Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_14630

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
3,242,445	+		AO353_14620	0.85	+0.7
3,242,454	+		AO353_14620	0.85	-0.0
3,242,454	+		AO353_14620	0.85	+0.3
3,242,454	+		AO353_14620	0.85	+0.1
3,242,454	+		AO353_14620	0.85	+1.4
3,242,455	-		AO353_14620	0.85	+1.5
3,242,455	-		AO353_14620	0.85	-0.9
3,242,455	-		AO353_14620	0.85	+0.1
3,242,455	-		AO353_14620	0.85	-1.5
3,242,458	+		AO353_14620	0.86	+0.1
3,242,458	+		AO353_14620	0.86	-2.3
3,242,458	+		AO353_14620	0.86	-0.3
3,242,458	+		AO353_14620	0.86	-0.7
3,242,458	+		AO353_14620	0.86	-0.8
3,242,459	-		AO353_14620	0.86	+0.6
3,242,459	-		AO353_14620	0.86	-0.9
3,242,487	+		AO353_14620	0.88	-0.2
3,242,587	+				-1.0
3,242,587	+				-0.1
3,242,588	-				+0.2
3,242,588	-				+0.7
3,242,660	+				-1.9
3,242,661	-				-0.9
3,242,661	-				-1.1
3,242,747	+		AO353_14625	0.18	+3.4
3,242,747	+		AO353_14625	0.18	+1.2
3,242,748	-		AO353_14625	0.18	-1.7
3,242,748	-		AO353_14625	0.18	+1.6
3,242,864	+		AO353_14625	0.41	+1.1
3,242,864	+		AO353_14625	0.41	+2.1
3,242,864	+		AO353_14625	0.41	-0.6
3,242,864	+		AO353_14625	0.41	+2.7
3,242,864	+		AO353_14625	0.41	+1.9
3,242,864	+		AO353_14625	0.41	-0.8
3,242,864	+		AO353_14625	0.41	-0.4
3,242,864	+		AO353_14625	0.41	-2.1
3,242,865	-		AO353_14625	0.41	-0.4
3,242,865	-		AO353_14625	0.41	-0.9
3,242,865	-		AO353_14625	0.41	-0.1
3,242,865	-		AO353_14625	0.41	-1.7
3,242,865	-		AO353_14625	0.41	-0.3
3,242,865	-		AO353_14625	0.41	+1.0
3,242,872	-		AO353_14625	0.42	-0.5
3,242,892	+		AO353_14625	0.46	-1.0
3,242,892	+		AO353_14625	0.46	+2.0
3,242,892	+		AO353_14625	0.46	+1.6
3,242,893	-		AO353_14625	0.47	-0.8
3,242,893	-		AO353_14625	0.47	+0.0
3,242,911	+		AO353_14625	0.50	+0.5
3,242,960	+		AO353_14625	0.59	+1.3
3,243,015	+		AO353_14625	0.70	+0.8
3,243,015	+		AO353_14625	0.70	-0.7
3,243,015	+		AO353_14625	0.70	-0.0
3,243,016	-		AO353_14625	0.70	-0.5
3,243,016	-		AO353_14625	0.70	-1.3
3,243,047	+		AO353_14625	0.76	+1.6
3,243,047	+		AO353_14625	0.76	-0.5
3,243,047	+		AO353_14625	0.76	-0.7
3,243,047	+		AO353_14625	0.76	+1.0
3,243,047	+		AO353_14625	0.76	-2.9
3,243,047	+		AO353_14625	0.76	+0.7
3,243,048	-		AO353_14625	0.77	+0.2
3,243,048	-		AO353_14625	0.77	-1.5
3,243,048	-		AO353_14625	0.77	-1.4
3,243,048	-		AO353_14625	0.77	+1.4
3,243,048	-		AO353_14625	0.77	-0.1
3,243,080	+		AO353_14625	0.83	+0.5
3,243,080	+		AO353_14625	0.83	+0.6
3,243,080	+		AO353_14625	0.83	+0.0
3,243,080	+		AO353_14625	0.83	-0.0
3,243,080	+		AO353_14625	0.83	+0.5
3,243,080	+		AO353_14625	0.83	-0.0
