Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_18635

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
4,100,516	+		AO353_18630	0.35	-1.4
4,100,517	-		AO353_18630	0.35	-0.4
4,100,517	-		AO353_18630	0.35	-3.0
4,100,539	-		AO353_18630	0.38	+0.9
4,100,544	+		AO353_18630	0.38	-0.5
4,100,545	-		AO353_18630	0.38	+0.5
4,100,553	+		AO353_18630	0.39	-1.1
4,100,553	+		AO353_18630	0.39	-1.3
4,100,553	+		AO353_18630	0.39	-1.2
4,100,553	+		AO353_18630	0.39	-1.2
4,100,553	+		AO353_18630	0.39	-0.6
4,100,553	+		AO353_18630	0.39	-1.9
4,100,553	+		AO353_18630	0.39	-1.6
4,100,553	+		AO353_18630	0.39	-1.4
4,100,553	+		AO353_18630	0.39	-2.7
4,100,553	+		AO353_18630	0.39	-1.6
4,100,553	+		AO353_18630	0.39	+0.4
4,100,553	+		AO353_18630	0.39	-2.5
4,100,553	+		AO353_18630	0.39	-0.3
4,100,554	-		AO353_18630	0.39	-3.6
4,100,554	-		AO353_18630	0.39	+0.2
4,100,554	-		AO353_18630	0.39	-3.1
4,100,554	-		AO353_18630	0.39	-2.7
4,100,554	-		AO353_18630	0.39	-0.2
4,100,554	-		AO353_18630	0.39	-0.8
4,100,554	-		AO353_18630	0.39	+0.3
4,100,554	-		AO353_18630	0.39	-3.1
4,100,651	+		AO353_18630	0.50	-2.1
4,100,993	+		AO353_18630	0.86	-2.3
4,100,994	-		AO353_18630	0.86	-2.7
4,100,994	-		AO353_18630	0.86	-2.1
4,101,105	-				-2.7
4,101,105	-				-0.9
4,101,105	-				+0.9
4,101,108	+				+0.9
4,101,108	+				-0.6
4,101,108	+				-1.4
4,101,108	+				-0.8
4,101,108	+				-2.3
4,101,109	-				-2.5
4,101,109	-				-2.9
4,101,109	-				-1.7
4,101,109	-				-1.9
4,101,109	-				-2.3
4,101,109	-				+1.7
4,101,109	-				+0.2
4,101,142	+				-2.6
4,101,143	-				-0.6
4,101,288	+				-2.5
4,101,288	+				-0.6
4,101,288	+				-1.8
4,101,288	+				+0.8
4,101,289	-				-0.1
4,101,289	-				-2.1
4,101,292	+				-0.5
4,101,292	+				+2.0
4,101,292	+				-1.3
4,101,292	+				+0.1
4,101,292	+				-2.8
4,101,292	+				-0.6
4,101,292	+				-0.3
4,101,292	+				-1.1
4,101,292	+				-0.3
4,101,293	-				-1.4
4,101,293	-				-2.2
4,101,293	-				+0.6
4,101,293	-				-2.3
4,101,293	-				-0.1
4,101,293	-				-0.6
4,101,293	-				-0.8
4,101,295	+				+1.5
4,101,295	+				-0.4
4,101,295	+				+0.7
4,101,296	-				-1.1
4,101,296	-				-1.3
4,101,296	-				-3.5
4,101,296	-				-0.8
4,101,296	-				-3.1
4,101,296	-				-2.4
4,101,385	-				-1.6
4,101,385	-				-2.2
4,101,385	-				-3.4
4,101,583	+		AO353_18635	0.15	+1.5
4,101,584	-		AO353_18635	0.15	-3.1
4,101,584	-		AO353_18635	0.15	-1.6
4,101,716	+		AO353_18635	0.24	-2.5
4,101,716	+		AO353_18635	0.24	-3.1
4,101,717	-		AO353_18635	0.24	-2.6
4,101,717	-		AO353_18635	0.24	-0.6
4,101,760	+		AO353_18635	0.27	-3.0
4,101,760	+		AO353_18635	0.27	-0.6
4,101,760	+		AO353_18635	0.27	-2.0
4,101,760	+		AO353_18635	0.27	+0.8
4,101,761	-		AO353_18635	0.27	-2.1
4,101,761	-		AO353_18635	0.27	+0.7
4,101,761	-		AO353_18635	0.27	-0.1
