Strain Fitness in Methanococcus maripaludis S2 around MMP_RS08435

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
1,583,206	+				-0.7
1,583,206	+				+0.3
1,583,209	-				-0.1
1,583,209	-				-0.1
1,583,209	-				-0.6
1,583,210	+				-0.2
1,583,210	+				-0.1
1,583,217	+				+0.2
1,583,253	-				-0.3
1,583,254	+				+0.5
1,583,256	+				-0.0
1,583,263	+				-0.3
1,583,347	+		MMP_RS08430	0.17	+0.1
1,583,621	-		MMP_RS08430	0.51	-0.2
1,583,622	+		MMP_RS08430	0.51	-0.1
1,583,624	+		MMP_RS08430	0.52	+0.1
1,583,624	+		MMP_RS08430	0.52	+0.0
1,583,628	-		MMP_RS08430	0.52	+0.1
1,583,646	+		MMP_RS08430	0.54	-0.5
1,583,646	+		MMP_RS08430	0.54	+0.9
1,583,967	-				+0.1
1,583,973	-				+0.1
1,583,974	+				+0.5
1,584,034	+				-0.1
1,584,036	-				+0.6
1,584,037	+				-0.1
1,584,037	+				+0.2
1,584,055	-				-0.5
1,584,058	-				-0.3
1,584,060	-				-1.1
1,584,068	+				+0.1
1,584,310	-		MMP_RS08435	0.39	-0.4
1,584,324	-		MMP_RS08435	0.42	-1.3
1,584,422	-		MMP_RS08435	0.60	-0.8
1,584,481	+		MMP_RS08435	0.70	-0.9
1,584,593	+				-0.8
1,584,614	-				-0.8
1,584,714	-		MMP_RS08440	0.16	+0.5
1,584,715	+		MMP_RS08440	0.16	-0.0
1,584,815	-		MMP_RS08440	0.42	-0.1
1,584,816	+		MMP_RS08440	0.42	+1.0
1,584,948	+		MMP_RS08440	0.76	-0.2
1,585,063	-				-0.5
1,585,453	+		MMP_RS08445	0.45	+0.1
1,585,453	+		MMP_RS08445	0.45	-0.4
1,585,470	+		MMP_RS08445	0.47	+0.2