Experiment: molybdate 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5127 and Pf6N2E2_5128 overlap by 4 nucleotides Pf6N2E2_5128 and Pf6N2E2_5129 are separated by 130 nucleotides
Pf6N2E2_5127 - Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70), at 5,911,362 to 5,912,282
_5127
Pf6N2E2_5128 - COG1496: Uncharacterized conserved protein, at 5,912,279 to 5,913,004
_5128
Pf6N2E2_5129 - ClpB protein, at 5,913,135 to 5,915,699
_5129
Position (kb) 5912
5913
5914 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5912.472 kb on + strand, within Pf6N2E2_5128 at 5912.851 kb on + strand, within Pf6N2E2_5128 at 5912.855 kb on + strand, within Pf6N2E2_5128 at 5912.855 kb on + strand, within Pf6N2E2_5128 at 5912.856 kb on - strand, within Pf6N2E2_5128 at 5912.856 kb on - strand, within Pf6N2E2_5128 at 5912.903 kb on + strand, within Pf6N2E2_5128 at 5913.003 kb on - strand at 5913.019 kb on + strand at 5913.020 kb on - strand at 5913.020 kb on - strand at 5913.062 kb on + strand at 5913.062 kb on + strand at 5913.062 kb on + strand at 5913.062 kb on + strand at 5913.062 kb on + strand at 5913.062 kb on + strand at 5913.063 kb on - strand at 5913.063 kb on - strand at 5913.063 kb on - strand at 5913.063 kb on - strand at 5913.063 kb on - strand at 5913.063 kb on - strand at 5913.063 kb on - strand at 5913.063 kb on - strand at 5913.063 kb on - strand at 5913.063 kb on - strand at 5913.070 kb on + strand at 5913.071 kb on - strand at 5913.071 kb on - strand at 5913.071 kb on - strand at 5913.071 kb on - strand at 5913.121 kb on + strand at 5913.140 kb on + strand at 5913.140 kb on + strand at 5913.140 kb on + strand at 5913.140 kb on + strand at 5913.141 kb on - strand at 5913.141 kb on - strand at 5913.163 kb on + strand at 5913.163 kb on + strand at 5913.164 kb on - strand at 5913.164 kb on - strand at 5913.164 kb on - strand at 5913.164 kb on - strand at 5913.347 kb on - strand at 5913.552 kb on - strand, within Pf6N2E2_5129 at 5913.624 kb on + strand, within Pf6N2E2_5129 at 5913.624 kb on + strand, within Pf6N2E2_5129 at 5913.624 kb on + strand, within Pf6N2E2_5129 at 5913.624 kb on + strand, within Pf6N2E2_5129 at 5913.624 kb on + strand, within Pf6N2E2_5129 at 5913.625 kb on - strand at 5913.625 kb on - strand, within Pf6N2E2_5129 at 5913.625 kb on - strand, within Pf6N2E2_5129 at 5913.625 kb on - strand, within Pf6N2E2_5129 at 5913.625 kb on - strand, within Pf6N2E2_5129 at 5913.701 kb on + strand, within Pf6N2E2_5129 at 5913.702 kb on - strand, within Pf6N2E2_5129 at 5913.767 kb on + strand, within Pf6N2E2_5129 at 5913.768 kb on - strand, within Pf6N2E2_5129 at 5913.836 kb on + strand, within Pf6N2E2_5129 at 5913.885 kb on + strand, within Pf6N2E2_5129 at 5913.885 kb on + strand, within Pf6N2E2_5129
Per-strain Table
Position Strand Gene LocusTag Fraction molybdate 0.25 M remove 5,912,472 + Pf6N2E2_5128 0.27 -1.4 5,912,851 + Pf6N2E2_5128 0.79 -3.2 5,912,855 + Pf6N2E2_5128 0.79 -1.1 5,912,855 + Pf6N2E2_5128 0.79 +0.5 5,912,856 - Pf6N2E2_5128 0.79 -1.1 5,912,856 - Pf6N2E2_5128 0.79 -0.8 5,912,903 + Pf6N2E2_5128 0.86 -3.1 5,913,003 - -1.7 5,913,019 + -0.5 5,913,020 - +0.8 5,913,020 - -0.0 5,913,062 + -0.6 5,913,062 + -1.0 5,913,062 + +0.5 5,913,062 + -0.1 5,913,062 + +0.5 5,913,062 + +1.3 5,913,063 - +0.1 5,913,063 - +0.1 5,913,063 - -1.4 5,913,063 - -0.1 5,913,063 - -0.3 5,913,063 - +0.8 5,913,063 - -0.8 5,913,063 - +0.1 5,913,063 - -0.1 5,913,063 - +1.3 5,913,070 + -0.6 5,913,071 - -0.1 5,913,071 - -1.2 5,913,071 - +2.3 5,913,071 - +0.5 5,913,121 + +0.1 5,913,140 + +0.0 5,913,140 + +1.7 5,913,140 + +1.0 5,913,140 + +0.9 5,913,141 - -0.2 5,913,141 - -0.3 5,913,163 + +0.6 5,913,163 + +0.8 5,913,164 - +1.7 5,913,164 - -0.0 5,913,164 - +0.4 5,913,164 - +1.1 5,913,347 - -2.1 5,913,552 - Pf6N2E2_5129 0.16 -1.7 5,913,624 + Pf6N2E2_5129 0.19 +0.4 5,913,624 + Pf6N2E2_5129 0.19 +0.6 5,913,624 + Pf6N2E2_5129 0.19 +0.1 5,913,624 + Pf6N2E2_5129 0.19 +0.1 5,913,624 + Pf6N2E2_5129 0.19 +0.0 5,913,625 - +0.0 5,913,625 - Pf6N2E2_5129 0.19 -0.9 5,913,625 - Pf6N2E2_5129 0.19 +0.6 5,913,625 - Pf6N2E2_5129 0.19 +0.1 5,913,625 - Pf6N2E2_5129 0.19 +0.1 5,913,701 + Pf6N2E2_5129 0.22 +1.1 5,913,702 - Pf6N2E2_5129 0.22 -0.4 5,913,767 + Pf6N2E2_5129 0.25 +0.2 5,913,768 - Pf6N2E2_5129 0.25 -0.6 5,913,836 + Pf6N2E2_5129 0.27 +1.1 5,913,885 + Pf6N2E2_5129 0.29 +0.4 5,913,885 + Pf6N2E2_5129 0.29 -2.3
Or see this region's nucleotide sequence