Strain Fitness in Methanococcus maripaludis S2 around MMP_RS03315

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
622,838	+				-2.6
623,036	-				-2.6
623,247	-				-2.0
623,421	-				-0.1
623,462	-				-0.1
623,473	+				-0.3
623,497	+				-0.4
623,504	+				+0.0
623,517	-				+0.2
623,693	-		MMP_RS03315	0.78	-2.8
623,702	-		MMP_RS03315	0.82	-2.7
623,704	-		MMP_RS03315	0.83	-3.4
623,755	-				-0.9
623,755	-				-1.9
623,756	+				-2.7
623,822	-				-0.1
623,823	+				-4.2
623,823	+				-2.1
623,824	-				-1.7
623,826	-				+0.1
623,826	-				+0.1
623,826	-				+0.7
623,826	-				-0.5
623,826	-				-0.4
623,826	-				+0.1
623,827	+				-0.4
623,828	-				+0.1
623,828	-				-0.4
623,828	-				-0.0
623,887	-				+0.1
623,897	-		MMP_RS03320	0.12	-0.0
623,901	+		MMP_RS03320	0.13	-0.1
623,909	-		MMP_RS03320	0.15	+0.9
624,012	-		MMP_RS03320	0.40	-0.1
624,023	-		MMP_RS03320	0.43	-0.0
624,287	-				-0.5
624,288	+				-0.1
624,318	+				+0.0
624,365	-				-0.3
624,365	-				+0.2
624,365	-				-0.3
624,365	-				-0.2
624,366	+				-0.2
624,367	-				-0.7
624,368	+				+0.1
624,376	-				+0.1
624,377	+				+0.0
624,377	+				+0.2
624,377	+				+0.2
624,381	+				+0.3
624,400	-				-0.4
624,401	+				-0.3
624,401	+				-0.2
624,411	-				-0.3
624,414	-				+0.1
624,415	+				-0.1
624,434	-				+0.6
624,462	+				-0.5
624,535	-				+0.1
624,593	+		MMP_RS03325	0.14	+0.2
624,593	+		MMP_RS03325	0.14	+0.2