Experiment: molybdate 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_918 and Pf6N2E2_919 are separated by 384 nucleotides
Pf6N2E2_918 - FIG00956406: hypothetical protein, at 1,079,709 to 1,080,386
_918
Pf6N2E2_919 - FIG00954373: hypothetical protein, at 1,080,771 to 1,081,025
_919
Position (kb)
1080
1081
1082 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1079.774 kb on + strand at 1079.774 kb on + strand at 1079.774 kb on + strand at 1079.774 kb on + strand at 1079.774 kb on + strand at 1079.775 kb on - strand at 1079.775 kb on - strand at 1079.777 kb on - strand, within Pf6N2E2_918 at 1079.777 kb on - strand, within Pf6N2E2_918 at 1079.777 kb on - strand, within Pf6N2E2_918 at 1079.956 kb on - strand, within Pf6N2E2_918 at 1079.956 kb on - strand, within Pf6N2E2_918 at 1079.959 kb on + strand, within Pf6N2E2_918 at 1079.959 kb on + strand, within Pf6N2E2_918 at 1079.959 kb on + strand, within Pf6N2E2_918 at 1079.959 kb on + strand, within Pf6N2E2_918 at 1079.959 kb on + strand, within Pf6N2E2_918 at 1079.959 kb on + strand, within Pf6N2E2_918 at 1079.960 kb on - strand, within Pf6N2E2_918 at 1079.960 kb on - strand, within Pf6N2E2_918 at 1079.960 kb on - strand, within Pf6N2E2_918 at 1079.960 kb on - strand, within Pf6N2E2_918 at 1079.960 kb on - strand, within Pf6N2E2_918 at 1079.960 kb on - strand, within Pf6N2E2_918 at 1080.042 kb on + strand, within Pf6N2E2_918 at 1080.065 kb on - strand, within Pf6N2E2_918 at 1080.190 kb on + strand, within Pf6N2E2_918 at 1080.190 kb on + strand, within Pf6N2E2_918 at 1080.190 kb on + strand, within Pf6N2E2_918 at 1080.191 kb on - strand, within Pf6N2E2_918 at 1080.193 kb on + strand, within Pf6N2E2_918 at 1080.194 kb on - strand, within Pf6N2E2_918 at 1080.194 kb on - strand, within Pf6N2E2_918 at 1080.419 kb on - strand at 1080.419 kb on - strand at 1080.683 kb on + strand at 1080.816 kb on + strand, within Pf6N2E2_919 at 1080.907 kb on + strand, within Pf6N2E2_919 at 1080.907 kb on + strand, within Pf6N2E2_919 at 1081.012 kb on + strand at 1081.073 kb on + strand at 1081.089 kb on + strand at 1081.194 kb on + strand at 1081.317 kb on + strand at 1081.318 kb on - strand at 1081.481 kb on + strand at 1081.482 kb on - strand at 1081.494 kb on + strand at 1081.494 kb on + strand at 1081.494 kb on + strand at 1081.571 kb on + strand at 1081.575 kb on + strand at 1081.598 kb on + strand at 1081.602 kb on + strand at 1081.768 kb on - strand at 1081.903 kb on + strand at 1081.937 kb on + strand at 1081.938 kb on - strand at 1081.950 kb on - strand at 1081.954 kb on - strand at 1081.978 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction molybdate 0.25 M remove 1,079,774 + +0.2 1,079,774 + +0.9 1,079,774 + +0.1 1,079,774 + +0.5 1,079,774 + +0.6 1,079,775 - -0.7 1,079,775 - +0.3 1,079,777 - Pf6N2E2_918 0.10 +0.1 1,079,777 - Pf6N2E2_918 0.10 +0.3 1,079,777 - Pf6N2E2_918 0.10 -1.2 1,079,956 - Pf6N2E2_918 0.36 +0.5 1,079,956 - Pf6N2E2_918 0.36 -0.7 1,079,959 + Pf6N2E2_918 0.37 -0.3 1,079,959 + Pf6N2E2_918 0.37 -1.6 1,079,959 + Pf6N2E2_918 0.37 -0.2 1,079,959 + Pf6N2E2_918 0.37 -2.7 1,079,959 + Pf6N2E2_918 0.37 -0.4 1,079,959 + Pf6N2E2_918 0.37 +0.5 1,079,960 - Pf6N2E2_918 0.37 -1.0 1,079,960 - Pf6N2E2_918 0.37 -0.9 1,079,960 - Pf6N2E2_918 0.37 -1.3 1,079,960 - Pf6N2E2_918 0.37 +0.7 1,079,960 - Pf6N2E2_918 0.37 -0.3 1,079,960 - Pf6N2E2_918 0.37 +0.4 1,080,042 + Pf6N2E2_918 0.49 -1.3 1,080,065 - Pf6N2E2_918 0.53 +0.7 1,080,190 + Pf6N2E2_918 0.71 +0.4 1,080,190 + Pf6N2E2_918 0.71 -0.1 1,080,190 + Pf6N2E2_918 0.71 +0.3 1,080,191 - Pf6N2E2_918 0.71 +0.0 1,080,193 + Pf6N2E2_918 0.71 +1.1 1,080,194 - Pf6N2E2_918 0.72 +0.6 1,080,194 - Pf6N2E2_918 0.72 -1.2 1,080,419 - -0.6 1,080,419 - -0.4 1,080,683 + +0.6 1,080,816 + Pf6N2E2_919 0.18 -0.7 1,080,907 + Pf6N2E2_919 0.53 -0.9 1,080,907 + Pf6N2E2_919 0.53 -1.2 1,081,012 + -2.7 1,081,073 + -2.0 1,081,089 + +1.1 1,081,194 + +0.5 1,081,317 + +0.6 1,081,318 - -0.7 1,081,481 + +1.3 1,081,482 - -0.1 1,081,494 + -0.6 1,081,494 + +1.1 1,081,494 + +1.6 1,081,571 + +1.6 1,081,575 + -0.7 1,081,598 + +0.7 1,081,602 + +1.5 1,081,768 - -0.9 1,081,903 + +0.7 1,081,937 + +1.2 1,081,938 - +1.9 1,081,950 - +0.3 1,081,954 - -0.7 1,081,978 - +0.1
Or see this region's nucleotide sequence