4,101,761	-		AO353_18635	0.27	-0.9
4,101,761	-		AO353_18635	0.27	-3.1
4,101,761	-		AO353_18635	0.27	-2.7
4,101,800	-		AO353_18635	0.30	-1.3
4,101,802	+		AO353_18635	0.30	-0.1
4,101,802	+		AO353_18635	0.30	-3.7
4,101,802	+		AO353_18635	0.30	-1.6
4,101,803	-		AO353_18635	0.30	-1.7
4,101,803	-		AO353_18635	0.30	-2.1
4,101,803	-		AO353_18635	0.30	-1.9
4,102,077	+		AO353_18635	0.49	-1.9
4,102,077	+		AO353_18635	0.49	+1.7
4,102,077	+		AO353_18635	0.49	-0.6
4,102,077	+		AO353_18635	0.49	-3.3
4,102,077	+		AO353_18635	0.49	-0.3
4,102,081	+		AO353_18635	0.49	-2.3
4,102,081	+		AO353_18635	0.49	-1.9
4,102,082	-		AO353_18635	0.49	-1.6
4,102,082	-		AO353_18635	0.49	-1.9
4,102,135	-		AO353_18635	0.53	-1.7
4,102,324	+		AO353_18635	0.66	-1.1
4,102,324	+		AO353_18635	0.66	-0.9
4,102,358	+		AO353_18635	0.68	-0.5
4,102,358	+		AO353_18635	0.68	-1.2
4,102,358	+		AO353_18635	0.68	-2.3
4,102,358	+		AO353_18635	0.68	-2.8
4,102,358	+		AO353_18635	0.68	-2.9
4,102,358	+		AO353_18635	0.68	-0.8
4,102,358	+		AO353_18635	0.68	-3.7
4,102,358	+		AO353_18635	0.68	-2.3
4,102,358	+		AO353_18635	0.68	-1.7
4,102,358	+		AO353_18635	0.68	-0.5
4,102,358	+		AO353_18635	0.68	-0.1
4,102,359	-		AO353_18635	0.68	-2.2
4,102,359	-		AO353_18635	0.68	+1.2
4,102,359	-		AO353_18635	0.68	-3.3
4,102,359	-		AO353_18635	0.68	-1.8
4,102,359	-		AO353_18635	0.68	-2.2
4,102,359	-		AO353_18635	0.68	-1.7
4,102,359	-		AO353_18635	0.68	-2.4
4,102,359	-		AO353_18635	0.68	-2.0
4,102,359	-		AO353_18635	0.68	-2.9
4,102,359	-		AO353_18635	0.68	-0.9
4,102,436	+		AO353_18635	0.74	+0.5
4,102,436	+		AO353_18635	0.74	+0.7
4,102,436	+		AO353_18635	0.74	-2.4
4,102,436	+		AO353_18635	0.74	-1.7
4,102,437	-		AO353_18635	0.74	-2.1
4,102,437	-		AO353_18635	0.74	-1.5
4,102,437	-		AO353_18635	0.74	-1.2
4,102,437	-		AO353_18635	0.74	-2.4
4,102,437	-		AO353_18635	0.74	+0.2
4,102,798	-				-3.0
4,102,814	+				-1.6
4,102,814	+				-1.3
4,102,815	-				-1.0
4,102,815	-				-1.7
4,102,815	-				-2.3
4,102,815	-				-2.0
4,102,818	-				-0.8
4,102,830	+				+1.3
4,102,830	+				-0.9
4,102,830	+				-2.7
4,102,831	-				-2.5
4,102,831	-				-3.0
4,102,831	-				-1.0
4,102,850	+				-3.3
4,102,850	+				-1.7
4,102,850	+				-2.1
4,102,850	+				-1.3
4,102,851	-				-0.0
4,102,851	-				+0.0
4,103,014	+		AO353_18640	0.36	-2.0
4,103,014	+		AO353_18640	0.36	+0.5
4,103,015	-		AO353_18640	0.36	-2.5
4,103,069	-		AO353_18640	0.51	+0.5
4,103,104	+		AO353_18640	0.61	-0.8
4,103,104	+		AO353_18640	0.61	+0.2
4,103,104	+		AO353_18640	0.61	-0.0
4,103,104	+		AO353_18640	0.61	+1.3
4,103,104	+		AO353_18640	0.61	+0.4
4,103,105	-		AO353_18640	0.62	-0.6
4,103,181	+		AO353_18640	0.83	-0.6
4,103,181	+		AO353_18640	0.83	-1.6
4,103,182	-		AO353_18640	0.83	+0.6
4,103,182	-		AO353_18640	0.83	+0.6
