Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_13780

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
3,061,804	-				+0.7
3,061,840	+				+0.6
3,061,841	-				-0.1
3,061,947	+				-0.1
3,061,947	+				-0.3
3,061,975	+				-0.6
3,062,151	+		AO353_13775	0.24	-0.5
3,062,151	+		AO353_13775	0.24	-0.1
3,062,172	-		AO353_13775	0.29	+1.1
3,062,172	-		AO353_13775	0.29	-1.0
3,062,190	+		AO353_13775	0.33	-1.4
3,062,190	+		AO353_13775	0.33	-1.4
3,062,190	+		AO353_13775	0.33	-0.4
3,062,190	+		AO353_13775	0.33	+1.3
3,062,190	+		AO353_13775	0.33	-1.3
3,062,191	-		AO353_13775	0.33	+2.1
3,062,191	-		AO353_13775	0.33	+0.8
3,062,191	-		AO353_13775	0.33	-1.9
3,062,191	-		AO353_13775	0.33	-0.8
3,062,191	-		AO353_13775	0.33	+1.1
3,062,191	-		AO353_13775	0.33	+1.3
3,062,191	-		AO353_13775	0.33	+3.8
3,062,258	+		AO353_13775	0.48	-0.2
3,062,259	-		AO353_13775	0.49	+2.6
3,062,259	-		AO353_13775	0.49	+1.6
3,062,259	-		AO353_13775	0.49	-1.0
3,062,295	+		AO353_13775	0.57	+0.3
3,062,295	+		AO353_13775	0.57	+1.5
3,062,296	-		AO353_13775	0.57	-1.3
3,062,388	+		AO353_13775	0.77	-0.8
3,062,389	-		AO353_13775	0.78	+1.0
3,062,403	+		AO353_13775	0.81	-0.9
3,062,403	+		AO353_13775	0.81	-1.6
3,062,404	-		AO353_13775	0.81	+1.0
3,062,404	-		AO353_13775	0.81	-0.3
3,062,404	-		AO353_13775	0.81	-2.1
3,062,404	-		AO353_13775	0.81	+1.2
3,062,513	+				-0.9
3,062,513	+				-2.0
3,062,513	+				+0.2
3,062,513	+				-0.2
3,062,514	-				-0.0
3,062,514	-				-2.0
3,062,520	+				+1.2
3,062,521	-				-2.2
3,062,521	-				-0.6
3,062,521	-				+2.0
3,062,521	-				+0.4
3,062,521	-				-1.2
3,062,521	-				-1.1
3,062,521	-				+0.7
3,062,521	-				+0.7
3,062,521	-				+1.8
3,062,528	+				+1.5
3,062,528	+				-1.3
3,062,528	+				+1.1
3,062,528	+				+0.6
3,062,528	+				+1.8
3,062,528	+				-2.3
3,062,528	+				-2.1
3,062,528	+				+1.4
3,062,528	+				-0.9
3,062,528	+				-0.0
3,062,528	+				-0.6
3,062,528	+				-1.5
3,062,529	-				+0.4
3,062,529	-				+0.9
3,062,529	-				-1.1
3,062,529	-				-2.1
3,062,529	-				+0.6
3,062,529	-				-0.4
3,062,529	-				-1.5
3,062,529	-				+1.5
3,062,529	-				-0.6
3,062,529	-				-2.6
3,062,529	-				-0.8
3,062,529	-				-0.4
3,062,529	-				-1.2
3,062,629	+		AO353_13780	0.14	+2.7
3,062,629	+		AO353_13780	0.14	-0.6
3,062,629	+		AO353_13780	0.14	+2.7
3,062,629	+		AO353_13780	0.14	+1.5
3,062,629	+		AO353_13780	0.14	-0.6
3,062,630	-		AO353_13780	0.14	-0.3
3,062,630	-		AO353_13780	0.14	-1.0
3,062,630	-		AO353_13780	0.14	-0.7
3,062,675	+		AO353_13780	0.24	+0.1
3,062,675	+		AO353_13780	0.24	-0.9
3,062,675	+		AO353_13780	0.24	-2.7
3,062,675	+		AO353_13780	0.24	+0.2
3,062,675	+		AO353_13780	0.24	+1.9
3,062,675	+		AO353_13780	0.24	+2.0
3,062,675	+		AO353_13780	0.24	-1.1
3,062,676	-		AO353_13780	0.24	+0.9
3,062,676	-		AO353_13780	0.24	+0.9
3,062,676	-		AO353_13780	0.24	+0.3
3,062,676	-		AO353_13780	0.24	-2.0
3,062,676	-		AO353_13780	0.24	+0.4
3,062,676	-		AO353_13780	0.24	-1.8
3,062,755	+		AO353_13780	0.41	-0.4
3,062,755	+		AO353_13780	0.41	+1.0
3,062,755	+		AO353_13780	0.41	-1.5
3,062,755	+		AO353_13780	0.41	-0.2
3,062,755	+		AO353_13780	0.41	-1.2