3,243,080	+		AO353_14625	0.83	-1.3
3,243,080	+		AO353_14625	0.83	+0.3
3,243,080	+		AO353_14625	0.83	+0.7
3,243,081	-		AO353_14625	0.83	+0.8
3,243,081	-		AO353_14625	0.83	-1.5
3,243,081	-		AO353_14625	0.83	+2.5
3,243,081	-		AO353_14625	0.83	-1.5
3,243,081	-		AO353_14625	0.83	+0.7
3,243,081	-		AO353_14625	0.83	-1.0
3,243,081	-		AO353_14625	0.83	+1.3
3,243,081	-		AO353_14625	0.83	+2.0
3,243,081	-		AO353_14625	0.83	+1.4
3,243,145	+				+0.4
3,243,145	+				-0.5
3,243,146	-				-1.1
3,243,146	-				+1.6
3,243,184	+				+1.4
3,243,184	+				+1.9
3,243,184	+				-1.8
3,243,185	-				+2.4
3,243,185	-				+0.8
3,243,185	-				+2.1
3,243,185	-				+2.4
3,243,209	+				+0.7
3,243,209	+				+1.2
3,243,209	+				-1.5
3,243,209	+				-0.9
3,243,209	+				-1.2
3,243,209	+				-2.2
3,243,209	+				+1.8
3,243,209	+				-1.6
3,243,209	+				+0.4
3,243,209	+				+2.0
3,243,209	+				-0.6
3,243,209	+				+0.8
3,243,210	-				-0.7
3,243,210	-				-0.4
3,243,210	-				+0.5
3,243,210	-				+0.1
3,243,210	-				+0.2
3,243,210	-				-1.0
3,243,210	-				-0.2
3,243,211	+				+1.2
3,243,211	+				+1.7
3,243,211	+				-1.8
3,243,211	+				+1.0
3,243,211	+				-1.5
3,243,212	-				-0.8
3,243,212	-				-0.1
3,243,212	-				-0.9
3,243,212	-				-0.5
3,243,212	-				+0.0
3,243,263	+				-0.8
3,243,264	-				+1.1
3,243,264	-				+1.6
3,243,281	+				-0.7
3,243,282	-				-1.1
3,243,290	-				-1.2
3,243,337	+				-1.5
3,243,337	+				+0.5
3,243,337	+				+0.3
3,243,338	-				+1.9
3,243,338	-				+0.8
3,243,338	-				-2.0
3,243,389	+				+0.7
3,243,389	+				+1.0
3,243,390	-				-1.5
3,243,543	+		AO353_14630	0.12	-0.8
3,243,543	+		AO353_14630	0.12	-0.3
3,243,543	+		AO353_14630	0.12	-0.5
3,243,543	+		AO353_14630	0.12	-0.5
3,243,543	+		AO353_14630	0.12	-1.0
3,243,543	+		AO353_14630	0.12	-1.4
3,243,544	-		AO353_14630	0.12	-0.3
3,243,544	-		AO353_14630	0.12	-1.0
3,243,544	-		AO353_14630	0.12	+1.1
3,243,710	+		AO353_14630	0.25	-1.2
3,243,710	+		AO353_14630	0.25	+0.2
3,243,710	+		AO353_14630	0.25	-2.2
3,243,710	+		AO353_14630	0.25	+0.3
3,243,710	+		AO353_14630	0.25	+1.3
3,243,711	-		AO353_14630	0.25	+0.8
3,243,711	-		AO353_14630	0.25	+1.0
3,243,711	-		AO353_14630	0.25	+0.7
3,243,728	+		AO353_14630	0.26	+0.2
3,243,729	-		AO353_14630	0.26	+0.5
3,243,745	+		AO353_14630	0.28	+0.6
3,243,746	-		AO353_14630	0.28	-2.3
3,243,762	+		AO353_14630	0.29	+2.3
3,243,762	+		AO353_14630	0.29	-1.9
3,243,762	+		AO353_14630	0.29	-0.3
3,243,762	+		AO353_14630	0.29	+0.2
3,243,763	-		AO353_14630	0.29	+0.8
3,243,763	-		AO353_14630	0.29	+1.6
3,243,866	+		AO353_14630	0.37	+0.5
3,243,866	+		AO353_14630	0.37	+0.3
3,243,867	-		AO353_14630	0.37	-1.3
