Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_18775

Experiment: Urea (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Urea (N)
4,128,109	-		AO353_18770	0.60	+0.6
4,128,153	+		AO353_18770	0.62	+1.1
4,128,192	+		AO353_18770	0.64	+0.1
4,128,193	-		AO353_18770	0.64	+0.3
4,128,312	-		AO353_18770	0.70	+1.8
4,128,345	+		AO353_18770	0.71	+0.2
4,128,345	+		AO353_18770	0.71	-0.4
4,128,346	-		AO353_18770	0.71	+0.3
4,128,346	-		AO353_18770	0.71	+1.2
4,128,346	-		AO353_18770	0.71	+0.5
4,128,408	-		AO353_18770	0.74	+0.2
4,128,475	+		AO353_18770	0.77	-0.4
4,128,476	-		AO353_18770	0.77	-1.7
4,128,476	-		AO353_18770	0.77	+0.3
4,128,476	-		AO353_18770	0.77	+1.3
4,128,567	-		AO353_18770	0.82	+1.9
4,128,567	-		AO353_18770	0.82	+0.1
4,128,628	+		AO353_18770	0.84	-0.8
4,128,628	+		AO353_18770	0.84	-0.9
4,128,628	+		AO353_18770	0.84	-1.9
4,128,628	+		AO353_18770	0.84	+0.4
4,128,629	-		AO353_18770	0.84	+1.2
4,128,629	-		AO353_18770	0.84	+1.0
4,128,629	-		AO353_18770	0.84	+0.8
4,128,683	-		AO353_18770	0.87	-1.1
4,128,683	-		AO353_18770	0.87	+0.1
4,128,693	-		AO353_18770	0.87	+0.6
4,128,826	+				-1.0
4,128,827	-				+0.4
4,128,898	-				-1.1
4,128,943	+				-0.6
4,128,962	+				-1.7
4,128,963	-				-0.7
4,128,970	+				+0.3
4,128,970	+				+0.1
4,128,971	-				-0.0
4,128,971	-				-0.2
4,128,979	+				-1.0
4,128,979	+				-1.0
4,128,979	+				-0.6
4,128,979	+				-0.5
4,128,980	-				-1.8
4,128,980	-				+0.4
4,128,980	-				+0.3
4,129,001	-				-1.8
4,129,106	+		AO353_18775	0.10	+0.0
4,129,106	+		AO353_18775	0.10	-0.7
4,129,411	-		AO353_18775	0.33	-1.0
4,129,675	+		AO353_18775	0.53	-0.8
4,129,676	-		AO353_18775	0.53	-1.7
4,129,709	+		AO353_18775	0.55	-1.5
4,129,709	+		AO353_18775	0.55	-0.1
4,129,710	-		AO353_18775	0.55	+1.2
4,129,710	-		AO353_18775	0.55	-0.8
4,129,721	+		AO353_18775	0.56	+0.2
4,129,802	-		AO353_18775	0.62	-0.3
4,129,802	-		AO353_18775	0.62	-1.5
4,129,976	+		AO353_18775	0.75	-0.8
4,129,977	-		AO353_18775	0.76	-2.0
4,129,977	-		AO353_18775	0.76	-0.2
4,129,993	+		AO353_18775	0.77	-1.8
4,129,993	+		AO353_18775	0.77	-1.2
4,130,024	+		AO353_18775	0.79	-2.4
4,130,033	+		AO353_18775	0.80	+0.4
4,130,033	+		AO353_18775	0.80	+0.4
4,130,033	+		AO353_18775	0.80	-1.5
4,130,033	+		AO353_18775	0.80	-1.2
4,130,033	+		AO353_18775	0.80	-1.9
4,130,033	+		AO353_18775	0.80	-0.8
4,130,033	+		AO353_18775	0.80	-2.9
4,130,034	-		AO353_18775	0.80	-2.1
4,130,034	-		AO353_18775	0.80	-2.0
4,130,034	-		AO353_18775	0.80	-1.4
4,130,068	+		AO353_18775	0.82	-3.7
4,130,069	-		AO353_18775	0.82	-2.5
4,130,127	+		AO353_18775	0.87	-2.9
4,130,127	+		AO353_18775	0.87	-0.2
4,130,138	+		AO353_18775	0.88	-3.0
4,130,139	-		AO353_18775	0.88	-1.5
4,130,139	-		AO353_18775	0.88	-0.2
4,130,172	+				-2.4
4,130,172	+				-1.5
