Experiment: molybdate 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_50 and Pf6N2E2_51 are separated by 15 nucleotides Pf6N2E2_51 and Pf6N2E2_52 are separated by 121 nucleotides Pf6N2E2_52 and Pf6N2E2_53 are separated by 224 nucleotides
Pf6N2E2_50 - Biosynthetic Aromatic amino acid aminotransferase alpha (EC 2.6.1.57) @ Aromatic-amino-acid aminotransferase (EC 2.6.1.57), at 88,788 to 89,984
_50
Pf6N2E2_51 - hypothetical protein, at 90,000 to 90,194
_51
Pf6N2E2_52 - Excinuclease ABC subunit B, at 90,316 to 92,331
_52
Pf6N2E2_53 - Glutamyl-tRNA synthetase (EC 6.1.1.17) @ Glutamyl-tRNA(Gln) synthetase (EC 6.1.1.24), at 92,556 to 94,037
_53
Position (kb)
90
91
92
93 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 89.530 kb on + strand, within Pf6N2E2_50 at 89.531 kb on - strand, within Pf6N2E2_50 at 89.758 kb on + strand, within Pf6N2E2_50 at 89.759 kb on - strand, within Pf6N2E2_50 at 89.786 kb on - strand, within Pf6N2E2_50 at 89.786 kb on - strand, within Pf6N2E2_50 at 89.786 kb on - strand, within Pf6N2E2_50 at 89.786 kb on - strand, within Pf6N2E2_50 at 89.852 kb on + strand, within Pf6N2E2_50 at 89.852 kb on + strand, within Pf6N2E2_50 at 89.853 kb on - strand, within Pf6N2E2_50 at 89.853 kb on - strand, within Pf6N2E2_50 at 89.872 kb on + strand at 89.872 kb on + strand at 89.873 kb on - strand at 89.903 kb on + strand at 89.985 kb on + strand at 89.986 kb on - strand at 89.998 kb on + strand at 89.999 kb on - strand at 90.065 kb on + strand, within Pf6N2E2_51 at 90.065 kb on + strand, within Pf6N2E2_51 at 90.065 kb on + strand, within Pf6N2E2_51 at 90.065 kb on + strand, within Pf6N2E2_51 at 90.065 kb on + strand, within Pf6N2E2_51 at 90.065 kb on + strand, within Pf6N2E2_51 at 90.066 kb on - strand, within Pf6N2E2_51 at 90.066 kb on - strand, within Pf6N2E2_51 at 90.066 kb on - strand, within Pf6N2E2_51 at 90.066 kb on - strand, within Pf6N2E2_51 at 90.066 kb on - strand, within Pf6N2E2_51 at 90.066 kb on - strand, within Pf6N2E2_51 at 90.066 kb on - strand, within Pf6N2E2_51 at 90.066 kb on - strand, within Pf6N2E2_51 at 90.066 kb on - strand, within Pf6N2E2_51 at 90.066 kb on - strand, within Pf6N2E2_51 at 90.068 kb on + strand, within Pf6N2E2_51 at 90.068 kb on + strand, within Pf6N2E2_51 at 90.068 kb on + strand, within Pf6N2E2_51 at 90.068 kb on + strand, within Pf6N2E2_51 at 90.069 kb on - strand, within Pf6N2E2_51 at 90.069 kb on - strand, within Pf6N2E2_51 at 90.070 kb on + strand, within Pf6N2E2_51 at 90.070 kb on + strand, within Pf6N2E2_51 at 90.070 