Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_10885

Experiment: outer cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	outer cut, LB soft agar motility assay
2,376,841	+				-0.6
2,376,841	+				-1.1
2,376,841	+				-0.5
2,376,841	+				+4.0
2,376,841	+				+0.8
2,376,841	+				-0.3
2,376,841	+				-2.2
2,376,841	+				-0.1
2,376,841	+				-1.2
2,376,841	+				-1.0
2,376,841	+				-0.8
2,376,841	+				+1.4
2,376,841	+				+1.2
2,376,841	+				-0.5
2,376,841	+				+1.0
2,376,841	+				-0.4
2,376,841	+				-0.1
2,376,841	+				+0.1
2,376,841	+				+1.2
2,376,841	+				+0.7
2,376,841	+				+0.0
2,376,841	+				+0.5
2,376,842	-				-0.7
2,376,842	-				-1.3
2,376,842	-				+0.9
2,376,842	-				-0.6
2,376,842	-				-0.3
2,376,842	-				+2.2
2,376,842	-				-0.3
2,376,842	-				+0.8
2,376,842	-				+1.2
2,376,842	-				+0.6
2,376,842	-				-0.3
2,376,842	-				-0.3
2,376,842	-				+0.2
2,376,842	-				+0.3
2,376,842	-				-0.6
2,376,842	-				-0.3
2,376,842	-				+2.9
2,376,842	-				-1.5
2,376,842	-				-0.3
2,376,842	-				-0.0
2,376,842	-				+1.4
2,376,842	-				+1.7
2,376,842	-				+0.0
2,376,842	-				-0.2
2,376,842	-				-1.3
2,376,842	-				-1.3
2,376,842	-				+1.4
2,376,845	+				-0.3
2,376,845	+				+0.0
2,376,845	+				-0.5
2,376,845	+				+2.2
2,376,845	+				+2.8
2,376,845	+				+0.2
2,376,845	+				-0.5
2,376,845	+				+0.7
2,376,845	+				+0.1
2,376,845	+				+1.7
2,376,846	-				-0.4
2,376,846	-				-0.3
2,376,846	-				+1.3
2,376,846	-				+0.0
2,376,846	-				-0.8
2,376,907	+				+3.7
2,376,907	+				-1.9
2,376,907	+				+0.1
2,376,907	+				+1.6
2,376,907	+				-1.4
2,376,908	-				+1.8
2,376,908	-				-3.1
2,376,908	-				-0.9
2,376,908	-				-2.3
2,376,908	-				-1.2
2,376,925	-				+0.6
2,376,925	-				+2.6
2,376,948	+				+0.0
2,376,948	+				-1.1
2,376,948	+				-0.8
2,376,949	-				+1.1
2,376,989	+				+0.4
2,376,990	-				+1.4
2,376,990	-				+1.9
2,376,990	-				-0.4
2,376,990	-				+0.1
2,376,990	-				+1.9
2,376,990	-				+0.3
2,376,990	-				+1.6
2,377,016	+				-1.2
2,377,017	-				-1.8
2,377,029	+				+0.6
2,377,029	+				-0.6
2,377,029	+				-0.7
2,377,029	+				+0.2
2,377,029	+				+0.2
2,377,029	+				-0.2
2,377,030	-				+1.1
2,377,030	-				+1.6
2,377,030	-				-0.3
2,377,030	-				-1.9
2,377,030	-				-0.2
2,377,030	-				+1.2
2,377,030	-				+1.9
2,377,137	+		AO353_10880	0.18	+0.4
2,377,137	+		AO353_10880	0.18	-2.1
2,377,138	-		AO353_10880	0.18	-0.2
2,377,138	-		AO353_10880	0.18	-1.2
2,377,138	-		AO353_10880	0.18	-1.7
2,377,203	+		AO353_10880	0.26	+0.5
2,377,204	-		AO353_10880	0.26	+0.5
2,377,204	-		AO353_10880	0.26	-1.0
2,377,204	-		AO353_10880	0.26	-0.7
2,377,449	+		AO353_10880	0.58	+0.4
2,377,449	+		AO353_10880	0.58	-0.7
2,377,449	+		AO353_10880	0.58	+0.5
2,377,449	+		AO353_10880	0.58	+2.4
2,377,449	+		AO353_10880	0.58	-1.0
2,377,449	+		AO353_10880	0.58	+1.0
2,377,449	+		AO353_10880	0.58	+0.7
2,377,449	+		AO353_10880	0.58	+2.8
2,377,449	+		AO353_10880	0.58	+0.1
2,377,450	-		AO353_10880	0.58	-1.8
2,377,450	-		AO353_10880	0.58	-1.4
2,377,450	-		AO353_10880	0.58	-0.8
2,377,450	-		AO353_10880	0.58	-2.7
2,377,450	-		AO353_10880	0.58	+1.2
2,377,450	-		AO353_10880	0.58	-0.7
2,377,450	-		AO353_10880	0.58	-0.3
2,377,450	-		AO353_10880	0.58	-0.2
2,377,450	-		AO353_10880	0.58	+1.7
2,377,450	-		AO353_10880	0.58	+0.9
2,377,450	-		AO353_10880	0.58	+1.4
2,377,450	-		AO353_10880	0.58	-0.8
2,377,450	-		AO353_10880	0.58	+3.2