3,062,755	+		AO353_13780	0.41	-0.7
3,062,755	+		AO353_13780	0.41	-0.3
3,062,755	+		AO353_13780	0.41	+0.9
3,062,756	-		AO353_13780	0.41	-2.0
3,062,756	-		AO353_13780	0.41	-1.2
3,062,889	+		AO353_13780	0.69	-1.0
3,062,917	+		AO353_13780	0.75	-1.7
3,062,918	-		AO353_13780	0.75	+1.6
3,062,918	-		AO353_13780	0.75	-1.1
3,062,918	-		AO353_13780	0.75	-2.3
3,062,918	-		AO353_13780	0.75	-0.7
3,062,918	-		AO353_13780	0.75	-1.1
3,062,949	-		AO353_13780	0.82	-1.2
3,063,050	+				+1.1
3,063,050	+				+1.7
3,063,050	+				-0.4
3,063,050	+				+2.1
3,063,051	-				-2.3
3,063,051	-				-0.8
3,063,051	-				+0.4
3,063,051	-				+0.4
3,063,051	-				+0.6
3,063,051	-				-0.7
3,063,051	-				+1.5
3,063,051	-				+1.3
3,063,051	-				-1.3
3,063,056	+				-2.3
3,063,056	+				-0.0
3,063,057	-				+0.2
3,063,057	-				+2.0
3,063,057	-				-1.4
3,063,060	+				+3.8
3,063,060	+				-0.7
3,063,060	+				+0.7
3,063,060	+				-2.2
3,063,060	+				+0.1
3,063,060	+				+1.3
3,063,060	+				+0.4
3,063,060	+				-2.4
3,063,060	+				-2.3
3,063,060	+				-1.9
3,063,060	+				-1.1
3,063,060	+				+0.2
3,063,060	+				-3.5
3,063,060	+				+1.0
3,063,060	+				+0.1
3,063,060	+				-1.4
3,063,060	+				-0.6
3,063,060	+				+1.0
3,063,060	+				-0.1
3,063,060	+				-0.3
3,063,061	-				-1.0
3,063,061	-				-0.8
3,063,061	-				-0.6
3,063,061	-				+0.7
3,063,061	-				+2.0
3,063,061	-				+0.3
3,063,061	-				-0.1
3,063,061	-				+2.0
3,063,061	-				-0.3
3,063,061	-				+0.5
3,063,061	-				-0.1
3,063,061	-				+1.7
3,063,061	-				+0.0
3,063,061	-				-0.0
3,063,061	-				-1.2
3,063,061	-				+3.7
3,063,061	-				+0.1
3,063,061	-				-1.3
3,063,061	-				+1.6
3,063,061	-				+0.1
3,063,061	-				-0.8
3,063,061	-				+1.4
3,063,064	+				+0.4
3,063,064	+				-0.1
3,063,064	+				-1.3
3,063,064	+				+3.0
3,063,064	+				+0.2
3,063,064	+				+0.6
3,063,064	+				+1.3
3,063,064	+				+0.4
3,063,064	+				-1.5
3,063,064	+				-0.4
3,063,064	+				+0.7
3,063,064	+				+2.9
3,063,064	+				+0.9
3,063,064	+				-0.7
3,063,064	+				-2.2
3,063,064	+				+1.5
3,063,064	+				+1.3
3,063,064	+				+0.2
3,063,064	+				-1.1
3,063,064	+				+0.5
3,063,064	+				-0.1
3,063,064	+				+1.7
3,063,064	+				-1.4
3,063,064	+				-0.4
3,063,064	+				-0.2
3,063,065	-				-0.6
3,063,065	-				+0.2
3,063,065	-				+0.3
3,063,065	-				+0.6
3,063,065	-				+3.1
3,063,065	-				+1.0
3,063,065	-				+2.3
3,063,065	-				-0.4
3,063,065	-				+2.3
3,063,065	-				+1.3
3,063,065	-				-0.2
3,063,065	-				+0.8
3,063,065	-				-0.6
3,063,065	-				+0.2
3,063,065	-				+0.9
3,063,065	-				+2.0
3,063,065	-				+1.2
3,063,065	-				+1.6
3,063,065	-				-0.1
3,063,067	+				+0.6
3,063,067	+				+0.1
3,063,067	+				+0.6
3,063,068	-				+1.0
3,063,068	-				+1.7
3,063,075	+				+0.1
3,063,075	+				-0.8
3,063,075	+				-0.6
3,063,075	+				+1.4
3,063,075	+				+0.5
3,063,075	+				+1.7
3,063,076	-				-0.0
3,063,076	-				-2.1
3,063,081	+				-0.9
3,063,082	-				+0.4
3,063,100	+				+0.1
3,063,100	+				+1.9
3,063,100	+				+0.7
3,063,101	-				+0.3
3,063,101	-				-1.7
3,063,101	-				-0.9
3,063,183	-				-0.5
3,063,484	+		AO353_13785	0.42	+0.9
3,063,485	-		AO353_13785	0.42	-0.2