kb on + strand, within Pf6N2E2_51 at 90.070 kb on + strand, within Pf6N2E2_51 at 90.071 kb on - strand, within Pf6N2E2_51 at 90.178 kb on + strand at 90.178 kb on + strand at 90.310 kb on + strand at 90.310 kb on + strand at 90.310 kb on + strand at 90.311 kb on - strand at 90.332 kb on + strand at 90.332 kb on + strand at 90.333 kb on - strand at 90.532 kb on + strand, within Pf6N2E2_52 at 90.532 kb on + strand, within Pf6N2E2_52 at 90.574 kb on + strand, within Pf6N2E2_52 at 90.574 kb on + strand, within Pf6N2E2_52 at 90.575 kb on - strand, within Pf6N2E2_52 at 90.586 kb on + strand, within Pf6N2E2_52 at 90.587 kb on - strand, within Pf6N2E2_52 at 90.595 kb on + strand, within Pf6N2E2_52 at 90.595 kb on + strand, within Pf6N2E2_52 at 90.598 kb on + strand, within Pf6N2E2_52 at 90.599 kb on - strand, within Pf6N2E2_52 at 90.599 kb on - strand, within Pf6N2E2_52 at 90.599 kb on - strand, within Pf6N2E2_52 at 90.613 kb on + strand, within Pf6N2E2_52 at 90.614 kb on - strand, within Pf6N2E2_52 at 90.614 kb on - strand, within Pf6N2E2_52 at 90.748 kb on + strand, within Pf6N2E2_52 at 90.748 kb on + strand, within Pf6N2E2_52 at 90.749 kb on - strand, within Pf6N2E2_52 at 90.772 kb on + strand, within Pf6N2E2_52 at 90.773 kb on - strand, within Pf6N2E2_52 at 90.773 kb on - strand, within Pf6N2E2_52 at 90.773 kb on - strand, within Pf6N2E2_52 at 90.853 kb on + strand, within Pf6N2E2_52 at 90.853 kb on + strand, within Pf6N2E2_52 at 90.853 kb on + strand, within Pf6N2E2_52 at 90.854 kb on - strand, within Pf6N2E2_52 at 90.854 kb on - strand, within Pf6N2E2_52 at 91.043 kb on - strand, within Pf6N2E2_52 at 91.057 kb on + strand, within Pf6N2E2_52 at 91.058 kb on - strand, within Pf6N2E2_52 at 91.058 kb on - strand, within Pf6N2E2_52 at 91.129 kb on + strand, within Pf6N2E2_52 at 91.130 kb on - strand, within Pf6N2E2_52 at 91.217 kb on - strand, within Pf6N2E2_52 at 91.237 kb on + strand, within Pf6N2E2_52 at 91.288 kb on + strand, within Pf6N2E2_52 at 91.288 kb on + strand, within Pf6N2E2_52 at 91.288 kb on + strand, within Pf6N2E2_52 at 91.288 kb on + strand, within Pf6N2E2_52 at 91.288 kb on + strand, within Pf6N2E2_52 at 91.288 kb on + strand, within Pf6N2E2_52 at 91.288 kb on + strand, within Pf6N2E2_52 at 91.288 kb on + strand, within Pf6N2E2_52 at 91.288 kb on + strand, within Pf6N2E2_52 at 91.288 kb on + strand, within Pf6N2E2_52 at 91.288 kb on + strand, within Pf6N2E2_52 at 91.288 kb on + strand, within Pf6N2E2_52 at 91.288 kb on + strand, within Pf6N2E2_52 at 91.288 kb on + strand, within Pf6N2E2_52 at 91.288 kb on + strand, within Pf6N2E2_52 at 91.288 kb on + strand, within Pf6N2E2_52 at 91.288 kb on + strand, within Pf6N2E2_52 at 91.288 kb on + strand, within Pf6N2E2_52 at 91.289 kb on - strand, within Pf6N2E2_52 at 91.289 kb on - strand, within Pf6N2E2_52 at 91.289 kb on - strand, within Pf6N2E2_52 at 91.289 kb on - strand, within Pf6N2E2_52 at 91.289 kb on - strand, within Pf6N2E2_52 at 91.289 kb on - strand, within Pf6N2E2_52 at 91.289 kb on - strand, within Pf6N2E2_52 at 91.295 kb on - strand, within Pf6N2E2_52 at 91.363 kb on + strand, within Pf6N2E2_52 at 91.363 kb on + strand, within Pf6N2E2_52 at 91.363 kb on + strand, within Pf6N2E2_52 at 91.364 kb on - strand, within Pf6N2E2_52 at 91.364 kb on - strand, within Pf6N2E2_52 at 91.364 kb on - strand, within Pf6N2E2_52 at 91.507 kb on + strand, within Pf6N2E2_52 at 91.507 kb on + strand, within Pf6N2E2_52 at 91.507 kb on + strand, within Pf6N2E2_52 at 91.508 kb on - strand, within Pf6N2E2_52 at 91.508 kb on - strand, within Pf6N2E2_52 at 91.508 kb on - strand, within Pf6N2E2_52 at 91.733 kb on - strand, within Pf6N2E2_52 at 92.177 kb on - strand at 92.243 kb on - strand at 92.536 kb on + strand at 92.536 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction molybdate 0.25 M remove 89,530 + Pf6N2E2_50 0.62 -1.6 89,531 - Pf6N2E2_50 0.62 -1.1 89,758 + Pf6N2E2_50 0.81 +0.0 89,759 - Pf6N2E2_50 0.81 +0.4 89,786 - Pf6N2E2_50 0.83 -2.2 89,786 - Pf6N2E2_50 0.83 +0.1 89,786 - Pf6N2E2_50 0.83 +0.5 89,786 - Pf6N2E2_50 0.83 -2.3 89,852 + Pf6N2E2_50 0.89 +0.7 89,852 + Pf6N2E2_50 0.89 +0.8 89,853 - Pf6N2E2_50 0.89 +0.7 89,853 - Pf6N2E2_50 0.89 -1.1 89,872 + -1.4 89,872 + -0.1 89,873 - +0.7 89,903 + +0.1 89,985 + +0.7 89,986 - -0.1 89,998 + -0.1 89,999 - -0.4 90,065 + Pf6N2E2_51 0.33 +0.3 90,065 + Pf6N2E2_51 0.33 +0.7 90,065 + Pf6N2E2_51 0.33 +0.5 90,065 + Pf6N2E2_51 0.33 +1.0 90,065 + Pf6N2E2_51 0.33 -0.1 90,065 + Pf6N2E2_51 0.33 +0.2 90,066 - Pf6N2E2_51 0.34 -0.2 90,066 - Pf6N2E2_51 0.34 +1.2 90,066 - Pf6N2E2_51 0.34 +0.1 90,066 - Pf6N2E2_51 0.34 -0.1 90,066 - Pf6N2E2_51 0.34 -0.9 90,066 - Pf6N2E2_51 0.34 +0.2 90,066 - Pf6N2E2_51 0.34 -0.1 90,066 - Pf6N2E2_51 0.34 -1.6 90,066 - Pf6N2E2_51 0.34 +0.6 90,066 - Pf6N2E2_51 0.34 -0.3 90,068 + Pf6N2E2_51 0.35 +0.4 90,068 + Pf6N2E2_51 0.35 -0.1 90,068 + Pf6N2E2_51 0.35 +0.1 90,068 + Pf6N2E2_51 0.35 -0.9 90,069 - Pf6N2E2_51 0.35 +0.4 90,069 - Pf6N2E2_51 0.35 +2.5 90,070 + Pf6N2E2_51 0.36 +0.6 90,070 + Pf6N2E2_51 0.36 -1.5 90,070 + Pf6N2E2_51 0.36 +1.4 90,070 + Pf6N2E2_51 0.36 -0.9 90,071 - Pf6N2E2_51 0.36 -0.4 90,178 + +0.2 90,178 + -0.5 90,310 + -0.2 90,310 + -1.9 90,310 + +0.8 90,311 - +0.5 90,332 + -1.5 90,332 + -1.2 90,333 - -0.9 90,532 + Pf6N2E2_52 0.11 -1.3 90,532 + Pf6N2E2_52 0.11 -0.7 90,574 + Pf6N2E2_52 0.13 +0.2 90,574 + Pf6N2E2_52 0.13 -1.2 90,575 - Pf6N2E2_52 0.13 -0.2 90,586 + Pf6N2E2_52 0.13 +0.3 90,587 - Pf6N2E2_52 0.13 -2.2 90,595 + Pf6N2E2_52 0.14 -1.5 90,595 + Pf6N2E2_52 0.14 -1.1 90,598 + Pf6N2E2_52 0.14 -2.6 90,599 - Pf6N2E2_52 0.14 -0.2 90,599 - Pf6N2E2_52 0.14 -0.8 90,599 - Pf6N2E2_52 0.14 -0.1 90,613 + Pf6N2E2_52 0.15 -2.1 90,614 - Pf6N2E2_52 0.15 -1.3 90,614 - Pf6N2E2_52 0.15 +0.5 90,748 + Pf6N2E2_52 0.21 -1.8 90,748 + Pf6N2E2_52 0.21 -0.6 90,749 - Pf6N2E2_52 0.21 -1.3 90,772 + Pf6N2E2_52 0.23 +0.4 90,773 - Pf6N2E2_52 0.23 +0.2 90,773 - Pf6N2E2_52 0.23 -0.1 90,773 - Pf6N2E2_52 0.23 -2.7 90,853 + Pf6N2E2_52 0.27 -0.6 90,853 + Pf6N2E2_52 0.27 -0.7 90,853 + Pf6N2E2_52 0.27 -1.9 90,854 - Pf6N2E2_52 0.27 -1.1 90,854 - Pf6N2E2_52 0.27 -0.9 91,043 - Pf6N2E2_52 0.36 -2.1 91,057 + Pf6N2E2_52 0.37 -0.2 91,058 - Pf6N2E2_52 0.37 -1.1 91,058 - Pf6N2E2_52 0.37 -0.7 91,129 + Pf6N2E2_52 0.40 -2.2 91,130 - Pf6N2E2_52 0.40 -0.8 91,217 - Pf6N2E2_52 0.45 -2.7 91,237 + Pf6N2E2_52 0.46 -0.6 91,288 + Pf6N2E2_52 0.48 -0.4 91,288 + Pf6N2E2_52 0.48 -2.2 91,288 + Pf6N2E2_52 0.48 -3.0 91,288 + Pf6N2E2_52 0.48 -1.6 91,288 + Pf6N2E2_52 0.48 -0.3 91,288 + Pf6N2E2_52 0.48 -0.8 91,288 + Pf6N2E2_52 0.48 -1.8 91,288 + Pf6N2E2_52 0.48 -2.4 91,288 + Pf6N2E2_52 0.48 -0.8 91,288 + Pf6N2E2_52 0.48 -2.9 91,288 + Pf6N2E2_52 0.48 -0.6 91,288 + Pf6N2E2_52 0.48 -0.2 91,288 + Pf6N2E2_52 0.48 -1.6 91,288 + Pf6N2E2_52 0.48 -2.0 91,288 + Pf6N2E2_52 0.48 -0.2 91,288 + Pf6N2E2_52 0.48 -1.3 91,288 + Pf6N2E2_52 0.48 -3.3 91,288 + Pf6N2E2_52 0.48 +0.3 91,289 - Pf6N2E2_52 0.48 -1.0 91,289 - Pf6N2E2_52 0.48 -0.9 91,289 - Pf6N2E2_52 0.48 -0.9 91,289 - Pf6N2E2_52 0.48 +0.1 91,289 - Pf6N2E2_52 0.48 -1.1 91,289 - Pf6N2E2_52 0.48 -2.6 91,289 - Pf6N2E2_52 0.48 -0.5 91,295 - Pf6N2E2_52 0.49 -1.2 91,363 + Pf6N2E2_52 0.52 -0.2 91,363 + Pf6N2E2_52 0.52 -0.5 91,363 + Pf6N2E2_52 0.52 -0.5 91,364 - Pf6N2E2_52 0.52 -1.1 91,364 - Pf6N2E2_52 0.52 -1.6 91,364 - Pf6N2E2_52 0.52 +0.9 91,507 + Pf6N2E2_52 0.59 +0.4 91,507 + Pf6N2E2_52 0.59 -0.8 91,507 + Pf6N2E2_52 0.59 +0.9 91,508 - Pf6N2E2_52 0.59 -2.6 91,508 - Pf6N2E2_52 0.59 -1.0 91,508 - Pf6N2E2_52 0.59 -1.1 91,733 - Pf6N2E2_52 0.70 -2.5 92,177 - +0.3 92,243 - -1.1 92,536 + -1.5 92,536 + +0.2
Or see this region's nucleotide sequence