Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_28850

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
6,275,850	+		AO353_28840	0.66	-2.4
6,275,851	-		AO353_28840	0.66	-1.1
6,275,965	-		AO353_28840	0.77	-1.6
6,275,965	-		AO353_28840	0.77	+0.5
6,275,965	-		AO353_28840	0.77	+0.6
6,275,983	-		AO353_28840	0.78	-0.8
6,276,048	+		AO353_28840	0.84	+0.6
6,276,099	+		AO353_28840	0.89	-0.5
6,276,099	+		AO353_28840	0.89	+2.3
6,276,100	-		AO353_28840	0.89	-0.1
6,276,100	-		AO353_28840	0.89	+0.8
6,276,100	-		AO353_28840	0.89	+1.5
6,276,100	-		AO353_28840	0.89	+1.3
6,276,155	-				+1.1
6,276,155	-				-0.4
6,276,155	-				-0.6
6,276,251	+				-0.9
6,276,252	-				-1.6
6,276,252	-				-1.7
6,276,256	+				+0.5
6,276,257	-				-1.1
6,276,270	+				+0.4
6,276,270	+				-0.4
6,276,270	+				-0.7
6,276,271	-				+0.1
6,276,271	-				+0.7
6,276,271	-				-2.4
6,276,271	-				-0.9
6,276,271	-				+0.9
6,276,272	+				+0.1
6,276,273	-				-0.2
6,276,273	-				-1.5
6,276,334	+		AO353_28845	0.11	-0.3
6,276,334	+		AO353_28845	0.11	-1.6
6,276,344	+		AO353_28845	0.14	-0.5
6,276,344	+		AO353_28845	0.14	+0.7
6,276,345	-		AO353_28845	0.14	-0.5
6,276,347	+		AO353_28845	0.15	+1.3
6,276,347	+		AO353_28845	0.15	-1.4
6,276,348	-		AO353_28845	0.15	-2.1
6,276,348	-		AO353_28845	0.15	-0.7
6,276,348	-		AO353_28845	0.15	+1.8
6,276,348	-		AO353_28845	0.15	-0.8
6,276,348	-		AO353_28845	0.15	-1.2
6,276,385	+		AO353_28845	0.24	+1.4
6,276,385	+		AO353_28845	0.24	+1.3
6,276,385	+		AO353_28845	0.24	+0.2
6,276,386	-		AO353_28845	0.25	+0.1
6,276,386	-		AO353_28845	0.25	-0.6
6,276,386	-		AO353_28845	0.25	+0.8
6,276,386	-		AO353_28845	0.25	+2.3
6,276,386	-		AO353_28845	0.25	-1.1
6,276,386	-		AO353_28845	0.25	+0.2
6,276,392	+		AO353_28845	0.26	-0.4
6,276,392	+		AO353_28845	0.26	-0.5
6,276,392	+		AO353_28845	0.26	-0.8
6,276,392	+		AO353_28845	0.26	-0.9
6,276,392	+		AO353_28845	0.26	-0.5
6,276,393	-		AO353_28845	0.26	+0.1
6,276,393	-		AO353_28845	0.26	+1.6
6,276,393	-		AO353_28845	0.26	-1.5
6,276,393	-		AO353_28845	0.26	-0.6
6,276,402	-		AO353_28845	0.29	+1.7
6,276,434	-		AO353_28845	0.37	+1.2
6,276,475	-		AO353_28845	0.47	-1.6
6,276,529	+		AO353_28845	0.61	-0.2
6,276,534	+		AO353_28845	0.63	-2.8
6,276,534	+		AO353_28845	0.63	+0.5
6,276,535	-		AO353_28845	0.63	+0.1
6,276,535	-		AO353_28845	0.63	-1.2
6,276,597	-		AO353_28845	0.79	-1.4
6,276,777	+				+0.9
6,276,777	+				+0.3
6,276,777	+				+1.7
6,276,777	+				-1.6
6,276,822	+				-0.5
6,276,822	+				-0.7
6,276,822	+				-0.9
6,276,822	+				-0.0
6,276,822	+				-0.4
6,276,822	+				+1.1
6,276,822	+				-0.7
6,276,822	+				+1.1
6,276,822	+				+1.5
