Experiment: molybdate 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5732 and Pf6N2E2_5733 are separated by 289 nucleotides Pf6N2E2_5733 and Pf6N2E2_5734 are separated by 164 nucleotides Pf6N2E2_5734 and Pf6N2E2_5735 are separated by 181 nucleotides
Pf6N2E2_5732 - Chromosomal replication initiator protein DnaA, at 6,549,412 to 6,550,116
_5732
Pf6N2E2_5733 - NLP/P60 family protein, at 6,550,406 to 6,550,957
_5733
Pf6N2E2_5734 - NLP/P60 family protein, at 6,551,122 to 6,551,655
_5734
Pf6N2E2_5735 - L-sorbosone dehydrogenase, at 6,551,837 to 6,553,147
_5735
Position (kb)
6550
6551 Strain fitness (log2 ratio)
-2
-1
0
1 at 6550.114 kb on + strand at 6550.115 kb on - strand at 6550.185 kb on - strand at 6550.220 kb on + strand at 6550.220 kb on + strand at 6550.226 kb on + strand at 6550.226 kb on + strand at 6550.226 kb on + strand at 6550.226 kb on + strand at 6550.227 kb on - strand at 6550.227 kb on - strand at 6550.282 kb on + strand at 6550.282 kb on + strand at 6550.282 kb on + strand at 6550.282 kb on + strand at 6550.283 kb on - strand at 6550.292 kb on - strand at 6550.306 kb on + strand at 6550.306 kb on + strand at 6550.306 kb on + strand at 6550.307 kb on - strand at 6550.309 kb on + strand at 6550.335 kb on + strand at 6550.336 kb on - strand at 6550.529 kb on + strand, within Pf6N2E2_5733 at 6550.529 kb on + strand, within Pf6N2E2_5733 at 6550.529 kb on + strand, within Pf6N2E2_5733 at 6550.805 kb on + strand, within Pf6N2E2_5733 at 6550.805 kb on + strand, within Pf6N2E2_5733 at 6550.805 kb on + strand, within Pf6N2E2_5733 at 6550.805 kb on + strand, within Pf6N2E2_5733 at 6550.883 kb on + strand, within Pf6N2E2_5733 at 6550.883 kb on + strand, within Pf6N2E2_5733 at 6550.955 kb on + strand at 6550.955 kb on + strand at 6550.956 kb on - strand at 6551.121 kb on + strand at 6551.121 kb on + strand at 6551.121 kb on + strand at 6551.121 kb on + strand at 6551.121 kb on + strand at 6551.121 kb on + strand at 6551.122 kb on - strand at 6551.122 kb on - strand at 6551.122 kb on - strand at 6551.122 kb on - strand at 6551.122 kb on - strand at 6551.122 kb on - strand at 6551.122 kb on - strand at 6551.122 kb on - strand at 6551.122 kb on - strand at 6551.122 kb on - strand at 6551.122 kb on - strand at 6551.122 kb on - strand at 6551.122 kb on - strand at 6551.317 kb on - strand, within Pf6N2E2_5734 at 6551.317 kb on - strand, within Pf6N2E2_5734 at 6551.317 kb on - strand, within Pf6N2E2_5734 at 6551.317 kb on - strand, within Pf6N2E2_5734 at 6551.356 kb on + strand, within Pf6N2E2_5734 at 6551.512 kb on + strand, within Pf6N2E2_5734 at 6551.512 kb on + strand, within Pf6N2E2_5734 at 6551.512 kb on + strand, within Pf6N2E2_5734 at 6551.512 kb on + strand, within Pf6N2E2_5734 at 6551.512 kb on + strand, within Pf6N2E2_5734 at 6551.512 kb on + strand, within Pf6N2E2_5734 at 6551.512 kb on + strand, within Pf6N2E2_5734 at 6551.512 kb on + strand, within Pf6N2E2_5734 at 6551.512 kb on + strand, within Pf6N2E2_5734 at 6551.513 kb on - strand, within Pf6N2E2_5734 at 6551.513 kb on - strand, within