Experiment: molybdate 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5149 and Pf6N2E2_5150 are separated by 199 nucleotides Pf6N2E2_5150 and Pf6N2E2_5151 are separated by 342 nucleotides Pf6N2E2_5151 and Pf6N2E2_5152 are separated by 184 nucleotides
Pf6N2E2_5149 - Acetyl-coenzyme A synthetase (EC 6.2.1.1), at 5,934,559 to 5,936,496
_5149
Pf6N2E2_5150 - Glucose-6-phosphate isomerase (EC 5.3.1.9), at 5,936,696 to 5,938,360
_5150
Pf6N2E2_5151 - Aspartate 1-decarboxylase (EC 4.1.1.11), at 5,938,703 to 5,939,083
_5151
Pf6N2E2_5152 - Pantoate--beta-alanine ligase (EC 6.3.2.1), at 5,939,268 to 5,940,128
_5152
Position (kb) 5936
5937
5938
5939 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 5935.718 kb on + strand, within Pf6N2E2_5149 at 5935.718 kb on + strand, within Pf6N2E2_5149 at 5935.718 kb on + strand, within Pf6N2E2_5149 at 5935.718 kb on + strand, within Pf6N2E2_5149 at 5935.718 kb on + strand, within Pf6N2E2_5149 at 5935.719 kb on - strand, within Pf6N2E2_5149 at 5935.719 kb on - strand, within Pf6N2E2_5149 at 5935.719 kb on - strand, within Pf6N2E2_5149 at 5935.797 kb on - strand, within Pf6N2E2_5149 at 5935.797 kb on - strand, within Pf6N2E2_5149 at 5935.900 kb on - strand, within Pf6N2E2_5149 at 5936.044 kb on - strand, within Pf6N2E2_5149 at 5936.044 kb on - strand, within Pf6N2E2_5149 at 5936.060 kb on + strand, within Pf6N2E2_5149 at 5936.087 kb on + strand, within Pf6N2E2_5149 at 5936.087 kb on + strand, within Pf6N2E2_5149 at 5936.087 kb on + strand, within Pf6N2E2_5149 at 5936.087 kb on + strand, within Pf6N2E2_5149 at 5936.087 kb on + strand, within Pf6N2E2_5149 at 5936.087 kb on + strand, within Pf6N2E2_5149 at 5936.088 kb on - strand, within Pf6N2E2_5149 at 5936.088 kb on - strand, within Pf6N2E2_5149 at 5936.088 kb on - strand, within Pf6N2E2_5149 at 5936.088 kb on - strand, within Pf6N2E2_5149 at 5936.088 kb on - strand, within Pf6N2E2_5149 at 5936.321 kb on + strand at 5936.322 kb on - strand at 5936.412 kb on + strand at 5936.412 kb on + strand at 5936.412 kb on + strand at 5936.414 kb on + strand at 5936.414 kb on + strand at 5936.414 kb on + strand at 5936.414 kb on + strand at 5936.414 kb on + strand at 5936.426 kb on + strand at 5936.426 kb on + strand at 5936.426 kb on + strand at 5936.426 kb on + strand at 5936.427 kb on - strand at 5936.508 kb on - strand at 5936.671 kb on + strand at 5936.672 kb on - strand at 5936.672 kb on - strand at 5936.672 kb on - strand at 5936.672 kb on - strand at 5936.672 kb on - strand at 5936.721 kb on + strand at 5936.722 kb on - strand at 5936.722 kb on - strand at 5936.722 kb on - strand at 5936.722 kb on - strand at 5936.722 kb on - strand at 5936.787 kb on + strand at 5936.787 kb on + strand at 5936.787 kb on + strand at 5936.883 kb on + strand, within Pf6N2E2_5150 at 5936.883 kb on + strand, within Pf6N2E2_5150 at 5936.883 kb on + strand, within Pf6N2E2_5150 at 5936.884 kb on - strand, within Pf6N2E2_5150 at 5936.884 kb on - strand, within Pf6N2E2_5150 at 5937.087 kb on + strand, within Pf6N2E2_5150 at 5937.087 kb on + strand, within Pf6N2E2_5150 at 5937.088 kb on - strand, within Pf6N2E2_5150 at 5937.186 kb on + strand, within Pf6N2E2_5150 at 