3,243,867	-		AO353_14630	0.37	-1.6
3,243,911	+		AO353_14630	0.40	-1.6
3,243,911	+		AO353_14630	0.40	-0.3
3,243,912	-		AO353_14630	0.40	-1.7
3,243,912	-		AO353_14630	0.40	-2.3
3,243,912	-		AO353_14630	0.40	+0.6
3,243,966	+		AO353_14630	0.44	-0.3
3,243,966	+		AO353_14630	0.44	+1.5
3,243,966	+		AO353_14630	0.44	+0.7
3,243,967	-		AO353_14630	0.44	+2.2
3,243,967	-		AO353_14630	0.44	-1.3
3,243,967	-		AO353_14630	0.44	+2.8
3,243,967	-		AO353_14630	0.44	-0.5
3,243,967	-		AO353_14630	0.44	-0.5
3,243,981	+		AO353_14630	0.46	+0.0
3,244,080	+		AO353_14630	0.53	-0.0
3,244,081	-		AO353_14630	0.53	+0.5
3,244,081	-		AO353_14630	0.53	-2.8
3,244,081	-		AO353_14630	0.53	+1.4
3,244,081	-		AO353_14630	0.53	-1.9
3,244,113	+		AO353_14630	0.56	+1.1
3,244,113	+		AO353_14630	0.56	+1.9
3,244,114	-		AO353_14630	0.56	+0.6
3,244,114	-		AO353_14630	0.56	+1.8
3,244,194	+		AO353_14630	0.62	-2.5
3,244,194	+		AO353_14630	0.62	+2.3
3,244,194	+		AO353_14630	0.62	+0.6
3,244,195	-		AO353_14630	0.62	+1.9
3,244,195	-		AO353_14630	0.62	+0.2
3,244,516	+		AO353_14630	0.86	+0.7
3,244,516	+		AO353_14630	0.86	+1.3
3,244,516	+		AO353_14630	0.86	+2.5
3,244,516	+		AO353_14630	0.86	-1.3
3,244,516	+		AO353_14630	0.86	+0.9
3,244,517	-		AO353_14630	0.86	-0.4
3,244,517	-		AO353_14630	0.86	+1.5
3,244,517	-		AO353_14630	0.86	-1.4
3,244,517	-		AO353_14630	0.86	+1.4
3,244,517	-		AO353_14630	0.86	-0.8
3,244,517	-		AO353_14630	0.86	-1.6
3,244,517	-		AO353_14630	0.86	-1.1
3,244,517	-		AO353_14630	0.86	+3.0
3,244,695	+				-0.6
3,244,695	+				+1.4
3,244,696	-				-3.0
3,244,855	+		AO353_14635	0.37	+1.1
3,244,855	+		AO353_14635	0.37	-1.2
3,244,855	+		AO353_14635	0.37	-0.5
3,244,855	+		AO353_14635	0.37	+1.9
3,244,856	-		AO353_14635	0.37	-0.7
3,244,856	-		AO353_14635	0.37	+0.3
3,244,856	-		AO353_14635	0.37	-0.2
3,244,856	-		AO353_14635	0.37	-0.4
3,244,856	-		AO353_14635	0.37	+0.5
3,244,856	-		AO353_14635	0.37	-0.2
3,244,856	-		AO353_14635	0.37	-2.2
3,244,856	-		AO353_14635	0.37	+0.8
3,244,856	-		AO353_14635	0.37	-2.8
3,244,996	+		AO353_14635	0.75	-0.1
3,244,996	+		AO353_14635	0.75	-0.5
3,244,997	-		AO353_14635	0.75	-1.5
3,244,997	-		AO353_14635	0.75	-1.4
3,245,078	-				-0.3
3,245,207	+				+0.2
3,245,207	+				-0.9
3,245,207	+				-0.8
3,245,208	-				-0.4
3,245,480	+		AO353_14640	0.39	+0.8
3,245,480	+		AO353_14640	0.39	-0.7
3,245,480	+		AO353_14640	0.39	+0.0
3,245,481	-		AO353_14640	0.39	+1.2
3,245,481	-		AO353_14640	0.39	-0.9
3,245,638	-		AO353_14640	0.59	-2.4
3,245,638	-		AO353_14640	0.59	+0.1
3,245,638	-		AO353_14640	0.59	-2.0
3,245,650	-		AO353_14640	0.60	+0.0