Strain Fitness in Methanococcus maripaludis S2 around MMP_RS00475

Experiment: Formate McCas no stress control 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate McCas no stress control 1
93,954	+				-0.8
93,973	+				-0.9
93,973	+				-0.9
94,078	-				-0.1
94,080	-				-0.7
94,130	-		MMP_RS00475	0.14	+0.1
94,131	+		MMP_RS00475	0.14	+1.1
94,134	+		MMP_RS00475	0.14	-0.2
94,218	-		MMP_RS00475	0.22	-0.9
94,219	+		MMP_RS00475	0.22	-0.3
94,413	+		MMP_RS00475	0.40	-0.5
94,485	-		MMP_RS00475	0.46	-1.0
94,720	-		MMP_RS00475	0.68	-0.5
94,824	-		MMP_RS00475	0.78	-1.1
94,824	-		MMP_RS00475	0.78	+0.2
94,824	-		MMP_RS00475	0.78	-0.8
94,825	+		MMP_RS00475	0.78	-1.1
94,877	-		MMP_RS00475	0.83	-0.9
94,877	-		MMP_RS00475	0.83	-0.2
94,928	+		MMP_RS00475	0.87	-0.7
95,071	-				+0.1
95,071	-				+0.1
95,101	-				-0.0
95,179	-				-0.3
95,227	+				+0.3
95,272	+				-0.5
95,281	+				+0.8
95,315	-				+0.2
95,315	-				-0.3
95,315	-				-0.6
95,348	-				-0.2
95,373	-				+0.2
95,445	-				-0.1
95,452	+		MMP_RS00480	0.10	-0.6
95,466	-		MMP_RS00480	0.12	-0.1
95,475	-		MMP_RS00480	0.13	+0.0
95,475	-		MMP_RS00480	0.13	+0.7
95,513	-		MMP_RS00480	0.19	+0.4
95,513	-		MMP_RS00480	0.19	-0.3
95,514	+		MMP_RS00480	0.19	-0.5
95,563	-		MMP_RS00480	0.26	+0.1
95,804	-		MMP_RS00480	0.61	+0.1
95,856	+		MMP_RS00480	0.68	-0.1
95,970	+		MMP_RS00480	0.84	-0.0
96,002	-		MMP_RS00480	0.89	-0.5
96,009	-		MMP_RS00480	0.90	+0.1
96,009	-		MMP_RS00480	0.90	+0.1
96,055	-				+0.3
96,055	-				+0.7
96,055	-				-0.1
96,056	+				+0.5
96,058	-				-0.0
96,058	-				+0.7
96,058	-				-0.1
96,058	-				+0.1
96,060	-				+0.3