Experiment: molybdate 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4152 and Pf6N2E2_4153 are separated by 10 nucleotides Pf6N2E2_4153 and Pf6N2E2_4154 are separated by 19 nucleotides
Pf6N2E2_4152 - alginate biosynthesis transcriptional regulatory protein AlgB, at 4,831,625 to 4,832,971
_4152
Pf6N2E2_4153 - Sensory box histidine kinase, at 4,832,982 to 4,834,772
_4153
Pf6N2E2_4154 - diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s), at 4,834,792 to 4,836,297
_4154
Position (kb) 4832
4833
4834
4835 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 4832.001 kb on + strand, within Pf6N2E2_4152 at 4832.001 kb on + strand, within Pf6N2E2_4152 at 4832.002 kb on - strand, within Pf6N2E2_4152 at 4832.314 kb on + strand, within Pf6N2E2_4152 at 4832.315 kb on - strand, within Pf6N2E2_4152 at 4832.426 kb on + strand, within Pf6N2E2_4152 at 4832.427 kb on - strand, within Pf6N2E2_4152 at 4832.466 kb on + strand, within Pf6N2E2_4152 at 4832.643 kb on - strand, within Pf6N2E2_4152 at 4832.643 kb on - strand, within Pf6N2E2_4152 at 4832.691 kb on + strand, within Pf6N2E2_4152 at 4832.691 kb on + strand, within Pf6N2E2_4152 at 4832.691 kb on + strand, within Pf6N2E2_4152 at 4832.691 kb on + strand, within Pf6N2E2_4152 at 4832.692 kb on - strand, within Pf6N2E2_4152 at 4832.692 kb on - strand, within Pf6N2E2_4152 at 4832.692 kb on - strand, within Pf6N2E2_4152 at 4832.960 kb on + strand at 4832.960 kb on + strand at 4832.960 kb on + strand at 4832.961 kb on - strand at 4832.961 kb on - strand at 4832.961 kb on - strand at 4832.961 kb on - strand at 4832.961 kb on - strand at 4832.961 kb on - strand at 4832.961 kb on - strand at 4832.961 kb on - strand at 4832.981 kb on + strand at 4832.981 kb on + strand at 4832.981 kb on + strand at 4832.981 kb on + strand at 4832.982 kb on - strand at 4832.982 kb on - strand at 4833.023 kb on + strand at 4833.024 kb on - strand at 4833.235 kb on - strand, within Pf6N2E2_4153 at 4833.318 kb on + strand, within Pf6N2E2_4153 at 4833.592 kb on + strand at 4833.592 kb on + strand, within Pf6N2E2_4153 at 4834.752 kb on + strand at 4834.752 kb on + strand at 4834.922 kb on + strand at 4834.922 kb on + strand at 4834.922 kb on + strand at 4834.922 kb on + strand at 4834.922 kb on + strand at 4834.922 kb on + strand at 4834.923 kb on - strand at 4834.923 kb on - strand at 4834.923 kb on - strand at 4834.923 kb on - strand at 4834.995 kb on + strand, within Pf6N2E2_4154 at 4834.995 kb on + strand, within