Experiment: molybdate 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5603 and Pf6N2E2_5604 are separated by 164 nucleotides Pf6N2E2_5604 and Pf6N2E2_5605 are separated by 66 nucleotides Pf6N2E2_5605 and Pf6N2E2_5606 are separated by 244 nucleotides Pf6N2E2_5606 and Pf6N2E2_5607 are separated by 50 nucleotides
Pf6N2E2_5603 - 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100), at 6,418,645 to 6,419,403
_5603
Pf6N2E2_5604 - Putative heme iron utilization protein, at 6,419,568 to 6,420,299
_5604
Pf6N2E2_5605 - FxsA protein, at 6,420,366 to 6,420,842
_5605
Pf6N2E2_5606 - Heat shock protein 60 family co-chaperone GroES, at 6,421,087 to 6,421,380
_5606
Pf6N2E2_5607 - Heat shock protein 60 family chaperone GroEL, at 6,421,431 to 6,423,074
_5607
Position (kb)
6420
6421 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 6419.376 kb on + strand at 6419.376 kb on + strand at 6419.383 kb on + strand at 6419.383 kb on + strand at 6419.383 kb on + strand at 6419.384 kb on - strand at 6419.384 kb on - strand at 6419.384 kb on - strand at 6419.384 kb on - strand at 6419.384 kb on - strand at 6419.496 kb on + strand at 6419.497 kb on - strand at 6419.497 kb on - strand at 6419.540 kb on - strand at 6419.564 kb on + strand at 6419.565 kb on - strand at 6419.565 kb on - strand at 6419.617 kb on - strand at 6419.826 kb on + strand, within Pf6N2E2_5604 at 6419.886 kb on + strand, within Pf6N2E2_5604 at 6419.886 kb on + strand, within Pf6N2E2_5604 at 6419.889 kb on + strand, within Pf6N2E2_5604 at 6419.889 kb on + strand, within Pf6N2E2_5604 at 6419.889 kb on + strand, within Pf6N2E2_5604 at 6419.890 kb on - strand, within Pf6N2E2_5604 at 6419.896 kb on - strand, within Pf6N2E2_5604 at 6419.896 kb on - strand, within Pf6N2E2_5604 at 6419.916 kb on + strand, within Pf6N2E2_5604 at 6419.916 kb on + strand, within Pf6N2E2_5604 at 6419.970 kb on + strand, within Pf6N2E2_5604 at 6419.971 kb on - strand, within Pf6N2E2_5604 at 6419.971 kb on - strand, within Pf6N2E2_5604 at 6420.001 kb on + strand, within Pf6N2E2_5604 at 6420.097 kb on - strand, within Pf6N2E2_5604 at 6420.250 kb on - strand at 6420.323 kb on + strand at 6420.324 kb on - strand at 6420.333 kb on + strand at 6420.333 kb on + strand at 6420.333 kb on + strand at 6420.334 kb on - strand at 6420.419 kb on - strand, within Pf6N2E2_5605 at 6420.419 kb on - strand, within Pf6N2E2_5605 at 6420.419 kb on - strand, within Pf6N2E2_5605 at 6420.785 kb on + strand, within Pf6N2E2_5605 at 6420.840 kb on + strand at 6420.840 kb on + strand at 6420.841 kb on - strand at 6420.841 kb on - strand at 6420.920 kb on + strand at 6420.920 kb on + strand at 6420.920 kb on + strand at 6420.939 kb on + strand at 6420.943 kb on + strand at 6420.943 kb on + strand at 6421.031 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction molybdate 0.25 M remove 6,419,376 + +1.7 6,419,376 + +0.9 6,419,383 + -0.3 6,419,383 + -1.1 6,419,383 + -0.9 6,419,384 - +1.5 6,419,384 - -0.7 6,419,384 - +1.0 6,419,384 - -0.3 6,419,384 - -0.3 6,419,496 + -1.1 6,419,497 - +0.4 6,419,497 - -0.6 6,419,540 - +0.1 6,419,564 + +1.9 6,419,565 - +0.5 6,419,565 - +0.2 6,419,617 - +0.0 6,419,826 + Pf6N2E2_5604 0.35 +0.9 6,419,886 + Pf6N2E2_5604 0.43 -0.1 6,419,886 + Pf6N2E2_5604 0.43 -1.4 6,419,889 + Pf6N2E2_5604 0.44 -1.3 6,419,889 + Pf6N2E2_5604 0.44 -0.6 6,419,889 + Pf6N2E2_5604 0.44 -0.4 6,419,890 - Pf6N2E2_5604 0.44 -2.7 6,419,896 - Pf6N2E2_5604 0.45 -0.5 6,419,896 - Pf6N2E2_5604 0.45 +2.0 6,419,916 + Pf6N2E2_5604 0.48 +0.2 6,419,916 + Pf6N2E2_5604 0.48 +0.3 6,419,970 + Pf6N2E2_5604 0.55 +0.6 6,419,971 - Pf6N2E2_5604 0.55 -0.3 6,419,971 - Pf6N2E2_5604 0.55 -2.4 6,420,001 + Pf6N2E2_5604 0.59 +0.2 6,420,097 - Pf6N2E2_5604 0.72 -1.0 6,420,250 - +0.0 6,420,323 + -0.4 6,420,324 - -0.3 6,420,333 + -0.7 6,420,333 + -1.0 6,420,333 + +0.6 6,420,334 - -0.5 6,420,419 - Pf6N2E2_5605 0.11 -0.6 6,420,419 - Pf6N2E2_5605 0.11 -0.6 6,420,419 - Pf6N2E2_5605 0.11 -0.5 6,420,785 + Pf6N2E2_5605 0.88 -1.5 6,420,840 + -0.0 6,420,840 + -0.3 6,420,841 - -0.4 6,420,841 - -0.0 6,420,920 + +0.4 6,420,920 + +0.8 6,420,920 + +1.2 6,420,939 + +0.9 6,420,943 + -1.6 6,420,943 + +1.3 6,421,031 + +0.9
Or see this region's nucleotide sequence