Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_20760

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
4,550,063	+				-1.1
4,550,064	-				+1.4
4,550,067	+				-0.6
4,550,068	-				+0.7
4,550,068	-				-0.1
4,550,068	-				+0.8
4,550,068	-				-0.8
4,550,068	-				-0.2
4,550,081	-				-0.1
4,550,089	+				-0.3
4,550,092	+				+0.2
4,550,092	+				+1.0
4,550,092	+				+0.4
4,550,092	+				-1.7
4,550,093	-				-0.5
4,550,093	-				+0.0
4,550,093	-				-0.8
4,550,093	-				-0.7
4,550,093	-				-1.7
4,550,093	-				-1.5
4,550,093	-				+1.5
4,550,093	-				+1.4
4,550,127	+				-1.1
4,550,147	+				+0.3
4,550,148	-				+1.0
4,550,148	-				+0.9
4,550,148	-				+1.0
4,550,148	-				-0.8
4,550,148	-				-0.9
4,550,156	+				-0.0
4,550,156	+				-1.0
4,550,157	-				+0.7
4,550,157	-				-1.7
4,550,160	+				-0.4
4,550,160	+				-0.4
4,550,160	+				+2.2
4,550,161	-				-1.7
4,550,161	-				+0.7
4,550,192	+				-2.1
4,550,192	+				-1.8
4,550,192	+				-2.1
4,550,192	+				-1.4
4,550,192	+				-2.1
4,550,192	+				+0.3
4,550,192	+				-1.1
4,550,192	+				-1.4
4,550,192	+				-0.9
4,550,192	+				-0.1
4,550,192	+				-1.4
4,550,192	+				-0.8
4,550,192	+				-0.6
4,550,193	-				+2.9
4,550,193	-				+1.4
4,550,193	-				+2.0
4,550,193	-				+0.4
4,550,193	-				-1.0
4,550,193	-				+0.6
4,550,193	-				+0.8
4,550,193	-				-0.8
4,550,193	-				+1.4
4,550,193	-				+0.4
4,550,193	-				+0.0
4,550,193	-				+2.2
4,550,193	-				-1.8
4,550,193	-				+1.4
4,550,193	-				+1.3
4,550,193	-				-0.8
4,550,214	+				-0.6
4,550,214	+				+0.2
4,550,214	+				+0.7
4,550,214	+				+0.2
4,550,214	+				+0.5
4,550,215	-				-2.1
4,550,236	+				-0.0
4,550,237	-				-2.5
4,550,237	-				+0.3
4,550,320	-				-1.7
4,550,320	-				-1.2
4,550,523	+		AO353_20755	0.36	-1.3
4,550,524	-		AO353_20755	0.37	+0.2
4,550,539	+		AO353_20755	0.39	-0.9
4,550,539	+		AO353_20755	0.39	-0.2
4,550,539	+		AO353_20755	0.39	+0.0
4,550,539	+		AO353_20755	0.39	-0.9
4,550,539	+		AO353_20755	0.39	-1.9
4,550,539	+		AO353_20755	0.39	+1.0
4,550,539	+		AO353_20755	0.39	-1.3
4,550,539	+		AO353_20755	0.39	+0.5
4,550,539	+		AO353_20755	0.39	+1.1
4,550,539	+		AO353_20755	0.39	-0.9
4,550,540	-		AO353_20755	0.39	+0.2
4,550,540	-		AO353_20755	0.39	+0.0
4,550,540	-		AO353_20755	0.39	-1.2
4,550,543	+		AO353_20755	0.39	-0.4
4,550,543	+		AO353_20755	0.39	-1.6
4,550,543	+		AO353_20755	0.39	-0.6
4,550,543	+		AO353_20755	0.39	-1.3
4,550,543	+		AO353_20755	0.39	-1.9
4,550,543	+		AO353_20755	0.39	+0.1
4,550,543	+		AO353_20755	0.39	-0.5
4,550,543	+		AO353_20755	0.39	-0.5