6,276,822	+				+1.2
6,276,822	+				-0.5
6,276,823	-				+0.4
6,276,823	-				+2.0
6,276,823	-				+1.1
6,276,823	-				+0.3
6,276,823	-				-0.5
6,276,823	-				-1.5
6,276,823	-				+0.6
6,276,823	-				+0.1
6,276,823	-				+0.5
6,276,825	+				+0.3
6,276,841	+				+1.0
6,276,842	-				+2.8
6,276,902	+				+2.1
6,276,902	+				-1.0
6,276,902	+				-3.1
6,276,903	-				-0.2
6,276,938	+		AO353_28850	0.12	+0.4
6,276,938	+		AO353_28850	0.12	-0.9
6,276,938	+		AO353_28850	0.12	+1.6
6,276,938	+		AO353_28850	0.12	+0.6
6,276,939	-		AO353_28850	0.12	-0.1
6,276,939	-		AO353_28850	0.12	-0.8
6,276,980	+		AO353_28850	0.17	+2.6
6,276,980	+		AO353_28850	0.17	-0.4
6,276,980	+		AO353_28850	0.17	-1.7
6,276,981	-		AO353_28850	0.17	+0.9
6,276,981	-		AO353_28850	0.17	-0.9
6,276,981	-		AO353_28850	0.17	-1.4
6,277,248	+		AO353_28850	0.45	-1.7
6,277,249	-		AO353_28850	0.45	+1.8
6,277,268	+		AO353_28850	0.47	+1.9
6,277,414	+		AO353_28850	0.63	-2.3
6,277,414	+		AO353_28850	0.63	-0.5
6,277,414	+		AO353_28850	0.63	-1.7
6,277,414	+		AO353_28850	0.63	-2.1
6,277,414	+		AO353_28850	0.63	-1.5
6,277,414	+		AO353_28850	0.63	-1.2
6,277,415	-		AO353_28850	0.63	+3.3
6,277,415	-		AO353_28850	0.63	+1.4
6,277,415	-		AO353_28850	0.63	-0.7
6,277,415	-		AO353_28850	0.63	+0.1
6,277,415	-		AO353_28850	0.63	+1.1
6,277,415	-		AO353_28850	0.63	-2.4
6,277,439	+		AO353_28850	0.65	-0.2
6,277,478	+		AO353_28850	0.69	-1.4
6,277,478	+		AO353_28850	0.69	-0.2
6,277,478	+		AO353_28850	0.69	-0.5
6,277,479	-		AO353_28850	0.70	-2.0
6,277,535	-		AO353_28850	0.75	-0.1
6,277,567	-		AO353_28850	0.79	-1.6
6,277,567	-		AO353_28850	0.79	-0.1
6,277,648	+		AO353_28850	0.87	-0.2
6,277,649	-		AO353_28850	0.88	-0.9
6,277,649	-		AO353_28850	0.88	+0.5
6,277,649	-		AO353_28850	0.88	+0.6
6,277,759	+				+0.3
6,277,765	+				-1.2
6,277,814	+				+0.1
6,277,915	+				-1.1
6,277,915	+				-1.1
6,277,915	+				+0.4
6,277,916	-				-1.2
6,278,072	+		AO353_28855	0.17	-0.4
6,278,072	+		AO353_28855	0.17	+2.1
6,278,072	+		AO353_28855	0.17	+2.0
6,278,072	+		AO353_28855	0.17	-0.2
6,278,072	+		AO353_28855	0.17	-1.5
6,278,072	+		AO353_28855	0.17	+1.7
6,278,072	+		AO353_28855	0.17	-1.1
6,278,073	-		AO353_28855	0.17	+1.4
6,278,073	-		AO353_28855	0.17	-2.1
6,278,073	-		AO353_28855	0.17	+0.1
6,278,073	-		AO353_28855	0.17	+0.3
6,278,073	-		AO353_28855	0.17	-0.1
6,278,073	-		AO353_28855	0.17	+0.8
6,278,073	-		AO353_28855	0.17	+0.8
6,278,147	+		AO353_28855	0.23	-0.4
6,278,147	+		AO353_28855	0.23	-0.5
6,278,147	+		AO353_28855	0.23	+0.7
6,278,148	-		AO353_28855	0.23	+1.2
6,278,148	-		AO353_28855	0.23	+0.5
6,278,150	+		AO353_28855	0.24	-1.9
6,278,150	+		AO353_28855	0.24	+2.0