2,377,450	-		AO353_10880	0.58	-2.2
2,377,540	-		AO353_10880	0.70	-2.0
2,377,540	-		AO353_10880	0.70	-0.6
2,377,589	+		AO353_10880	0.76	-1.6
2,377,589	+		AO353_10880	0.76	-2.1
2,377,590	-		AO353_10880	0.76	-1.0
2,377,590	-		AO353_10880	0.76	-1.2
2,377,590	-		AO353_10880	0.76	-1.5
2,377,590	-		AO353_10880	0.76	-0.3
2,377,590	-		AO353_10880	0.76	+0.4
2,377,590	-		AO353_10880	0.76	+1.6
2,377,590	-		AO353_10880	0.76	+0.0
2,377,605	+		AO353_10880	0.78	-0.0
2,377,605	+		AO353_10880	0.78	-0.1
2,377,605	+		AO353_10880	0.78	-1.4
2,377,605	+		AO353_10880	0.78	+2.3
2,377,605	+		AO353_10880	0.78	+0.0
2,377,605	+		AO353_10880	0.78	-0.4
2,377,605	+		AO353_10880	0.78	+0.9
2,377,606	-		AO353_10880	0.78	+1.2
2,377,606	-		AO353_10880	0.78	-0.5
2,377,606	-		AO353_10880	0.78	+1.2
2,377,606	-		AO353_10880	0.78	-1.1
2,377,696	+		AO353_10880	0.90	-0.1
2,377,696	+		AO353_10880	0.90	+0.2
2,377,697	-				-0.7
2,377,697	-				-0.1
2,377,697	-				+1.1
2,377,764	-				+0.4
2,377,837	+				+1.0
2,377,838	-				-2.0
2,378,011	+		AO353_10885	0.26	+0.7
2,378,011	+		AO353_10885	0.26	-2.4
2,378,012	-		AO353_10885	0.26	-0.4
2,378,024	+		AO353_10885	0.28	-1.0
2,378,024	+		AO353_10885	0.28	-0.7
2,378,024	+		AO353_10885	0.28	-1.0
2,378,024	+		AO353_10885	0.28	+0.3
2,378,025	-		AO353_10885	0.28	+0.1
2,378,025	-		AO353_10885	0.28	-1.4
2,378,054	+		AO353_10885	0.32	-0.1
2,378,054	+		AO353_10885	0.32	-2.3
2,378,054	+		AO353_10885	0.32	-0.9
2,378,055	-		AO353_10885	0.32	-0.7
2,378,055	-		AO353_10885	0.32	-1.8
2,378,055	-		AO353_10885	0.32	+0.8
2,378,055	-		AO353_10885	0.32	+2.9
2,378,055	-		AO353_10885	0.32	-1.4
2,378,055	-		AO353_10885	0.32	-0.1
2,378,199	+		AO353_10885	0.54	-0.9
2,378,199	+		AO353_10885	0.54	+1.9
2,378,250	+		AO353_10885	0.61	-2.0
2,378,251	-		AO353_10885	0.61	+0.9
2,378,307	-		AO353_10885	0.70	+0.2
2,378,307	-		AO353_10885	0.70	-3.5
2,378,332	+		AO353_10885	0.73	+1.0
2,378,604	+				-0.6
2,378,649	+		AO353_10890	0.14	-1.9
2,378,649	+		AO353_10890	0.14	-0.7
2,378,649	+		AO353_10890	0.14	-0.3
2,378,649	+		AO353_10890	0.14	+0.4
2,378,649	+		AO353_10890	0.14	-1.0
2,378,650	-		AO353_10890	0.14	+1.0
2,378,650	-		AO353_10890	0.14	-1.1
2,378,650	-		AO353_10890	0.14	-1.0
2,378,650	-		AO353_10890	0.14	-2.2
2,378,650	-		AO353_10890	0.14	+2.2
2,378,650	-		AO353_10890	0.14	+1.3
2,378,650	-		AO353_10890	0.14	-0.2
2,378,650	-		AO353_10890	0.14	+0.3
2,378,694	+		AO353_10890	0.18	-1.3
2,378,694	+		AO353_10890	0.18	-1.2
2,378,694	+		AO353_10890	0.18	-1.0
2,378,694	+		AO353_10890	0.18	+3.0
2,378,694	+		AO353_10890	0.18	+1.4
2,378,694	+		AO353_10890	0.18	-0.8
2,378,694	+		AO353_10890	0.18	-0.1
2,378,694	+		AO353_10890	0.18	+0.2
2,378,694	+		AO353_10890	0.18	-1.3
2,378,694	+		AO353_10890	0.18	-2.2
2,378,694	+		AO353_10890	0.18	+0.2
2,378,695	-		AO353_10890	0.18	+3.0
2,378,695	-		AO353_10890	0.18	+0.6
2,378,728	+		AO353_10890	0.22	-1.6
2,379,383	-		AO353_10890	0.87	+1.6
2,379,417	+				+1.0
2,379,417	+				+1.2
2,379,417	+				+0.4
2,379,417	+				+1.7
2,379,418	-				-0.7
2,379,418	-				-0.6
2,379,419	+				-0.9
2,379,419	+				-0.7
2,379,419	+				-2.3
2,379,419	+				-3.2
2,379,419	+				+0.9
2,379,419	+				+0.6
2,379,419	+				-0.1
2,379,420	-				+3.1
2,379,420	-				-1.3
2,379,420	-				-1.9
2,379,420	-				-0.3
2,379,448	+				+0.2
2,379,448	+				+0.6
2,379,449	-				+1.1
2,379,467	-				-1.1
2,379,486	+				+0.1
2,379,487	-				-0.3
2,379,493	+				+0.7