4,550,543	+		AO353_20755	0.39	+1.8
4,550,544	-		AO353_20755	0.39	-0.9
4,550,544	-		AO353_20755	0.39	+0.9
4,550,544	-		AO353_20755	0.39	-0.3
4,550,544	-		AO353_20755	0.39	-1.2
4,550,544	-		AO353_20755	0.39	-0.2
4,550,544	-		AO353_20755	0.39	-0.6
4,550,544	-		AO353_20755	0.39	-2.9
4,550,544	-		AO353_20755	0.39	-1.5
4,550,573	-		AO353_20755	0.43	-3.0
4,550,602	+		AO353_20755	0.47	+1.9
4,550,602	+		AO353_20755	0.47	+1.8
4,550,602	+		AO353_20755	0.47	-1.6
4,550,602	+		AO353_20755	0.47	+0.6
4,550,602	+		AO353_20755	0.47	-0.1
4,550,602	+		AO353_20755	0.47	-0.5
4,550,602	+		AO353_20755	0.47	+0.2
4,550,602	+		AO353_20755	0.47	+0.4
4,550,602	+		AO353_20755	0.47	+0.4
4,550,602	+		AO353_20755	0.47	-2.5
4,550,602	+		AO353_20755	0.47	-0.5
4,550,602	+		AO353_20755	0.47	+0.9
4,550,602	+		AO353_20755	0.47	+1.4
4,550,602	+		AO353_20755	0.47	+1.9
4,550,602	+		AO353_20755	0.47	-0.7
4,550,602	+		AO353_20755	0.47	-1.1
4,550,602	+		AO353_20755	0.47	-0.7
4,550,602	+		AO353_20755	0.47	+0.4
4,550,603	-		AO353_20755	0.47	-0.2
4,550,603	-		AO353_20755	0.47	-0.6
4,550,603	-		AO353_20755	0.47	+1.1
4,550,603	-		AO353_20755	0.47	-0.7
4,550,603	-		AO353_20755	0.47	-2.3
4,550,603	-		AO353_20755	0.47	+1.7
4,550,603	-		AO353_20755	0.47	-0.1
4,550,603	-		AO353_20755	0.47	+0.1
4,550,642	+		AO353_20755	0.53	+1.0
4,550,642	+		AO353_20755	0.53	-0.1
4,550,643	-		AO353_20755	0.53	-1.1
4,550,643	-		AO353_20755	0.53	-1.6
4,550,643	-		AO353_20755	0.53	+0.1
4,550,652	+		AO353_20755	0.54	+0.2
4,550,748	+		AO353_20755	0.67	-0.4
4,550,748	+		AO353_20755	0.67	-2.2
4,550,748	+		AO353_20755	0.67	-1.8
4,550,748	+		AO353_20755	0.67	+1.0
4,550,749	-		AO353_20755	0.68	+0.9
4,550,749	-		AO353_20755	0.68	+0.2
4,550,749	-		AO353_20755	0.68	-0.1
4,550,760	+		AO353_20755	0.69	+0.4
4,550,760	+		AO353_20755	0.69	+0.3
4,550,760	+		AO353_20755	0.69	+1.2
4,550,761	-		AO353_20755	0.69	-0.1
4,550,761	-		AO353_20755	0.69	+1.2
4,550,787	+		AO353_20755	0.73	+0.1
4,550,788	-		AO353_20755	0.73	+0.4
4,550,802	+		AO353_20755	0.75	-0.4
4,550,878	+		AO353_20755	0.85	-1.1
4,550,879	-		AO353_20755	0.86	-2.1
4,550,935	-				-2.2
4,550,946	+				+2.4
4,550,946	+				-1.1
4,550,946	+				-1.8
4,550,946	+				-1.4
4,550,946	+				-1.7
4,550,946	+				+3.1
4,550,946	+				-1.7
4,550,946	+				-1.5
4,550,946	+				+0.5
4,550,947	-				+0.8
4,550,947	-				+1.1
4,551,021	+		AO353_20760	0.12	+0.8
4,551,021	+		AO353_20760	0.12	-2.2
4,551,022	-		AO353_20760	0.13	-1.0
4,551,022	-		AO353_20760	0.13	-2.0
4,551,022	-		AO353_20760	0.13	-2.1