4,103,182	-		AO353_18640	0.83	-1.9
4,103,199	+		AO353_18640	0.88	-0.5
4,103,199	+		AO353_18640	0.88	-0.8
4,103,200	-		AO353_18640	0.89	+0.1
4,103,200	-		AO353_18640	0.89	+0.6
4,103,200	-		AO353_18640	0.89	-0.4
4,103,200	-		AO353_18640	0.89	-0.6
4,103,329	+				+0.6
4,103,330	-				-3.1
4,103,345	-				-1.8
4,103,649	+		AO353_18645	0.23	-0.0
4,103,649	+		AO353_18645	0.23	-0.3
4,103,649	+		AO353_18645	0.23	-2.6
4,103,649	+		AO353_18645	0.23	+0.5
4,103,650	-		AO353_18645	0.23	-0.8
4,103,653	+		AO353_18645	0.24	-1.0
4,103,653	+		AO353_18645	0.24	-1.4
4,103,653	+		AO353_18645	0.24	-3.1
4,103,653	+				+0.2
4,103,653	+		AO353_18645	0.24	-0.2
4,103,653	+		AO353_18645	0.24	-1.4
4,103,653	+		AO353_18645	0.24	-0.8
4,103,653	+		AO353_18645	0.24	-0.7
4,103,653	+		AO353_18645	0.24	-0.9
4,103,654	-				+2.5
4,103,654	-		AO353_18645	0.24	-0.8
4,103,654	-		AO353_18645	0.24	-3.4
4,103,654	-		AO353_18645	0.24	-1.3
4,103,654	-		AO353_18645	0.24	-0.3
4,103,654	-		AO353_18645	0.24	-1.2
4,103,654	-		AO353_18645	0.24	-1.5
4,103,654	-		AO353_18645	0.24	+1.5
4,103,654	-		AO353_18645	0.24	-1.7
4,103,654	-		AO353_18645	0.24	+1.4
4,103,654	-		AO353_18645	0.24	-1.0
4,103,654	-		AO353_18645	0.24	-0.8
4,103,654	-		AO353_18645	0.24	-1.7
4,103,654	-		AO353_18645	0.24	+0.0
4,103,654	-		AO353_18645	0.24	-3.3
4,103,654	-		AO353_18645	0.24	-1.5
4,103,741	+		AO353_18645	0.30	-2.0
4,103,741	+		AO353_18645	0.30	-2.1
4,103,741	+		AO353_18645	0.30	-0.5
4,103,741	+		AO353_18645	0.30	-1.5
4,103,741	+		AO353_18645	0.30	-1.5
4,103,741	+		AO353_18645	0.30	+0.5
4,103,741	+		AO353_18645	0.30	-0.9
4,103,741	+		AO353_18645	0.30	-1.0
4,103,741	+		AO353_18645	0.30	-0.0
4,103,741	+		AO353_18645	0.30	+0.5
4,103,741	+		AO353_18645	0.30	-2.7
4,103,741	+		AO353_18645	0.30	-2.3
4,103,741	+		AO353_18645	0.30	-1.9
4,103,741	+		AO353_18645	0.30	-0.9
4,103,742	-		AO353_18645	0.30	+0.1
4,103,742	-		AO353_18645	0.30	-0.9
4,103,742	-		AO353_18645	0.30	-1.2
4,103,742	-		AO353_18645	0.30	+0.2
4,103,742	-		AO353_18645	0.30	-2.6
4,103,742	-		AO353_18645	0.30	-3.3
4,103,742	-		AO353_18645	0.30	-0.8
4,103,742	-		AO353_18645	0.30	-2.5
4,103,742	-		AO353_18645	0.30	-0.9
4,103,742	-		AO353_18645	0.30	-0.5
4,103,742	-		AO353_18645	0.30	-0.9
4,103,742	-		AO353_18645	0.30	-2.7
4,103,742	-		AO353_18645	0.30	-1.4
4,103,742	-		AO353_18645	0.30	-0.8
4,103,742	-		AO353_18645	0.30	-2.0
4,103,742	-		AO353_18645	0.30	-2.0
4,103,760	+		AO353_18645	0.31	+1.0
4,103,760	+		AO353_18645	0.31	-1.4
4,103,760	+		AO353_18645	0.31	+0.5
4,103,760	+		AO353_18645	0.31	-2.0
4,103,760	+		AO353_18645	0.31	-0.8
4,103,761	-		AO353_18645	0.31	-1.4
4,103,761	-		AO353_18645	0.31	-0.0
4,103,804	+		AO353_18645	0.34	-1.6
4,103,805	-		AO353_18645	0.35	-1.5