Strain Fitness in Methanococcus maripaludis S2 around MMP_RS05930

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
1,136,865	-				-1.4
1,137,017	+				+0.1
1,137,024	-				-0.5
1,137,026	-				-2.4
1,137,027	+				-1.3
1,137,029	+				-1.1
1,137,029	+				-0.9
1,137,029	+				-1.9
1,137,082	-				-2.0
1,137,084	-				+0.0
1,137,084	-				-0.1
1,137,084	-				+0.1
1,137,085	+				+0.9
1,137,085	+				+0.6
1,137,085	+				+0.2
1,137,085	+				+0.9
1,137,106	-				+0.3
1,137,117	-				-0.0
1,137,145	+				-0.2
1,137,149	+				-0.2
1,137,149	+				+0.4
1,137,338	-		MMP_RS05920	0.86	-1.1
1,137,387	-				-1.3
1,137,392	-				-0.1
1,137,399	-				-2.0
1,137,445	-				+0.4
1,137,456	+				-0.6
1,137,460	-				+0.0
1,137,460	-				+0.5
1,137,476	+		MMP_RS05925	0.16	+0.2
1,137,554	-		MMP_RS05925	0.51	-0.2
1,137,554	-		MMP_RS05925	0.51	+0.3
1,137,562	-		MMP_RS05925	0.55	-0.9
1,137,593	+		MMP_RS05925	0.69	-0.0
1,137,624	-		MMP_RS05925	0.83	-1.2
1,137,660	-				-0.4
1,137,678	-				+0.3
1,137,732	+				+1.7
1,137,734	+				+0.6
1,137,748	+				-0.0
1,137,748	+				+1.1
1,137,776	+				-1.3
1,137,777	-				-0.0
1,137,903	+				-0.2
1,137,942	+		MMP_RS05930	0.12	+0.0
1,138,030	-		MMP_RS05930	0.19	-1.1
1,138,061	-		MMP_RS05930	0.21	-0.9
1,138,400	-		MMP_RS05930	0.48	-0.3
1,138,498	+		MMP_RS05930	0.55	-0.5
1,139,111	-				+0.5
1,139,321	+		MMP_RS05935	0.17	-0.3
1,139,335	-		MMP_RS05935	0.18	+0.2
1,139,336	+		MMP_RS05935	0.18	+0.6
1,139,354	+		MMP_RS05935	0.20	-0.4
1,139,496	-		MMP_RS05935	0.33	-0.3
1,139,499	-		MMP_RS05935	0.34	-1.0
1,139,500	+		MMP_RS05935	0.34	+0.4
1,139,540	-		MMP_RS05935	0.37	-0.0
1,139,575	-		MMP_RS05935	0.41	+0.1
1,139,690	+		MMP_RS05935	0.52	+0.2
1,139,703	-		MMP_RS05935	0.53	-0.2
1,139,705	-		MMP_RS05935	0.53	+0.1
1,139,705	-		MMP_RS05935	0.53	+0.7
1,139,706	+		MMP_RS05935	0.53	+0.1
1,139,706	+		MMP_RS05935	0.53	+0.1
1,139,706	+		MMP_RS05935	0.53	+0.1
1,139,709	-		MMP_RS05935	0.53	+0.4
1,139,828	-		MMP_RS05935	0.65	+0.3
1,139,832	+		MMP_RS05935	0.65	-0.0
1,139,834	+		MMP_RS05935	0.65	+0.4
1,139,937	+		MMP_RS05935	0.75	-0.0
1,139,970	+		MMP_RS05935	0.78	-0.2
1,139,970	+		MMP_RS05935	0.78	+0.1
1,139,983	+		MMP_RS05935	0.79	-0.1
1,139,986	-		MMP_RS05935	0.80	-0.0