Strain Fitness in Methanococcus maripaludis S2 around MMP_RS07625

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
1,442,195	+				+0.2
1,442,277	+		MMP_RS07615	0.11	-0.3
1,442,278	-		MMP_RS07615	0.11	+0.1
1,442,279	+		MMP_RS07615	0.11	-0.1
1,442,279	+		MMP_RS07615	0.11	+0.1
1,442,500	-		MMP_RS07615	0.44	-0.1
1,442,609	-		MMP_RS07615	0.60	-0.0
1,442,769	+		MMP_RS07615	0.83	+0.2
1,442,779	-		MMP_RS07615	0.85	+0.4
1,442,793	+		MMP_RS07615	0.87	+0.3
1,442,816	+				-0.1
1,442,881	+				-0.0
1,442,926	-		MMP_RS07620	0.15	+0.4
1,442,948	-		MMP_RS07620	0.22	+0.3
1,442,975	-		MMP_RS07620	0.31	-0.3
1,443,087	-		MMP_RS07620	0.69	+0.0
1,443,091	+		MMP_RS07620	0.70	+0.2
1,443,127	+		MMP_RS07620	0.82	+0.3
1,443,227	+				-0.2
1,443,426	-		MMP_RS07625	0.30	-0.5
1,443,467	+		MMP_RS07625	0.36	-1.5
1,443,585	-		MMP_RS07625	0.51	-0.5
1,443,610	-		MMP_RS07625	0.54	-1.2
1,443,618	-		MMP_RS07625	0.55	-2.4
1,443,676	+		MMP_RS07625	0.63	+0.3
1,443,900	-				-0.3
1,443,900	-				-0.1
1,443,900	-				-0.5
1,443,936	+				-0.2
1,443,947	+				-0.5
1,443,992	-				-1.0
1,443,998	-				-0.6
1,444,006	-				-1.5
1,444,006	-				-0.7
1,444,007	+				-0.7
1,444,254	+		MMP_RS07630	0.27	-2.2
1,444,280	-		MMP_RS07630	0.30	-1.7
1,444,740	+		MMP_RS07630	0.85	-0.8
1,444,810	-				-1.1
1,444,816	+				-1.5
1,444,910	+				-2.8