4,130,172	+				-0.1
4,130,172	+				+0.2
4,130,173	-				-1.4
4,130,173	-				+0.4
4,130,178	+				-1.2
4,130,257	+				-0.5
4,130,257	+				-0.9
4,130,257	+				+0.5
4,130,257	+				-1.5
4,130,257	+				-3.0
4,130,257	+				-2.4
4,130,257	+				-2.2
4,130,258	-				+0.4
4,130,258	-				-0.5
4,130,258	-				-1.4
4,130,274	-				-0.7
4,130,305	+				-1.3
4,130,305	+				-0.1
4,130,305	+				-2.3
4,130,305	+				-0.7
4,130,305	+				-0.8
4,130,305	+				-2.8
4,130,306	-				-0.4
4,130,308	+				-2.8
4,130,308	+				-1.4
4,130,309	-				-2.2
4,130,309	-				-0.9
4,130,309	-				-1.0
4,130,315	+				-2.0
4,130,316	-				-1.5
4,130,323	+				-0.8
4,130,323	+				-1.1
4,130,324	-				+1.2
4,130,324	-				-2.5
4,130,324	-				-1.4
4,130,327	+				+0.1
4,130,327	+				-1.2
4,130,327	+				-1.9
4,130,327	+				-2.2
4,130,327	+				-1.2
4,130,327	+				+0.5
4,130,328	-				-0.8
4,130,380	+				-0.9
4,130,380	+				+1.0
4,130,380	+				-0.1
4,130,380	+				-0.9
4,130,380	+				-0.8
4,130,380	+				-1.9
4,130,380	+				+1.8
4,130,381	-				-1.0
4,130,381	-				+0.2
4,130,381	-				-1.4
4,130,391	+				-0.5
4,130,405	+				-0.4
4,130,436	+				-0.3
4,130,483	-				-0.5
4,130,483	-				-3.1
4,130,599	+		AO353_18780	0.22	+0.8
4,130,600	-		AO353_18780	0.22	-1.9
4,130,600	-		AO353_18780	0.22	-2.2
4,130,643	+		AO353_18780	0.27	-0.9
4,130,644	-		AO353_18780	0.27	-0.3
4,130,644	-		AO353_18780	0.27	+0.2
4,130,644	-		AO353_18780	0.27	+0.3
4,130,644	-		AO353_18780	0.27	-0.5
4,130,644	-		AO353_18780	0.27	-0.3
4,130,644	-		AO353_18780	0.27	-1.5
4,130,644	-		AO353_18780	0.27	+0.4
4,130,644	-		AO353_18780	0.27	-0.9
4,130,644	-		AO353_18780	0.27	-1.1
4,130,646	+		AO353_18780	0.28	+0.2
4,130,646	+		AO353_18780	0.28	+0.3
4,130,647	-		AO353_18780	0.28	-2.5
4,130,775	+		AO353_18780	0.43	+0.1
4,130,776	-		AO353_18780	0.43	-1.1
4,130,776	-		AO353_18780	0.43	-0.3
4,130,776	-		AO353_18780	0.43	-1.4
4,130,776	-		AO353_18780	0.43	-1.0
4,130,801	-		AO353_18780	0.46	-0.3
4,130,844	+		AO353_18780	0.51	-0.7
4,130,844	+		AO353_18780	0.51	-0.2
4,130,844	+		AO353_18780	0.51	+0.1
4,130,844	+		AO353_18780	0.51	-1.5
4,130,844	+		AO353_18780	0.51	-0.0
4,130,844	+		AO353_18780	0.51	-0.7
4,130,845	-		AO353_18780	0.52	-1.0
4,130,845	-		AO353_18780	0.52	+2.1
4,130,845	-		AO353_18780	0.52	+0.2
4,130,845	-		AO353_18780	0.52	-0.9
4,130,888	+		AO353_18780	0.57	-1.1
4,131,035	+		AO353_18780	0.74	-0.7
4,131,098	+		AO353_18780	0.82	-1.5
4,131,099	-		AO353_18780	0.82	-1.0
4,131,099	-		AO353_18780	0.82	-1.4
4,131,243	+				-1.0
4,131,243	+				-0.1
4,131,243	+				+0.7
4,131,243	+				+0.4
4,131,244	-				-0.3
4,131,244	-				-0.3
4,131,244	-				+0.7
4,131,244	-				-0.5
4,131,259	+				-0.1
4,131,259	+				-2.1
4,131,269	-				+0.5
4,131,269	-				-0.4
4,131,295	+				-0.3
4,131,296	-				-0.9