5937.187 kb on - strand, within Pf6N2E2_5150 at 5937.253 kb on + strand, within Pf6N2E2_5150 at 5937.253 kb on + strand, within Pf6N2E2_5150 at 5937.320 kb on - strand, within Pf6N2E2_5150 at 5937.456 kb on + strand, within Pf6N2E2_5150 at 5937.456 kb on + strand, within Pf6N2E2_5150 at 5937.538 kb on - strand, within Pf6N2E2_5150 at 5937.810 kb on + strand, within Pf6N2E2_5150 at 5938.049 kb on + strand, within Pf6N2E2_5150 at 5938.194 kb on + strand at 5938.353 kb on + strand at 5938.353 kb on + strand at 5938.354 kb on - strand at 5938.354 kb on - strand at 5938.397 kb on + strand at 5938.397 kb on + strand at 5938.397 kb on + strand at 5938.398 kb on - strand at 5938.403 kb on - strand at 5938.473 kb on + strand at 5938.473 kb on + strand at 5938.473 kb on + strand at 5938.474 kb on - strand at 5938.474 kb on - strand at 5938.478 kb on + strand at 5938.479 kb on - strand at 5938.479 kb on - strand at 5938.479 kb on - strand at 5938.536 kb on + strand at 5938.536 kb on + strand at 5938.582 kb on + strand at 5938.582 kb on + strand at 5938.582 kb on + strand at 5938.583 kb on - strand at 5938.583 kb on - strand at 5938.633 kb on - strand at 5938.633 kb on - strand at 5938.764 kb on + strand, within Pf6N2E2_5151 at 5938.764 kb on + strand, within Pf6N2E2_5151 at 5938.764 kb on + strand, within Pf6N2E2_5151 at 5938.764 kb on + strand, within Pf6N2E2_5151 at 5938.764 kb on + strand at 5938.765 kb on - strand, within Pf6N2E2_5151 at 5938.765 kb on - strand, within Pf6N2E2_5151 at 5938.765 kb on - strand, within Pf6N2E2_5151 at 5938.765 kb on - strand, within Pf6N2E2_5151 at 5938.765 kb on - strand, within Pf6N2E2_5151 at 5938.815 kb on + strand, within Pf6N2E2_5151 at 5938.911 kb on + strand, within Pf6N2E2_5151 at 5938.912 kb on - strand, within Pf6N2E2_5151 at 5938.912 kb on - strand, within Pf6N2E2_5151 at 5938.912 kb on - strand, within Pf6N2E2_5151 at 5938.912 kb on - strand, within Pf6N2E2_5151 at 5938.912 kb on - strand, within Pf6N2E2_5151 at 5938.912 kb on - strand, within Pf6N2E2_5151 at 5938.944 kb on + strand, within Pf6N2E2_5151 at 5938.945 kb on - strand, within Pf6N2E2_5151 at 5938.945 kb on - strand, within Pf6N2E2_5151 at 5938.945 kb on - strand, within Pf6N2E2_5151 at 5938.945 kb on - strand, within Pf6N2E2_5151 at 5938.962 kb on + strand, within Pf6N2E2_5151 at 5938.962 kb on + strand, within Pf6N2E2_5151 at 5938.963 kb on - strand, within Pf6N2E2_5151 at 5938.963 kb on - strand, within Pf6N2E2_5151 at 5939.019 kb on + strand, within Pf6N2E2_5151 at 5939.147 kb on + strand at 5939.147 kb on + strand at 5939.148 kb on - strand at 5939.269 kb on + strand at 5939.270 kb on - strand at 5939.270 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction molybdate 0.25 M remove 5,935,718 + Pf6N2E2_5149 0.60 +2.0 5,935,718 + Pf6N2E2_5149 0.60 +0.8 5,935,718 + Pf6N2E2_5149 0.60 -0.5 5,935,718 + Pf6N2E2_5149 0.60 -0.1 5,935,718 + Pf6N2E2_5149 0.60 +0.5 5,935,719 - Pf6N2E2_5149 0.60 -0.3 5,935,719 - Pf6N2E2_5149 0.60 +0.7 5,935,719 - Pf6N2E2_5149 0.60 -0.8 5,935,797 - Pf6N2E2_5149 0.64 +0.8 5,935,797 - Pf6N2E2_5149 0.64 -0.8 5,935,900 - Pf6N2E2_5149 0.69 +0.5 5,936,044 - Pf6N2E2_5149 0.77 -0.7 5,936,044 - Pf6N2E2_5149 