3,063,485	-		AO353_13785	0.42	-1.6
3,063,485	-		AO353_13785	0.42	+0.9
3,063,487	+		AO353_13785	0.43	+0.3
3,063,487	+		AO353_13785	0.43	+0.4
3,063,487	+		AO353_13785	0.43	+0.6
3,063,488	-		AO353_13785	0.43	-1.9
3,063,488	-		AO353_13785	0.43	-0.3
3,063,488	-		AO353_13785	0.43	-1.2
3,063,488	-		AO353_13785	0.43	-1.9
3,063,628	+		AO353_13785	0.61	+0.3
3,063,628	+		AO353_13785	0.61	+1.1
3,063,642	+		AO353_13785	0.63	-0.6
3,063,643	-		AO353_13785	0.63	-0.1
3,063,643	-		AO353_13785	0.63	+2.0
3,063,643	-		AO353_13785	0.63	-0.4
3,063,772	+		AO353_13785	0.80	+0.3
3,063,773	-		AO353_13785	0.80	-0.8
3,063,773	-		AO353_13785	0.80	+2.7
3,063,773	-		AO353_13785	0.80	+0.1
3,063,820	+		AO353_13785	0.86	-1.2
3,063,820	+		AO353_13785	0.86	-1.6
3,063,820	+		AO353_13785	0.86	-0.4
3,063,820	+		AO353_13785	0.86	+1.5
3,063,820	+		AO353_13785	0.86	-1.8
3,063,820	+		AO353_13785	0.86	-0.4
3,063,820	+		AO353_13785	0.86	-0.0
3,063,820	+		AO353_13785	0.86	+0.3
3,063,820	+		AO353_13785	0.86	-0.5
3,063,820	+		AO353_13785	0.86	-1.4
3,063,820	+		AO353_13785	0.86	-0.7
3,063,820	+		AO353_13785	0.86	+1.6
3,063,820	+		AO353_13785	0.86	-0.6
3,063,820	+		AO353_13785	0.86	-0.1
3,063,820	+		AO353_13785	0.86	+1.9
3,063,820	+		AO353_13785	0.86	-1.0
3,063,821	-		AO353_13785	0.86	+2.2
3,063,821	-		AO353_13785	0.86	+0.3
3,063,821	-		AO353_13785	0.86	+0.7
3,063,821	-		AO353_13785	0.86	-1.2
3,063,821	-		AO353_13785	0.86	-0.6
3,063,821	-		AO353_13785	0.86	+0.5
3,063,821	-		AO353_13785	0.86	-0.3
3,063,821	-		AO353_13785	0.86	+0.6
3,063,849	+		AO353_13785	0.90	-0.6
3,063,849	+		AO353_13785	0.90	-0.6
3,063,849	+		AO353_13785	0.90	-0.7
3,063,849	+		AO353_13785	0.90	-1.1
3,063,849	+		AO353_13785	0.90	+1.6
3,063,849	+		AO353_13785	0.90	+1.1
3,063,849	+		AO353_13785	0.90	+1.2
3,063,849	+		AO353_13785	0.90	+0.9
3,063,849	+		AO353_13785	0.90	+2.3
3,063,849	+		AO353_13785	0.90	-2.2
3,063,849	+		AO353_13785	0.90	-0.2
3,063,850	-		AO353_13785	0.90	+2.9
3,063,850	-		AO353_13785	0.90	+0.6
3,063,850	-		AO353_13785	0.90	-0.7
3,063,850	-				+2.3
3,063,850	-		AO353_13785	0.90	+0.3
3,063,850	-		AO353_13785	0.90	+0.6
3,063,850	-		AO353_13785	0.90	+1.2
3,063,850	-		AO353_13785	0.90	-1.4
3,063,850	-		AO353_13785	0.90	+0.9
3,063,850	-		AO353_13785	0.90	+1.6
3,063,925	+				+0.4
3,063,925	+				-1.4
3,063,925	+				+1.7
3,063,925	+				-1.1
3,063,925	+				-0.7
3,063,925	+				-0.1
3,063,925	+				+0.7
3,063,937	+				+0.7
3,063,937	+				-1.5
3,063,937	+				-1.2
3,063,937	+				+0.7
3,063,937	+				-1.2
3,063,937	+				-0.2
3,063,937	+				+0.5
3,063,937	+				+0.7
3,063,937	+				-1.0
3,063,937	+				-2.3
3,063,937	+				-1.2
3,063,937	+				+1.3
3,063,937	+				-0.8
3,063,937	+				-1.1
3,063,937	+				-1.8
3,063,937	+				+0.7
3,063,937	+				+1.5
3,063,937	+				+2.0
3,063,937	+				+1.9
3,063,937	+				-1.3
3,063,937	+				+0.6
3,063,937	+				-0.1
3,063,938	-				+0.6
3,063,938	-				-0.1
3,063,938	-				-1.8
3,063,938	-				-1.4
3,063,938	-				+0.3
3,063,938	-				-0.0
3,063,941	+				+1.4
3,063,942	-				+1.7
3,063,942	-				-2.2
3,063,981	+				-0.1
3,064,031	+				+0.3