Experiment: D-Gluconic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS14185 and BWI76_RS14190 overlap by 4 nucleotides BWI76_RS14190 and BWI76_RS14195 are separated by 128 nucleotides BWI76_RS14195 and BWI76_RS14200 overlap by 4 nucleotides
BWI76_RS14185: BWI76_RS14185 - 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase, at 2,969,036 to 2,969,749
_RS14185
BWI76_RS14190: BWI76_RS14190 - DNA-binding protein, at 2,969,746 to 2,970,486
_RS14190
BWI76_RS14195: BWI76_RS14195 - LysR family transcriptional regulator, at 2,970,615 to 2,971,838
_RS14195
BWI76_RS14200: BWI76_RS14200 - protocatechuate 4,5-dioxygenase, at 2,971,835 to 2,973,097
_RS14200
Position (kb)
2970
2971
2972 Strain fitness (log2 ratio)
-2
-1
0
1 at 2969.670 kb on + strand, within BWI76_RS14185 at 2969.712 kb on - strand at 2969.992 kb on - strand, within BWI76_RS14190 at 2970.301 kb on - strand, within BWI76_RS14190 at 2970.346 kb on + strand, within BWI76_RS14190 at 2970.382 kb on + strand, within BWI76_RS14190 at 2970.393 kb on + strand, within BWI76_RS14190 at 2970.395 kb on - strand, within BWI76_RS14190 at 2970.395 kb on - strand, within BWI76_RS14190 at 2970.399 kb on + strand, within BWI76_RS14190 at 2970.402 kb on - strand, within BWI76_RS14190 at 2970.402 kb on - strand, within BWI76_RS14190 at 2970.402 kb on - strand, within BWI76_RS14190 at 2970.407 kb on - strand, within BWI76_RS14190 at 2970.438 kb on + strand at 2970.446 kb on - strand at 2970.448 kb on + strand at 2970.477 kb on + strand at 2970.480 kb on - strand at 2970.484 kb on + strand at 2970.484 kb on + strand at 2970.492 kb on - strand at 2970.492 kb on - strand at 2970.495 kb on + strand at 2970.495 kb on + strand at 2970.503 kb on - strand at 2970.518 kb on + strand at 2970.518 kb on + strand at 2970.518 kb on + strand at 2970.518 kb on + strand at 2970.518 kb on + strand at 2970.526 kb on - strand at 2970.526 kb on - strand at 2970.526 kb on - strand at 2970.526 kb on - strand at 2970.538 kb on + strand at 2970.678 kb on + strand at 2970.678 kb on + strand at 2970.685 kb on - strand at 2970.686 kb on + strand at 2970.686 kb on - strand at 2970.687 kb on - strand at 2970.696 kb on - strand at 2970.756 kb on + strand, within BWI76_RS14195 at 2970.807 kb on - strand, within BWI76_RS14195 at 2970.808 kb on + strand, within BWI76_RS14195 at 2970.816 kb on + strand, within BWI76_RS14195 at 2970.829 kb on - strand, within BWI76_RS14195 at 2970.835 kb on - strand, within BWI76_RS14195 at 2970.877 kb on - strand, within BWI76_RS14195 at 2970.882 kb on - strand, within BWI76_RS14195 at 2970.892 kb on + strand, within BWI76_RS14195 at 2970.906 kb on + strand, within BWI76_RS14195 at 2970.923 kb on + strand, within BWI76_RS14195 at 2970.931 kb on - strand, within BWI76_RS14195 at 2970.988 kb on + strand, within BWI76_RS14195 at 2971.011 kb on - strand, within BWI76_RS14195 at 2971.016 kb on - strand, within BWI76_RS14195 at 2971.018 kb on + strand, within BWI76_RS14195 at 2971.026 kb on - strand, within BWI76_RS14195 at 2971.047 kb on - strand, within BWI76_RS14195 at 2971.216 kb on - strand, within BWI76_RS14195 at 2971.391 kb on + strand, within BWI76_RS14195 at 2971.480 kb on + strand, within BWI76_RS14195 at 2971.571 kb on - strand, within BWI76_RS14195 at 2971.627 kb on + strand, within BWI76_RS14195 at 2972.042 kb on + strand, within BWI76_RS14200 at 2972.572 kb on - strand, within BWI76_RS14200 at 2972.596 kb on + strand, within BWI76_RS14200 at 2972.635 kb on - strand, within BWI76_RS14200
Per-strain Table
Position Strand Gene LocusTag Fraction D-Gluconic Acid (C) remove 2,969,670 + BWI76_RS14185 0.89 +0.0 2,969,712 - +0.3 2,969,992 - BWI76_RS14190 0.33 +1.3 2,970,301 - BWI76_RS14190 0.75 -0.3 2,970,346 + BWI76_RS14190 0.81 -0.4 2,970,382 + BWI76_RS14190 0.86 -1.4 2,970,393 + BWI76_RS14190 0.87 +0.2 2,970,395 - BWI76_RS14190 0.88 +0.8 2,970,395 - BWI76_RS14190 0.88 +1.5 2,970,399 + BWI76_RS14190 0.88 +1.5 2,970,402 - BWI76_RS14190 0.89 -0.5 2,970,402 - BWI76_RS14190 0.89 +0.6 2,970,402 - BWI76_RS14190 0.89 +0.6 2,970,407 - BWI76_RS14190 0.89 +0.5 2,970,438 + -0.1 2,970,446 - -0.9 2,970,448 + +0.2 2,970,477 + +0.5 2,970,480 - -0.1 2,970,484 + -1.7 2,970,484 + -0.7 2,970,492 - -0.5 2,970,492 - +0.5 2,970,495 + +0.4 2,970,495 + +0.1 2,970,503 - +0.4 2,970,518 + +0.8 2,970,518 + -1.5 2,970,518 + +0.3 2,970,518 + -0.7 2,970,518 + +0.7 2,970,526 - -0.2 2,970,526 - -0.1 2,970,526 - -0.3 2,970,526 - -0.0 2,970,538 + -0.5 2,970,678 + +1.5 2,970,678 + -1.6 2,970,685 - +1.0 2,970,686 + -0.1 2,970,686 - +1.1 2,970,687 - -1.4 2,970,696 - +0.9 2,970,756 + BWI76_RS14195 0.12 -0.1 2,970,807 - BWI76_RS14195 0.16 +0.5 2,970,808 + BWI76_RS14195 0.16 -0.8 2,970,816 + BWI76_RS14195 0.16 -0.7 2,970,829 - BWI76_RS14195 0.17 +1.1 2,970,835 - BWI76_RS14195 0.18 +1.0 2,970,877 - BWI76_RS14195 0.21 -0.6 2,970,882 - BWI76_RS14195 0.22 -0.5 2,970,892 + BWI76_RS14195 0.23 +0.2 2,970,906 + BWI76_RS14195 0.24 -2.3 2,970,923 + BWI76_RS14195 0.25 +0.3 2,970,931 - BWI76_RS14195 0.26 -0.9 2,970,988 + BWI76_RS14195 0.30 +0.0 2,971,011 - BWI76_RS14195 0.32 +0.1 2,971,016 - BWI76_RS14195 0.33 -0.9 2,971,018 + BWI76_RS14195 0.33 +0.7 2,971,026 - BWI76_RS14195 0.34 -0.4 2,971,047 - BWI76_RS14195 0.35 +0.6 2,971,216 - BWI76_RS14195 0.49 -0.1 2,971,391 + BWI76_RS14195 0.63 +0.4 2,971,480 + BWI76_RS14195 0.71 -0.8 2,971,571 - BWI76_RS14195 0.78 -0.1 2,971,627 + BWI76_RS14195 0.83 +0.4 2,972,042 + BWI76_RS14200 0.16 -0.4 2,972,572 - BWI76_RS14200 0.58 -0.3 2,972,596 + BWI76_RS14200 0.60 -0.2 2,972,635 - BWI76_RS14200 0.63 -0.9
Or see this region's nucleotide sequence