0.77 +0.3 5,936,060 + Pf6N2E2_5149 0.77 -0.2 5,936,087 + Pf6N2E2_5149 0.79 +0.9 5,936,087 + Pf6N2E2_5149 0.79 -1.3 5,936,087 + Pf6N2E2_5149 0.79 -0.5 5,936,087 + Pf6N2E2_5149 0.79 -1.8 5,936,087 + Pf6N2E2_5149 0.79 -0.3 5,936,087 + Pf6N2E2_5149 0.79 +0.3 5,936,088 - Pf6N2E2_5149 0.79 +0.7 5,936,088 - Pf6N2E2_5149 0.79 +0.0 5,936,088 - Pf6N2E2_5149 0.79 -0.7 5,936,088 - Pf6N2E2_5149 0.79 +1.3 5,936,088 - Pf6N2E2_5149 0.79 +3.6 5,936,321 + -0.4 5,936,322 - +0.4 5,936,412 + -0.4 5,936,412 + -0.3 5,936,412 + -0.5 5,936,414 + +0.0 5,936,414 + -0.2 5,936,414 + +0.9 5,936,414 + +2.0 5,936,414 + +1.0 5,936,426 + -0.1 5,936,426 + +0.1 5,936,426 + +0.2 5,936,426 + -0.3 5,936,427 - -1.9 5,936,508 - +0.3 5,936,671 + +1.6 5,936,672 - +0.5 5,936,672 - +0.2 5,936,672 - +0.6 5,936,672 - -1.9 5,936,672 - +1.5 5,936,721 + -2.7 5,936,722 - -2.0 5,936,722 - -1.9 5,936,722 - -2.0 5,936,722 - -1.8 5,936,722 - -1.7 5,936,787 + -2.0 5,936,787 + -1.7 5,936,787 + +0.7 5,936,883 + Pf6N2E2_5150 0.11 -2.0 5,936,883 + Pf6N2E2_5150 0.11 -2.1 5,936,883 + Pf6N2E2_5150 0.11 -3.0 5,936,884 - Pf6N2E2_5150 0.11 -2.0 5,936,884 - Pf6N2E2_5150 0.11 -1.1 5,937,087 + Pf6N2E2_5150 0.23 -0.3 5,937,087 + Pf6N2E2_5150 0.23 +0.2 5,937,088 - Pf6N2E2_5150 0.24 -2.3 5,937,186 + Pf6N2E2_5150 0.29 -3.1 5,937,187 - Pf6N2E2_5150 0.29 -2.8 5,937,253 + Pf6N2E2_5150 0.33 +1.3 5,937,253 + Pf6N2E2_5150 0.33 -1.0 5,937,320 - Pf6N2E2_5150 0.37 -1.1 5,937,456 + Pf6N2E2_5150 0.46 -3.0 5,937,456 + Pf6N2E2_5150 0.46 -2.2 5,937,538 - Pf6N2E2_5150 0.51 -3.3 5,937,810 + Pf6N2E2_5150 0.67 -1.1 5,938,049 + Pf6N2E2_5150 0.81 -0.8 5,938,194 + -0.8 5,938,353 + -2.0 5,938,353 + -1.5 5,938,354 - -1.8 5,938,354 - -1.9 5,938,397 + -1.8 5,938,397 + -1.7 5,938,397 + +0.9 5,938,398 - +1.1 5,938,403 - -0.8 5,938,473 + -1.4 5,938,473 + -0.1 5,938,473 + -0.6 5,938,474 - +0.2 5,938,474 - -0.3 5,938,478 + -0.4 5,938,479 - +0.0 5,938,479 - -0.0 5,938,479 - -1.3 5,938,536 + -0.7 5,938,536 + -0.1 5,938,582 + -0.3 5,938,582 + -1.2 5,938,582 + -0.2 5,938,583 - +0.0 5,938,583 - +0.2 5,938,633 - -1.4 5,938,633 - -0.9 5,938,764 + Pf6N2E2_5151 0.16 -0.0 5,938,764 + Pf6N2E2_5151 0.16 -0.1 5,938,764 + Pf6N2E2_5151 0.16 +1.5 5,938,764 + Pf6N2E2_5151 0.16 +0.2 5,938,764 + +0.0 5,938,765 - Pf6N2E2_5151 0.16 +0.5 5,938,765 - Pf6N2E2_5151 0.16 +0.5 5,938,765 - Pf6N2E2_5151 0.16 +1.0 5,938,765 - Pf6N2E2_5151 0.16 -0.4 5,938,765 - Pf6N2E2_5151 0.16 -1.2 5,938,815 + Pf6N2E2_5151 0.29 -0.3 5,938,911 + Pf6N2E2_5151 0.55 +0.3 5,938,912 - Pf6N2E2_5151 0.55 -0.2 5,938,912 - Pf6N2E2_5151 0.55 +0.1 5,938,912 - Pf6N2E2_5151 0.55 +0.0 5,938,912 - Pf6N2E2_5151 0.55 +0.7 5,938,912 - Pf6N2E2_5151 0.55 +0.5 5,938,912 - Pf6N2E2_5151 0.55 -0.4 5,938,944 + Pf6N2E2_5151 0.63 -1.0 5,938,945 - Pf6N2E2_5151 0.64 +0.4 5,938,945 - Pf6N2E2_5151 0.64 +0.8 5,938,945 - Pf6N2E2_5151 0.64 +2.0 5,938,945 - Pf6N2E2_5151 0.64 +0.3 5,938,962 + Pf6N2E2_5151 0.68 +1.4 5,938,962 + Pf6N2E2_5151 0.68 -0.5 5,938,963 - Pf6N2E2_5151 0.68 -0.0 5,938,963 - Pf6N2E2_5151 0.68 +0.6 5,939,019 + Pf6N2E2_5151 0.83 +2.0 5,939,147 + -0.8 5,939,147 + -0.5 5,939,148 - -0.4 5,939,269 + -0.7 5,939,270 - +0.3 5,939,270 - -0.4
Or see this region's nucleotide sequence