Pf6N2E2_4154 at 4834.995 kb on + strand, within Pf6N2E2_4154 at 4834.996 kb on - strand, within Pf6N2E2_4154 at 4835.091 kb on - strand, within Pf6N2E2_4154 at 4835.091 kb on - strand, within Pf6N2E2_4154 at 4835.274 kb on + strand, within Pf6N2E2_4154 at 4835.275 kb on - strand, within Pf6N2E2_4154 at 4835.316 kb on + strand, within Pf6N2E2_4154 at 4835.316 kb on + strand, within Pf6N2E2_4154 at 4835.316 kb on + strand, within Pf6N2E2_4154 at 4835.316 kb on + strand, within Pf6N2E2_4154 at 4835.316 kb on + strand, within Pf6N2E2_4154 at 4835.316 kb on + strand, within Pf6N2E2_4154 at 4835.316 kb on + strand, within Pf6N2E2_4154 at 4835.317 kb on - strand, within Pf6N2E2_4154 at 4835.317 kb on - strand, within Pf6N2E2_4154 at 4835.317 kb on - strand, within Pf6N2E2_4154 at 4835.317 kb on - strand, within Pf6N2E2_4154 at 4835.317 kb on - strand, within Pf6N2E2_4154 at 4835.317 kb on - strand, within Pf6N2E2_4154 at 4835.317 kb on - strand, within Pf6N2E2_4154 at 4835.317 kb on - strand, within Pf6N2E2_4154 at 4835.317 kb on - strand, within Pf6N2E2_4154 at 4835.317 kb on - strand, within Pf6N2E2_4154 at 4835.317 kb on - strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.318 kb on + strand, within Pf6N2E2_4154 at 4835.319 kb on - strand, within Pf6N2E2_4154 at 4835.319 kb on - strand, within Pf6N2E2_4154 at 4835.319 kb on - strand, within Pf6N2E2_4154 at 4835.319 kb on - strand, within Pf6N2E2_4154 at 4835.319 kb on - strand, within Pf6N2E2_4154 at 4835.319 kb on - strand, within Pf6N2E2_4154 at 4835.319 kb on - strand, within Pf6N2E2_4154 at 4835.319 kb on - strand, within Pf6N2E2_4154 at 4835.319 kb on - strand, within Pf6N2E2_4154 at 4835.319 kb on - strand, within Pf6N2E2_4154 at 4835.319 kb on - strand, within Pf6N2E2_4154 at 4835.319 kb on - strand, within Pf6N2E2_4154 at 4835.319 kb on - strand, within Pf6N2E2_4154 at 4835.319 kb on - strand, within Pf6N2E2_4154 at 4835.319 kb on - strand, within Pf6N2E2_4154 at 4835.319 kb on - strand, within Pf6N2E2_4154 at 4835.319 kb on - strand, within Pf6N2E2_4154 at 4835.496 kb on + strand, within Pf6N2E2_4154 at 4835.496 kb on + strand, within Pf6N2E2_4154 at 4835.496 kb on + strand, within Pf6N2E2_4154 at 4835.496 kb on + strand, within Pf6N2E2_4154 at 4835.496 kb on + strand, within Pf6N2E2_4154 at 4835.496 kb on + strand, within Pf6N2E2_4154 at 4835.497 kb on - strand, within Pf6N2E2_4154 at 4835.497 kb on - strand, within Pf6N2E2_4154 at 4835.517 kb on + strand, within Pf6N2E2_4154 at 