Strain Fitness in Methanococcus maripaludis S2 around MMP_RS08460

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
1,586,508	+				-3.0
1,586,569	+				-1.2
1,586,711	+				-0.2
1,586,711	+				+0.2
1,586,845	-		MMP_RS08455	0.26	+0.2
1,587,004	+		MMP_RS08455	0.59	-0.0
1,587,030	-		MMP_RS08455	0.65	+0.1
1,587,062	+		MMP_RS08455	0.71	+0.3
1,587,163	+				+0.3
1,587,203	+				+0.2
1,587,253	-				-0.1
1,587,258	+				+0.4
1,587,330	+				+0.4
1,587,330	+				-0.3
1,587,332	+				-0.0
1,587,333	-				+0.5
1,587,334	+				-0.1
1,587,336	-				+0.8
1,587,337	+				+0.3
1,587,351	+				+0.4
1,587,369	+				+0.2
1,587,376	-				+0.4
1,587,377	+				-0.3
1,587,379	+				+0.3
1,587,463	+				-0.6
1,587,465	+				-2.9
1,587,723	+		MMP_RS08460	0.18	-2.4
1,587,728	+		MMP_RS08460	0.18	-2.5
1,587,770	-		MMP_RS08460	0.22	-1.6
1,588,242	+		MMP_RS08460	0.60	+0.0
1,588,367	+		MMP_RS08460	0.71	-1.7
1,588,529	+		MMP_RS08460	0.84	-3.3
1,588,729	-				-3.0
1,589,275	-				-2.7
1,589,453	-				-1.0
1,589,456	+				-0.7
1,589,461	-				-0.7
1,589,726	+				-2.7