0.24	+0.5
6,340,920	+		AO353_29190	0.24	+2.5
6,340,920	+		AO353_29190	0.24	-1.4
6,340,921	-		AO353_29190	0.24	-1.4
6,340,921	-		AO353_29190	0.24	-1.8
6,340,921	-		AO353_29190	0.24	-0.6
6,340,928	+		AO353_29190	0.25	+1.5
6,340,928	+		AO353_29190	0.25	+0.2
6,340,928	+		AO353_29190	0.25	-0.2
6,340,928	+		AO353_29190	0.25	-1.7
6,340,928	+		AO353_29190	0.25	-0.4
6,340,928	+		AO353_29190	0.25	-2.1
6,340,928	+		AO353_29190	0.25	+0.8
6,340,928	+		AO353_29190	0.25	-0.2
6,340,928	+		AO353_29190	0.25	-1.7
6,340,929	-		AO353_29190	0.25	-0.7
6,340,929	-		AO353_29190	0.25	+2.1
6,341,019	+		AO353_29190	0.33	-1.4
6,341,019	+		AO353_29190	0.33	-2.0
6,341,019	+		AO353_29190	0.33	+1.0
6,341,019	+		AO353_29190	0.33	-2.1
6,341,019	+		AO353_29190	0.33	+0.3
6,341,019	+		AO353_29190	0.33	-1.4
6,341,020	-		AO353_29190	0.33	+0.5
6,341,020	-		AO353_29190	0.33	-0.5
6,341,020	-		AO353_29190	0.33	-0.4
6,341,020	-		AO353_29190	0.33	-1.2
6,341,020	-		AO353_29190	0.33	+2.8
6,341,020	-		AO353_29190	0.33	+0.7
6,341,049	+		AO353_29190	0.35	+0.4
6,341,050	-		AO353_29190	0.35	-1.0
6,341,069	-		AO353_29190	0.37	+0.4
6,341,078	+		AO353_29190	0.37	+0.1
6,341,078	+		AO353_29190	0.37	+1.2
6,341,079	-		AO353_29190	0.37	-0.5
6,341,079	-		AO353_29190	0.37	-0.2
6,341,079	-		AO353_29190	0.37	-1.1
6,341,079	-		AO353_29190	0.37	+2.0
6,341,233	+		AO353_29190	0.50	-1.6
6,341,233	+		AO353_29190	0.50	+1.6
6,341,233	+		AO353_29190	0.50	+0.7
6,341,233	+		AO353_29190	0.50	-1.8
6,341,233	+		AO353_29190	0.50	-2.0
6,341,233	+		AO353_29190	0.50	+0.2
6,341,233	+		AO353_29190	0.50	-1.4
6,341,234	-		AO353_29190	0.50	-0.1
6,341,234	-		AO353_29190	0.50	+1.5
6,341,234	-		AO353_29190	0.50	+1.3
6,341,234	-		AO353_29190	0.50	+0.8
6,341,234	-		AO353_29190	0.50	+1.4
6,341,234	-		AO353_29190	0.50	+1.4
6,341,234	-		AO353_29190	0.50	-1.5
6,341,282	-		AO353_29190	0.54	+0.5
6,341,394	+		AO353_29190	0.64	+0.0
6,341,395	-		AO353_29190	0.64	-1.4