Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_19955

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
4,386,575	+				+0.7
4,386,575	+				+0.1
4,386,576	-				-0.0
4,386,676	+		AO353_19950	0.13	-0.1
4,386,676	+		AO353_19950	0.13	-1.4
4,386,676	+		AO353_19950	0.13	+2.3
4,386,676	+		AO353_19950	0.13	-1.9
4,386,677	-		AO353_19950	0.13	-0.4
4,386,677	-		AO353_19950	0.13	-0.4
4,386,677	-		AO353_19950	0.13	-0.8
4,386,677	-		AO353_19950	0.13	+1.6
4,386,677	-		AO353_19950	0.13	-0.8
4,386,677	-		AO353_19950	0.13	-1.8
4,386,677	-		AO353_19950	0.13	-0.6
4,386,677	-		AO353_19950	0.13	+1.1
4,386,677	-		AO353_19950	0.13	-0.7
4,386,677	-		AO353_19950	0.13	-0.0
4,386,749	-		AO353_19950	0.21	+2.2
4,386,811	+		AO353_19950	0.27	-1.1
4,386,811	+		AO353_19950	0.27	-0.3
4,386,811	+		AO353_19950	0.27	+1.3
4,386,811	+		AO353_19950	0.27	-1.8
4,386,811	+		AO353_19950	0.27	+0.7
4,386,811	+		AO353_19950	0.27	-1.6
4,386,811	+		AO353_19950	0.27	+0.6
4,386,811	+		AO353_19950	0.27	+0.2
4,386,811	+		AO353_19950	0.27	-1.0
4,386,811	+		AO353_19950	0.27	-0.8
4,386,811	+		AO353_19950	0.27	-0.3
4,386,811	+		AO353_19950	0.27	-1.3
4,386,811	+		AO353_19950	0.27	-0.0
4,386,811	+		AO353_19950	0.27	+0.3
4,386,812	-		AO353_19950	0.27	-0.5
4,386,812	-		AO353_19950	0.27	+0.7
4,386,812	-		AO353_19950	0.27	-1.7
4,386,812	-		AO353_19950	0.27	-0.6
4,386,812	-		AO353_19950	0.27	+1.5
4,386,812	-		AO353_19950	0.27	+0.3
4,386,812	-		AO353_19950	0.27	-0.0
4,386,812	-		AO353_19950	0.27	-0.3
4,386,812	-		AO353_19950	0.27	+0.1
4,386,812	-		AO353_19950	0.27	+1.8
4,386,812	-		AO353_19950	0.27	+0.5
4,386,812	-		AO353_19950	0.27	-1.3
4,386,812	-				+0.1
4,386,812	-		AO353_19950	0.27	-0.5
4,386,812	-		AO353_19950	0.27	+0.3
4,386,812	-		AO353_19950	0.27	-2.6
4,386,812	-		AO353_19950	0.27	+0.7
4,386,812	-		AO353_19950	0.27	-1.3
4,387,081	+		AO353_19950	0.54	-1.1
4,387,081	+		AO353_19950	0.54	-1.7
4,387,081	+		AO353_19950	0.54	-2.1
4,387,081	+		AO353_19950	0.54	-0.2
4,387,082	-		AO353_19950	0.54	-1.8
4,387,147	+		AO353_19950	0.61	-0.1
4,387,148	-		AO353_19950	0.61	+0.9
4,387,148	-		AO353_19950	0.61	-0.0
4,387,149	+		AO353_19950	0.61	+0.1
4,387,149	+		AO353_19950	0.61	-0.9
4,387,150	-		AO353_19950	0.61	-1.8
4,387,150	-		AO353_19950	0.61	-1.6
4,387,195	+		AO353_19950	0.66	-0.8
4,387,196	-		AO353_19950	0.66	+1.0
4,387,196	-		AO353_19950	0.66	-1.0
4,387,246	+		AO353_19950	0.71	-0.3
4,387,267	+		AO353_19950	0.73	-1.3
4,387,307	-		AO353_19950	0.77	-2.6
4,387,307	-		AO353_19950	0.77	+0.5
4,387,307	-		AO353_19950	0.77	+1.7
4,387,356	+		AO353_19950	0.82	+2.3
4,387,356	+		AO353_19950	0.82	-1.4
4,387,356	+		AO353_19950	0.82	-2.0
4,387,356	+		AO353_19950	0.82	-1.9
4,387,357	-		AO353_19950	0.82	+0.8
4,387,360	+		AO353_19950	0.83	-1.3
4,387,360	+		AO353_19950	0.83	+0.2
4,387,360	+		AO353_19950	0.83	+0.7
4,387,360	+		AO353_19950	0.83	-0.4
4,387,360	+		AO353_19950	0.83	+1.9
4,387,360	+		AO353_19950	0.83	-1.3
4,387,360	+		AO353_19950	0.83	+0.6
4,387,361	-		AO353_19950	0.83	-1.4
4,387,361	-		AO353_19950	0.83	-2.4
