Strain Fitness in Methanococcus maripaludis S2 around MMP_RS01250

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
236,434	+				+0.1
236,493	-				-0.8
236,602	-				-1.9
236,703	+				-1.9
236,717	-				+0.2
236,730	+				-0.6
236,732	+				-1.5
236,747	+				-0.0
236,747	+				-3.5
236,752	+				+0.6
236,752	+				+0.5
236,756	+				+1.7
236,756	+				+0.4
236,764	-				-0.0
236,764	-				+1.5
236,766	-				+0.4
236,766	-				+0.5
236,766	-				+0.5
236,766	-				+0.3
236,767	+				+0.7
236,767	+				+0.3
236,768	-				+0.5
236,768	-				+0.3
236,769	+				-0.1
236,769	+				+0.7
236,805	+				-0.3
236,809	+				-0.3
236,860	+				-0.8
236,863	-				-1.0
236,920	-				-1.3
237,222	-		MMP_RS01250	0.33	-1.0
237,343	+		MMP_RS01250	0.44	-1.1
237,572	-		MMP_RS01250	0.64	-0.4
237,605	+		MMP_RS01250	0.67	-0.6
237,872	+				-1.0
237,877	-				-0.9
237,983	+				+0.8
237,989	-				+0.2
237,993	-				-0.6
237,994	+				-0.3
237,994	+				+0.2
238,009	+				+0.6
238,066	-				+0.0
238,067	+				+1.2
238,205	-		MMP_RS01255	0.27	+0.0
238,215	+		MMP_RS01255	0.28	+0.1
238,262	-		MMP_RS01255	0.35	-0.2
238,450	-		MMP_RS01255	0.61	-0.3
238,646	-		MMP_RS01255	0.87	+0.3