Experiment: molybdate 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_5102 and Pf6N2E2_5103 are separated by 267 nucleotides Pf6N2E2_5103 and Pf6N2E2_5104 are separated by 9 nucleotides Pf6N2E2_5104 and Pf6N2E2_5105 are separated by 80 nucleotides
Pf6N2E2_5102 - GTP-binding protein Obg, at 5,883,505 to 5,884,728
_5102
Pf6N2E2_5103 - Glutamate 5-kinase (EC 2.7.2.11) / RNA-binding C-terminal domain PUA, at 5,884,996 to 5,886,114
_5103
Pf6N2E2_5104 - Conserved uncharacterized protein CreA, at 5,886,124 to 5,886,579
_5104
Pf6N2E2_5105 - hypothetical protein, at 5,886,660 to 5,888,699
_5105
Position (kb)
5884
5885
5886
5887 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5884.714 kb on + strand at 5884.714 kb on + strand at 5884.715 kb on - strand at 5884.715 kb on - strand at 5884.762 kb on + strand at 5884.799 kb on + strand at 5884.799 kb on + strand at 5884.800 kb on - strand at 5884.800 kb on - strand at 5884.920 kb on + strand at 5884.937 kb on + strand at 5884.937 kb on + strand at 5884.937 kb on + strand at 5885.846 kb on + strand, within Pf6N2E2_5103 at 5885.846 kb on + strand, within Pf6N2E2_5103 at 5886.287 kb on - strand, within Pf6N2E2_5104 at 5886.381 kb on + strand, within Pf6N2E2_5104 at 5886.381 kb on + strand, within Pf6N2E2_5104 at 5886.381 kb on + strand, within Pf6N2E2_5104 at 5886.489 kb on + strand, within Pf6N2E2_5104 at 5886.489 kb on + strand, within Pf6N2E2_5104 at 5886.490 kb on - strand, within Pf6N2E2_5104 at 5886.490 kb on - strand, within Pf6N2E2_5104 at 5886.500 kb on - strand, within Pf6N2E2_5104 at 5886.500 kb on - strand, within Pf6N2E2_5104 at 5886.508 kb on + strand, within Pf6N2E2_5104 at 5886.508 kb on + strand, within Pf6N2E2_5104 at 5886.577 kb on + strand at 5886.578 kb on - strand at 5886.617 kb on + strand at 5886.621 kb on + strand at 5886.622 kb on - strand at 5886.659 kb on + strand at 5886.660 kb on - strand at 5886.660 kb on - strand at 5886.685 kb on + strand at 5886.730 kb on - strand at 5886.760 kb on + strand at 5886.797 kb on + strand at 5886.820 kb on + strand at 5886.820 kb on + strand at 5886.820 kb on + strand at 5886.826 kb on - strand at 5886.826 kb on - strand at 5886.876 kb on + strand, within Pf6N2E2_5105 at 5886.876 kb on + strand, within Pf6N2E2_5105 at 5886.876 kb on + strand, within Pf6N2E2_5105 at 5886.877 kb on - strand, within Pf6N2E2_5105 at 5886.906 kb on + strand, within Pf6N2E2_5105 at 5886.906 kb on + strand, within Pf6N2E2_5105 at 5886.907 kb on - strand, within Pf6N2E2_5105
Per-strain Table
Position Strand Gene LocusTag Fraction molybdate 0.25 M remove 5,884,714 + -0.0 5,884,714 + +0.8 5,884,715 - -2.7 5,884,715 - +1.3 5,884,762 + -0.8 5,884,799 + -0.1 5,884,799 + +1.9 5,884,800 - +0.1 5,884,800 - +0.5 5,884,920 + -0.9 5,884,937 + -1.3 5,884,937 + -0.9 5,884,937 + +0.5 5,885,846 + Pf6N2E2_5103 0.76 -0.3 5,885,846 + Pf6N2E2_5103 0.76 -1.3 5,886,287 - Pf6N2E2_5104 0.36 -1.2 5,886,381 + Pf6N2E2_5104 0.56 -0.5 5,886,381 + Pf6N2E2_5104 0.56 -1.2 5,886,381 + Pf6N2E2_5104 0.56 -0.3 5,886,489 + Pf6N2E2_5104 0.80 +0.2 5,886,489 + Pf6N2E2_5104 0.80 -0.4 5,886,490 - Pf6N2E2_5104 0.80 -0.6 5,886,490 - Pf6N2E2_5104 0.80 +0.9 5,886,500 - Pf6N2E2_5104 0.82 +0.8 5,886,500 - Pf6N2E2_5104 0.82 +0.3 5,886,508 + Pf6N2E2_5104 0.84 +0.0 5,886,508 + Pf6N2E2_5104 0.84 -0.8 5,886,577 + -0.2 5,886,578 - -0.6 5,886,617 + -0.7 5,886,621 + +0.3 5,886,622 - -0.4 5,886,659 + -1.1 5,886,660 - -0.3 5,886,660 - +0.0 5,886,685 + +0.2 5,886,730 - -0.2 5,886,760 + +2.5 5,886,797 + +0.2 5,886,820 + -0.3 5,886,820 + +0.2 5,886,820 + +0.6 5,886,826 - +0.8 5,886,826 - -0.3 5,886,876 + Pf6N2E2_5105 0.11 -0.0 5,886,876 + Pf6N2E2_5105 0.11 +0.7 5,886,876 + Pf6N2E2_5105 0.11 -0.5 5,886,877 - Pf6N2E2_5105 0.11 +0.9 5,886,906 + Pf6N2E2_5105 0.12 -0.8 5,886,906 + Pf6N2E2_5105 0.12 -0.2 5,886,907 - Pf6N2E2_5105 0.12 +0.7
Or see this region's nucleotide sequence