6,278,150	+		AO353_28855	0.24	-0.9
6,278,179	-		AO353_28855	0.26	-2.3
6,278,179	-		AO353_28855	0.26	-0.8
6,278,179	-		AO353_28855	0.26	+1.0
6,278,291	+		AO353_28855	0.35	-0.3
6,278,291	+		AO353_28855	0.35	-0.2
6,278,319	+		AO353_28855	0.38	+0.4
6,278,319	+		AO353_28855	0.38	-0.8
6,278,372	+		AO353_28855	0.42	+0.5
6,278,372	+		AO353_28855	0.42	+1.1
6,278,372	+		AO353_28855	0.42	+2.9
6,278,373	-		AO353_28855	0.42	+0.3
6,278,373	-		AO353_28855	0.42	+0.3
6,278,456	+				+1.5
6,278,456	+		AO353_28855	0.49	-2.0
6,278,457	-		AO353_28855	0.49	-0.9
6,278,457	-		AO353_28855	0.49	+1.8
6,278,457	-		AO353_28855	0.49	-1.8
6,278,458	+		AO353_28855	0.49	+0.8
6,278,458	+		AO353_28855	0.49	-0.2
6,278,458	+		AO353_28855	0.49	+0.4
6,278,458	+		AO353_28855	0.49	+1.3
6,278,458	+		AO353_28855	0.49	-0.9
6,278,458	+		AO353_28855	0.49	-0.7
6,278,458	+		AO353_28855	0.49	+1.4
6,278,458	+		AO353_28855	0.49	+1.0
6,278,458	+		AO353_28855	0.49	+1.0
6,278,458	+		AO353_28855	0.49	+1.4
6,278,458	+		AO353_28855	0.49	+1.3
6,278,458	+		AO353_28855	0.49	+1.7
6,278,459	-		AO353_28855	0.49	+0.7
6,278,459	-		AO353_28855	0.49	-1.5
6,278,581	+		AO353_28855	0.59	+0.3
6,278,581	+		AO353_28855	0.59	-1.1
6,278,582	-		AO353_28855	0.59	-2.0
6,278,582	-		AO353_28855	0.59	-1.3
6,278,590	+		AO353_28855	0.60	-2.0
6,278,590	+		AO353_28855	0.60	+1.1
6,278,590	+		AO353_28855	0.60	+0.5
6,278,590	+		AO353_28855	0.60	+0.8
6,278,590	+		AO353_28855	0.60	-1.4
6,278,590	+		AO353_28855	0.60	-2.2
6,278,590	+		AO353_28855	0.60	-1.9
6,278,590	+		AO353_28855	0.60	-0.1
6,278,590	+				-0.2
6,278,590	+		AO353_28855	0.60	-0.7
6,278,590	+		AO353_28855	0.60	-1.1
6,278,590	+		AO353_28855	0.60	-0.1
6,278,590	+		AO353_28855	0.60	-0.9
6,278,591	+		AO353_28855	0.60	+2.1
6,278,591	-		AO353_28855	0.60	+1.6
6,278,591	-		AO353_28855	0.60	+0.6
6,278,591	-		AO353_28855	0.60	+1.4
6,278,591	-		AO353_28855	0.60	-2.5
6,278,591	-		AO353_28855	0.60	-0.5
6,278,591	-		AO353_28855	0.60	+0.5
6,278,591	-		AO353_28855	0.60	+0.6
6,278,591	-		AO353_28855	0.60	+0.2
6,278,591	-		AO353_28855	0.60	-0.7
6,278,591	-				+1.1
6,278,591	-		AO353_28855	0.60	+2.1
6,278,592	+		AO353_28855	0.60	+2.4
6,278,592	+		AO353_28855	0.60	+0.8
6,278,592	+		AO353_28855	0.60	-2.8
6,278,592	+		AO353_28855	0.60	+0.7
6,278,592	+		AO353_28855	0.60	-0.4
6,278,592	+		AO353_28855	0.60	-0.6
6,278,592	+		AO353_28855	0.60	+0.4
6,278,592	+		AO353_28855	0.60	-0.5
6,278,592	+		AO353_28855	0.60	-1.6
6,278,592	+		AO353_28855	0.60	-0.5
6,278,592	+				+1.5
6,278,592	+		AO353_28855	0.60	+3.7
6,278,592	+		AO353_28855	0.60	+0.6
6,278,592	+		AO353_28855	0.60	+0.4
