Strain Fitness in Methanococcus maripaludis S2 around MMP_RS06625

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
1,268,415	+		MMP_RS06610	0.48	+0.7
1,268,498	-		MMP_RS06610	0.58	+0.4
1,268,568	+		MMP_RS06610	0.67	+0.0
1,268,661	+		MMP_RS06610	0.78	-0.1
1,268,879	-				+0.2
1,268,890	+				-0.0
1,268,896	+				+0.2
1,268,897	-				+0.2
1,268,897	-				+0.9
1,268,898	+				-0.2
1,268,899	-				+0.1
1,268,899	-				+0.3
1,268,900	+				+1.0
1,269,245	+				+0.1
1,269,248	-				-0.2
1,269,248	-				+0.0
1,269,249	+				+0.3
1,269,249	+				+0.2
1,269,250	-				+0.3
1,269,251	+				-0.3
1,269,253	+				-0.2
1,269,269	+				-0.3
1,269,273	+				-4.2
1,269,273	+				-2.2
1,269,277	+				-1.7
1,269,292	+				-0.9
1,269,378	+				-1.7
1,269,602	+		MMP_RS06625	0.19	-1.4
1,269,760	+		MMP_RS06625	0.31	-1.2
1,270,408	-		MMP_RS06625	0.80	-1.8
1,270,409	+		MMP_RS06625	0.80	-1.7
1,270,817	+		MMP_RS06630	0.40	-0.5
1,270,873	-		MMP_RS06630	0.60	-0.8
1,271,352	-				-2.1
1,271,381	-				-2.1
1,271,392	-				-1.0
1,271,508	-				-0.9
1,271,650	-				-1.8