Experiment: D-Gluconic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26610 and BWI76_RS26615 are separated by 209 nucleotides BWI76_RS26615 and BWI76_RS26620 are separated by 331 nucleotides BWI76_RS26620 and BWI76_RS26625 are separated by 58 nucleotides
BWI76_RS26610: BWI76_RS26610 - oligopeptidase A, at 5,507,801 to 5,509,843
_RS26610
BWI76_RS26615: BWI76_RS26615 - gluconate:H+ symporter (from data) , at 5,510,053 to 5,511,369
_RS26615
BWI76_RS26620: BWI76_RS26620 - Fe-S biogenesis protein NfuA, at 5,511,701 to 5,512,276
_RS26620
BWI76_RS26625: BWI76_RS26625 - gluconate transporter periplasmic gluconate-binding protein, at 5,512,335 to 5,513,009
_RS26625
Position (kb)
5510
5511
5512 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 5509.142 kb on - strand, within BWI76_RS26610 at 5509.153 kb on + strand, within BWI76_RS26610 at 5509.311 kb on + strand, within BWI76_RS26610 at 5509.351 kb on - strand, within BWI76_RS26610 at 5509.412 kb on - strand, within BWI76_RS26610 at 5509.473 kb on + strand, within BWI76_RS26610 at 5509.473 kb on + strand, within BWI76_RS26610 at 5509.473 kb on + strand, within BWI76_RS26610 at 5509.478 kb on - strand, within BWI76_RS26610 at 5509.480 kb on + strand, within BWI76_RS26610 at 5509.483 kb on - strand, within BWI76_RS26610 at 5509.492 kb on - strand, within BWI76_RS26610 at 5509.515 kb on - strand, within BWI76_RS26610 at 5509.538 kb on - strand, within BWI76_RS26610 at 5509.708 kb on - strand at 5509.773 kb on + strand at 5509.854 kb on + strand at 5510.041 kb on - strand at 5510.082 kb on + strand at 5510.127 kb on + strand at 5510.368 kb on + strand, within BWI76_RS26615 at 5510.438 kb on - strand, within BWI76_RS26615 at 5510.629 kb on + strand, within BWI76_RS26615 at 5510.667 kb on + strand, within BWI76_RS26615 at 5510.687 kb on + strand, within BWI76_RS26615 at 5510.844 kb on + strand, within BWI76_RS26615 at 5510.848 kb on + strand, within BWI76_RS26615 at 5510.922 kb on - strand, within BWI76_RS26615 at 5511.026 kb on + strand, within BWI76_RS26615 at 5511.031 kb on + strand, within BWI76_RS26615 at 5511.253 kb on - strand at 5511.370 kb on + strand at 5511.658 kb on - strand at 5511.659 kb on + strand at 5511.664 kb on - strand at 5512.114 kb on - strand, within BWI76_RS26620 at 5512.362 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Gluconic Acid (C) remove 5,509,142 - BWI76_RS26610 0.66 +0.8 5,509,153 + BWI76_RS26610 0.66 -0.3 5,509,311 + BWI76_RS26610 0.74 -0.5 5,509,351 - BWI76_RS26610 0.76 -1.0 5,509,412 - BWI76_RS26610 0.79 +0.8 5,509,473 + BWI76_RS26610 0.82 -0.5 5,509,473 + BWI76_RS26610 0.82 +0.3 5,509,473 + BWI76_RS26610 0.82 -0.3 5,509,478 - BWI76_RS26610 0.82 -0.4 5,509,480 + BWI76_RS26610 0.82 -0.0 5,509,483 - BWI76_RS26610 0.82 +1.0 5,509,492 - BWI76_RS26610 0.83 -0.7 5,509,515 - BWI76_RS26610 0.84 -0.2 5,509,538 - BWI76_RS26610 0.85 -0.0 5,509,708 - -1.2 5,509,773 + +0.0 5,509,854 + +0.4 5,510,041 - +1.3 5,510,082 + -2.3 5,510,127 + -0.8 5,510,368 + BWI76_RS26615 0.24 -0.4 5,510,438 - BWI76_RS26615 0.29 -2.3 5,510,629 + BWI76_RS26615 0.44 -1.3 5,510,667 + BWI76_RS26615 0.47 -2.6 5,510,687 + BWI76_RS26615 0.48 -1.7 5,510,844 + BWI76_RS26615 0.60 -3.2 5,510,848 + BWI76_RS26615 0.60 -0.1 5,510,922 - BWI76_RS26615 0.66 -1.4 5,511,026 + BWI76_RS26615 0.74 -3.0 5,511,031 + BWI76_RS26615 0.74 -2.8 5,511,253 - -2.1 5,511,370 + -1.7 5,511,658 - +1.6 5,511,659 + -1.0 5,511,664 - +0.1 5,512,114 - BWI76_RS26620 0.72 +0.1 5,512,362 - -0.2
Or see this region's nucleotide sequence