6,278,592	+		AO353_28855	0.60	+1.7
6,278,592	+		AO353_28855	0.60	-0.1
6,278,592	+				+2.7
6,278,592	+		AO353_28855	0.60	+2.2
6,278,592	+		AO353_28855	0.60	-0.1
6,278,592	+		AO353_28855	0.60	+1.5
6,278,592	+		AO353_28855	0.60	-1.0
6,278,592	+		AO353_28855	0.60	-1.2
6,278,593	-		AO353_28855	0.60	+1.6
6,278,593	-		AO353_28855	0.60	-2.5
6,278,593	-		AO353_28855	0.60	-0.5
6,278,593	-		AO353_28855	0.60	-1.2
6,278,593	-		AO353_28855	0.60	+1.0
6,278,593	-		AO353_28855	0.60	-1.2
6,278,593	-		AO353_28855	0.60	+1.9
6,278,593	-		AO353_28855	0.60	+0.5
6,278,593	-		AO353_28855	0.60	+0.2
6,278,593	-		AO353_28855	0.60	-1.7
6,278,593	-		AO353_28855	0.60	-0.4
6,278,593	-		AO353_28855	0.60	-0.0
6,278,593	-		AO353_28855	0.60	-0.2
6,278,593	-		AO353_28855	0.60	-1.1
6,278,593	-		AO353_28855	0.60	-3.8
6,278,593	-		AO353_28855	0.60	+1.5
6,278,593	-		AO353_28855	0.60	+0.3
6,278,593	-		AO353_28855	0.60	+0.5
6,278,593	-		AO353_28855	0.60	-0.8
6,278,593	-		AO353_28855	0.60	-1.9
6,278,596	+		AO353_28855	0.61	+1.9
6,278,596	+		AO353_28855	0.61	+5.0
6,278,596	+		AO353_28855	0.61	+0.8
6,278,596	+		AO353_28855	0.61	+0.5
6,278,596	+		AO353_28855	0.61	-2.0
6,278,596	+		AO353_28855	0.61	-1.1
6,278,596	+		AO353_28855	0.61	-2.8
6,278,596	+		AO353_28855	0.61	-0.4
6,278,596	+		AO353_28855	0.61	+0.0
6,278,596	+		AO353_28855	0.61	-0.5
6,278,596	+		AO353_28855	0.61	+0.4
6,278,596	+		AO353_28855	0.61	+0.4
6,278,597	-				+2.5
6,278,597	-		AO353_28855	0.61	-0.7
6,278,597	-		AO353_28855	0.61	+0.0
6,278,597	-		AO353_28855	0.61	-1.1
6,278,597	-		AO353_28855	0.61	+1.5
6,278,597	-		AO353_28855	0.61	-0.6
6,278,597	-		AO353_28855	0.61	+1.9
6,278,597	-		AO353_28855	0.61	+1.8
6,278,597	-		AO353_28855	0.61	+0.9
6,278,597	-		AO353_28855	0.61	-0.8
6,278,597	-		AO353_28855	0.61	-0.3
6,278,597	-		AO353_28855	0.61	+1.1
6,278,597	-		AO353_28855	0.61	+1.1
6,278,597	-		AO353_28855	0.61	-0.2
6,278,597	-		AO353_28855	0.61	+2.4
6,278,597	-		AO353_28855	0.61	+1.1
6,278,597	-		AO353_28855	0.61	+0.5
6,278,597	-		AO353_28855	0.61	-2.4
6,278,597	-		AO353_28855	0.61	+0.6
6,278,597	-		AO353_28855	0.61	-0.3
6,278,598	+		AO353_28855	0.61	-1.7
6,278,599	-		AO353_28855	0.61	+0.4
6,278,599	-		AO353_28855	0.61	-0.2
6,278,599	-		AO353_28855	0.61	+0.6
6,278,599	-		AO353_28855	0.61	+0.0
6,278,639	+		AO353_28855	0.64	-2.4
6,278,639	+		AO353_28855	0.64	-0.9
6,278,640	-		AO353_28855	0.64	+1.2
6,278,640	-		AO353_28855	0.64	-0.1
6,278,640	-		AO353_28855	0.64	-0.7
6,278,640	-		AO353_28855	0.64	-1.1
6,278,685	-		AO353_28855	0.68	-1.8
6,278,685	-		AO353_28855	0.68	+1.2
6,278,685	-		AO353_28855	0.68	-0.4
6,278,685	-		AO353_28855	0.68	-0.7