4835.518 kb on - strand, within Pf6N2E2_4154 at 4835.518 kb on - strand, within Pf6N2E2_4154 at 4835.518 kb on - strand, within Pf6N2E2_4154 at 4835.676 kb on + strand, within Pf6N2E2_4154 at 4835.676 kb on + strand, within Pf6N2E2_4154 at 4835.676 kb on + strand, within Pf6N2E2_4154 at 4835.677 kb on - strand, within Pf6N2E2_4154 at 4835.677 kb on - strand, within Pf6N2E2_4154 at 4835.711 kb on + strand, within Pf6N2E2_4154 at 4835.712 kb on - strand, within Pf6N2E2_4154 at 4835.712 kb on - strand, within Pf6N2E2_4154 at 4835.738 kb on + strand, within Pf6N2E2_4154 at 4835.739 kb on - strand, within Pf6N2E2_4154
Per-strain Table
Position Strand Gene LocusTag Fraction molybdate 0.25 M remove 4,832,001 + Pf6N2E2_4152 0.28 +0.9 4,832,001 + Pf6N2E2_4152 0.28 +2.4 4,832,002 - Pf6N2E2_4152 0.28 +1.7 4,832,314 + Pf6N2E2_4152 0.51 +2.4 4,832,315 - Pf6N2E2_4152 0.51 +1.5 4,832,426 + Pf6N2E2_4152 0.59 +2.1 4,832,427 - Pf6N2E2_4152 0.60 +2.1 4,832,466 + Pf6N2E2_4152 0.62 +1.5 4,832,643 - Pf6N2E2_4152 0.76 +1.5 4,832,643 - Pf6N2E2_4152 0.76 +1.5 4,832,691 + Pf6N2E2_4152 0.79 +2.8 4,832,691 + Pf6N2E2_4152 0.79 +1.6 4,832,691 + Pf6N2E2_4152 0.79 +0.6 4,832,691 + Pf6N2E2_4152 0.79 +1.9 4,832,692 - Pf6N2E2_4152 0.79 +1.4 4,832,692 - Pf6N2E2_4152 0.79 +1.7 4,832,692 - Pf6N2E2_4152 0.79 +1.8 4,832,960 + +1.7 4,832,960 + +1.6 4,832,960 + +2.6 4,832,961 - +0.5 4,832,961 - +1.5 4,832,961 - +1.6 4,832,961 - +1.5 4,832,961 - +2.3 4,832,961 - +2.0 4,832,961 - +1.5 4,832,961 - +1.7 4,832,981 + -1.3 4,832,981 + -0.8 4,832,981 + -0.9 4,832,981 + -1.8 4,832,982 - -2.6 4,832,982 - -3.5 4,833,023 + -2.6 4,833,024 - -2.4 4,833,235 - Pf6N2E2_4153 0.14 +0.7 4,833,318 + Pf6N2E2_4153 0.19 +0.3 4,833,592 + +1.3 4,833,592 + Pf6N2E2_4153 0.34 -1.7 4,834,752 + +0.7 4,834,752 + -1.8 4,834,922 + +0.5 4,834,922 + +0.4 4,834,922 + +0.5 4,834,922 + -0.7 4,834,922 + -0.3 4,834,922 + +1.3 4,834,923 - -3.0 4,834,923 - -0.7 4,834,923 - -0.8 4,834,923 - +0.0 4,834,995 + Pf6N2E2_4154 0.13 -0.3 4,834,995 + Pf6N2E2_4154 0.13 +0.6 4,834,995 + Pf6N2E2_4154 0.13 -0.4 4,834,996 - Pf6N2E2_4154 0.14 -0.1 4,835,091 - Pf6N2E2_4154 0.20 -0.1 4,835,091 - Pf6N2E2_4154 0.20 -1.4 4,835,274 + Pf6N2E2_4154 0.32 -0.4 4,835,275 - Pf6N2E2_4154 0.32 -0.8 4,835,316 + Pf6N2E2_4154 0.35 +0.6 4,835,316 + Pf6N2E2_4154 0.35 +0.4 4,835,316 + Pf6N2E2_4154 0.35 -1.4 4,835,316 + Pf6N2E2_4154 0.35 -0.0 4,835,316 + Pf6N2E2_4154 0.35 +0.9 4,835,316 + Pf6N2E2_4154 0.35 -0.6 4,835,316 + Pf6N2E2_4154 0.35 +0.1 4,835,317 - Pf6N2E2_4154 0.35 -1.2 4,835,317 - Pf6N2E2_4154 0.35 -0.5 4,835,317 - Pf6N2E2_4154 0.35 -0.6 4,835,317 - Pf6N2E2_4154 0.35 -0.2 4,835,317 - Pf6N2E2_4154 0.35 -0.1 4,835,317 - Pf6N2E2_4154 0.35 -0.6 4,835,317 - Pf6N2E2_4154 0.35 +0.1 4,835,317 - Pf6N2E2_4154 0.35 +0.4 4,835,317 - Pf6N2E2_4154 0.35 -0.2 4,835,317 - Pf6N2E2_4154 0.35 -0.3 4,835,317 - Pf6N2E2_4154 0.35 -0.3 4,835,318 + Pf6N2E2_4154 0.35 +0.4 4,835,318 + Pf6N2E2_4154 0.35 -0.2 4,835,318 + Pf6N2E2_4154 0.35 +1.4 4,835,318 + Pf6N2E2_4154 0.35 -1.8 4,835,318 + Pf6N2E2_4154 0.35 -0.3 4,835,318 + Pf6N2E2_4154 0.35 -0.5 4,835,318 + Pf6N2E2_4154 0.35 +0.0 4,835,318 + Pf6N2E2_4154 0.35 -0.2 4,835,318 + Pf6N2E2_4154 0.35 -0.2 4,835,318 + Pf6N2E2_4154 0.35 +0.8 4,835,318 + Pf6N2E2_4154 0.35 +1.2 4,835,318 + Pf6N2E2_4154 0.35 +0.3 4,835,318 + Pf6N2E2_4154 0.35 +0.5 4,835,318 + Pf6N2E2_4154 0.35 +1.5 4,835,318 + Pf6N2E2_4154 0.35 -0.9 4,835,318 + Pf6N2E2_4154 0.35 +0.7 4,835,318 + Pf6N2E2_4154 0.35 +0.1 4,835,318 + Pf6N2E2_4154 0.35 -0.1 4,835,318 + Pf6N2E2_4154 0.35 -1.1 4,835,318 + Pf6N2E2_4154 0.35 -0.0 4,835,319 - Pf6N2E2_4154 0.35 -2.4 4,835,319 - Pf6N2E2_4154 0.35 -2.7 4,835,319 - Pf6N2E2_4154 0.35 -0.5 4,835,319 - Pf6N2E2_4154 0.35 -0.3 4,835,319 - Pf6N2E2_4154 0.35 -0.2 4,835,319 - Pf6N2E2_4154 0.35 -0.9 4,835,319 - Pf6N2E2_4154 0.35 -0.4 4,835,319 - Pf6N2E2_4154 0.35 -0.5 4,835,319 - Pf6N2E2_4154 0.35 -0.2 4,835,319 - Pf6N2E2_4154 0.35 +0.2 4,835,319 - Pf6N2E2_4154 0.35 +0.5 4,835,319 - Pf6N2E2_4154 0.35 +0.4 4,835,319 - Pf6N2E2_4154 0.35 -0.7 4,835,319 - Pf6N2E2_4154 0.35 -0.7 4,835,319 - Pf6N2E2_4154 0.35 -0.5 4,835,319 - Pf6N2E2_4154 0.35 -0.6 4,835,319 - Pf6N2E2_4154 0.35 -1.3 4,835,496 + Pf6N2E2_4154 0.47 +0.0 4,835,496 + Pf6N2E2_4154 0.47 +0.8 4,835,496 + Pf6N2E2_4154 0.47 +0.6 4,835,496 + Pf6N2E2_4154 0.47 +1.0 4,835,496 + Pf6N2E2_4154 0.47 -0.4 4,835,496 + Pf6N2E2_4154 0.47 -0.2 4,835,497 - Pf6N2E2_4154 0.47 -0.5 4,835,497 - Pf6N2E2_4154 0.47 -1.4 4,835,517 + Pf6N2E2_4154 0.48 +0.9 4,835,518 - Pf6N2E2_4154 0.48 +0.5 4,835,518 - Pf6N2E2_4154 0.48 +0.4 4,835,518 - Pf6N2E2_4154 0.48 -0.4 4,835,676 + Pf6N2E2_4154 0.59 +0.5 4,835,676 + Pf6N2E2_4154 0.59 -0.9 4,835,676 + Pf6N2E2_4154 0.59 +0.2 4,835,677 - Pf6N2E2_4154 0.59 +0.2 4,835,677 - Pf6N2E2_4154 0.59 -1.0 4,835,711 + Pf6N2E2_4154 0.61 -1.1 4,835,712 - Pf6N2E2_4154 0.61 -0.2 4,835,712 - Pf6N2E2_4154 0.61 -0.4 4,835,738 + Pf6N2E2_4154 0.63 -0.4 4,835,739 - Pf6N2E2_4154 0.63 -1.2
Or see this region's nucleotide sequence