4,551,022	-		AO353_20760	0.13	+0.6
4,551,022	-		AO353_20760	0.13	-1.3
4,551,045	+		AO353_20760	0.25	+1.5
4,551,045	+		AO353_20760	0.25	+1.8
4,551,045	+		AO353_20760	0.25	+1.8
4,551,045	+		AO353_20760	0.25	+0.8
4,551,045	+		AO353_20760	0.25	-0.3
4,551,046	-		AO353_20760	0.26	-0.8
4,551,046	-		AO353_20760	0.26	-0.1
4,551,046	-		AO353_20760	0.26	-0.1
4,551,046	-		AO353_20760	0.26	+0.9
4,551,118	+		AO353_20760	0.65	+1.8
4,551,119	-		AO353_20760	0.66	-0.6
4,551,231	+				-0.3
4,551,231	+				+0.0
4,551,232	-				+0.7
4,551,301	-				-1.5
4,551,301	-				+2.9
4,551,337	+				-2.2
4,551,338	-				+0.6
4,551,338	-				+0.5
4,551,338	-				-0.5
4,551,339	+				+2.6
4,551,339	+				-1.0
4,551,339	+				-0.6
4,551,339	+				-1.0
4,551,339	+				+1.9
4,551,339	+				+0.2
4,551,339	+				+1.4
4,551,339	+				+0.3
4,551,339	+				+0.9
4,551,339	+				+0.3
4,551,339	+				-0.7
4,551,339	+				-0.9
4,551,340	-				+2.8
4,551,340	-				+0.5
4,551,340	-				+1.6
4,551,340	-				+0.6
4,551,340	-				-1.7
4,551,340	-				-0.8
4,551,340	-				+1.9
4,551,403	-		AO353_20765	0.11	-1.5
4,551,452	+		AO353_20765	0.20	+1.1
4,551,453	-		AO353_20765	0.20	+1.0
4,551,471	+		AO353_20765	0.23	+0.5
4,551,471	+		AO353_20765	0.23	-0.8
4,551,471	+		AO353_20765	0.23	-1.4
4,551,471	+		AO353_20765	0.23	-1.0
4,551,472	-		AO353_20765	0.23	-0.8
4,551,472	-		AO353_20765	0.23	-0.8
4,551,472	-		AO353_20765	0.23	-1.1
4,551,472	-		AO353_20765	0.23	+0.1
4,551,472	-		AO353_20765	0.23	-0.3
4,551,708	+		AO353_20765	0.66	-1.1
4,551,708	+		AO353_20765	0.66	+0.8
4,551,708	+		AO353_20765	0.66	+0.3
4,551,709	-		AO353_20765	0.66	-2.4
4,551,709	-		AO353_20765	0.66	-2.2
4,551,709	-		AO353_20765	0.66	-3.1
4,551,733	+		AO353_20765	0.71	-1.5
4,551,733	+		AO353_20765	0.71	-1.2
4,551,772	+		AO353_20765	0.78	-1.6
4,551,951	+				+0.6
4,551,951	+				+1.7
4,551,951	+				-2.7
4,551,952	-				-2.4
4,551,952	-				-1.0
4,551,952	-				+1.2
4,552,020	+				+0.4
4,552,020	+				-1.8
4,552,021	-				-1.0
4,552,021	-				+0.7
4,552,021	-				-1.1
4,552,021	-				-0.4
4,552,021	-				+0.1
4,552,029	+				-0.6
4,552,030	-				-2.0
4,552,051	+				+0.5
4,552,052	-				+2.9
4,552,052	-				-0.6
4,552,078	+		AO353_20770	0.13	-1.1
4,552,078	+		AO353_20770	0.13	-0.6
4,552,078	+		AO353_20770	0.13	-1.1
4,552,079	-		AO353_20770	0.13	+0.2
4,552,079	-		AO353_20770	0.13	-1.2
4,552,079	-		AO353_20770	0.13	+1.5
4,552,079	-		AO353_20770	0.13	+2.4
4,552,109	+		AO353_20770	0.28	+0.1
4,552,110	-		AO353_20770	0.29	-0.6
4,552,110	-		AO353_20770	0.29	+0.4