4,387,361	-		AO353_19950	0.83	+1.6
4,387,361	-		AO353_19950	0.83	-0.8
4,387,507	+				-0.0
4,387,507	+				+0.4
4,387,508	-				-1.8
4,387,508	-				+1.7
4,387,508	-				+2.8
4,387,508	-				-0.0
4,387,545	+				-2.1
4,387,630	-		AO353_19955	0.10	-1.6
4,387,641	+		AO353_19955	0.12	-3.0
4,387,641	+		AO353_19955	0.12	-0.8
4,387,641	+		AO353_19955	0.12	+1.0
4,387,642	-		AO353_19955	0.12	+1.5
4,387,642	-		AO353_19955	0.12	+1.2
4,387,642	-		AO353_19955	0.12	-0.0
4,387,642	-		AO353_19955	0.12	-1.0
4,387,642	-		AO353_19955	0.12	-1.3
4,387,642	-		AO353_19955	0.12	+0.2
4,387,642	-		AO353_19955	0.12	-0.3
4,387,642	-		AO353_19955	0.12	+0.5
4,387,685	+		AO353_19955	0.16	+0.3
4,387,686	-		AO353_19955	0.16	-1.6
4,387,765	+		AO353_19955	0.24	-0.8
4,387,766	-		AO353_19955	0.24	+0.7
4,387,766	-		AO353_19955	0.24	-1.5
4,387,838	+		AO353_19955	0.32	-1.7
4,387,838	+		AO353_19955	0.32	-1.9
4,387,838	+		AO353_19955	0.32	-0.3
4,387,838	+		AO353_19955	0.32	+0.2
4,387,838	+		AO353_19955	0.32	+0.8
4,387,838	+		AO353_19955	0.32	+1.2
4,387,838	+		AO353_19955	0.32	+2.6
4,387,838	+		AO353_19955	0.32	+2.3
4,387,838	+		AO353_19955	0.32	+1.3
4,387,838	+		AO353_19955	0.32	-0.4
4,387,838	+		AO353_19955	0.32	-0.5
4,387,838	+		AO353_19955	0.32	+0.7
4,387,839	-		AO353_19955	0.32	+0.5
4,387,839	-		AO353_19955	0.32	+1.6
4,387,839	-		AO353_19955	0.32	-0.3
4,387,839	-		AO353_19955	0.32	-0.0
4,387,839	-		AO353_19955	0.32	+0.3
4,387,839	-		AO353_19955	0.32	+0.7
4,387,839	-		AO353_19955	0.32	-0.6
4,387,839	-		AO353_19955	0.32	-3.5
4,387,839	-		AO353_19955	0.32	+1.7
4,387,839	-		AO353_19955	0.32	-1.9
4,387,839	-		AO353_19955	0.32	-1.0
4,387,938	+		AO353_19955	0.42	-1.9
4,388,058	+		AO353_19955	0.54	+0.5
4,388,058	+		AO353_19955	0.54	-2.0
4,388,058	+		AO353_19955	0.54	+0.8
4,388,552	+				+1.9
4,388,552	+				-1.8
4,388,553	-				+2.2
4,388,553	-				+1.3
4,388,553	-				-1.6
4,388,553	-				+2.0
4,388,669	+				+0.3
4,388,670	-				+0.6
4,388,670	-				+1.0
4,388,693	+		AO353_19960	0.12	+0.5
4,388,693	+		AO353_19960	0.12	+0.7
4,388,694	-		AO353_19960	0.12	+3.0
4,388,704	+		AO353_19960	0.13	-1.0
4,388,705	-		AO353_19960	0.13	+0.1
4,388,814	-		AO353_19960	0.23	-0.5
4,388,814	-		AO353_19960	0.23	-0.1
4,388,814	-		AO353_19960	0.23	+1.6
4,389,080	-		AO353_19960	0.46	-1.5
4,389,080	-		AO353_19960	0.46	+0.1
4,389,080	-		AO353_19960	0.46	-2.3
4,389,080	-		AO353_19960	0.46	+1.0
4,389,082	+		AO353_19960	0.47	-1.4
4,389,082	+		AO353_19960	0.47	+0.1
4,389,082	+		AO353_19960	0.47	+2.1
4,389,082	+		AO353_19960	0.47	+0.8
4,389,082	+		AO353_19960	0.47	-1.0
4,389,083	-		AO353_19960	0.47	-0.5
4,389,126	-		AO353_19960	0.51	+1.5
4,389,176	+				+2.3
4,389,176	+		AO353_19960	0.55	+1.6
4,389,176	+		AO353_19960	0.55	-3.4
4,389,176	+		AO353_19960	0.55	-0.1
4,389,177	-		AO353_19960	0.55	+0.9
4,389,214	+		AO353_19960	0.58	-1.3
4,389,214	+		AO353_19960	0.58	-1.5
4,389,268	-		AO353_19960	0.63	-2.0
4,389,339	+		AO353_19960	0.70	-1.0
4,389,339	+		AO353_19960	0.70	-1.4
4,389,339	+		AO353_19960	0.70	-1.9