Pf6N2E2_5734 at 6551.513 kb on - strand, within Pf6N2E2_5734 at 6551.513 kb on - strand, within Pf6N2E2_5734 at 6551.513 kb on - strand, within Pf6N2E2_5734 at 6551.513 kb on - strand, within Pf6N2E2_5734 at 6551.513 kb on - strand, within Pf6N2E2_5734 at 6551.513 kb on - strand, within Pf6N2E2_5734 at 6551.513 kb on - strand, within Pf6N2E2_5734 at 6551.513 kb on - strand, within Pf6N2E2_5734 at 6551.513 kb on - strand, within Pf6N2E2_5734 at 6551.513 kb on - strand, within Pf6N2E2_5734 at 6551.602 kb on + strand at 6551.602 kb on + strand at 6551.602 kb on + strand at 6551.603 kb on - strand at 6551.676 kb on + strand at 6551.676 kb on + strand at 6551.676 kb on + strand at 6551.838 kb on + strand at 6551.838 kb on + strand at 6551.838 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction molybdate 0.25 M remove 6,550,114 + +0.0 6,550,115 - -0.2 6,550,185 - -2.3 6,550,220 + -0.1 6,550,220 + +1.0 6,550,226 + -0.2 6,550,226 + -0.6 6,550,226 + -1.9 6,550,226 + -0.2 6,550,227 - -0.5 6,550,227 - +1.4 6,550,282 + +0.7 6,550,282 + +0.3 6,550,282 + +0.5 6,550,282 + -1.0 6,550,283 - -1.6 6,550,292 - -0.8 6,550,306 + +0.6 6,550,306 + -2.5 6,550,306 + -0.6 6,550,307 - -1.5 6,550,309 + -0.8 6,550,335 + -1.0 6,550,336 - -1.0 6,550,529 + Pf6N2E2_5733 0.22 -1.6 6,550,529 + Pf6N2E2_5733 0.22 -1.3 6,550,529 + Pf6N2E2_5733 0.22 -0.6 6,550,805 + Pf6N2E2_5733 0.72 -2.2 6,550,805 + Pf6N2E2_5733 0.72 +0.7 6,550,805 + Pf6N2E2_5733 0.72 -1.6 6,550,805 + Pf6N2E2_5733 0.72 -0.6 6,550,883 + Pf6N2E2_5733 0.86 -2.3 6,550,883 + Pf6N2E2_5733 0.86 -1.9 6,550,955 + +0.3 6,550,955 + +1.2 6,550,956 - -0.2 6,551,121 + -0.6 6,551,121 + -0.8 6,551,121 + -0.5 6,551,121 + +1.6 6,551,121 + +1.1 6,551,121 + -1.9 6,551,122 - -0.7 6,551,122 - -1.9 6,551,122 - -0.7 6,551,122 - -1.4 6,551,122 - -1.3 6,551,122 - -1.0 6,551,122 - -1.5 6,551,122 - -0.8 6,551,122 - -1.3 6,551,122 - -1.6 6,551,122 - -1.1 6,551,122 - -1.2 6,551,122 - -2.0 6,551,317 - Pf6N2E2_5734 0.37 +0.3 6,551,317 - Pf6N2E2_5734 0.37 +0.2 6,551,317 - Pf6N2E2_5734 0.37 -2.0 6,551,317 - Pf6N2E2_5734 0.37 -0.6 6,551,356 + Pf6N2E2_5734 0.44 -1.2 6,551,512 + Pf6N2E2_5734 0.73 -1.2 6,551,512 + Pf6N2E2_5734 0.73 +0.0 6,551,512 + Pf6N2E2_5734 0.73 -1.4 6,551,512 + Pf6N2E2_5734 0.73 -1.5 6,551,512 + Pf6N2E2_5734 0.73 -0.9 6,551,512 + Pf6N2E2_5734 0.73 -2.4 6,551,512 + Pf6N2E2_5734 0.73 -0.3 6,551,512 + Pf6N2E2_5734 0.73 -0.3 6,551,512 + Pf6N2E2_5734 0.73 -0.2 6,551,513 - Pf6N2E2_5734 0.73 -0.2 6,551,513 - Pf6N2E2_5734 0.73 -1.3 6,551,513 - Pf6N2E2_5734 0.73 -0.7 6,551,513 - Pf6N2E2_5734 0.73 -0.0 6,551,513 - Pf6N2E2_5734 0.73 -0.2 6,551,513 - Pf6N2E2_5734 0.73 -0.2 6,551,513 - Pf6N2E2_5734 0.73 -1.5 6,551,513 - Pf6N2E2_5734 0.73 -1.2 6,551,513 - Pf6N2E2_5734 0.73 -1.6 6,551,513 - Pf6N2E2_5734 0.73 -1.8 6,551,513 - Pf6N2E2_5734 0.73 +0.7 6,551,513 - Pf6N2E2_5734 0.73 -2.3 6,551,602 + -1.4 6,551,602 + -1.9 6,551,602 + -0.0 6,551,603 - +0.5 6,551,676 + -0.0 6,551,676 + -0.9 6,551,676 + -0.3 6,551,838 + -1.8 6,551,838 + -1.8 6,551,838 + -1.5
Or see this region's nucleotide sequence