Experiment: molybdate 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_3876 and Pf6N2E2_3877 are separated by 253 nucleotides Pf6N2E2_3877 and Pf6N2E2_3878 are separated by 243 nucleotides
Pf6N2E2_3876 - Agmatine deiminase (EC 3.5.3.12), at 4,506,298 to 4,507,404
_3876
Pf6N2E2_3877 - 4-aminobutyrate aminotransferase (EC 2.6.1.19), at 4,507,658 to 4,510,537
_3877
Pf6N2E2_3878 - dTDP-glucose 4,6-dehydratase (EC 4.2.1.46), at 4,510,781 to 4,511,863
_3878
Position (kb)
4507
4508
4509
4510
4511 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4506.677 kb on + strand, within Pf6N2E2_3876 at 4506.677 kb on + strand, within Pf6N2E2_3876 at 4506.734 kb on + strand, within Pf6N2E2_3876 at 4506.735 kb on - strand, within Pf6N2E2_3876 at 4506.735 kb on - strand, within Pf6N2E2_3876 at 4506.735 kb on - strand, within Pf6N2E2_3876 at 4506.735 kb on - strand, within Pf6N2E2_3876 at 4507.199 kb on + strand, within Pf6N2E2_3876 at 4507.262 kb on - strand, within Pf6N2E2_3876 at 4507.590 kb on + strand at 4507.590 kb on + strand at 4507.590 kb on + strand at 4507.590 kb on + strand at 4507.590 kb on + strand at 4507.590 kb on + strand at 4507.590 kb on + strand at 4507.590 kb on + strand at 4507.590 kb on + strand at 4507.590 kb on + strand at 4507.590 kb on + strand at 4507.591 kb on - strand at 4507.591 kb on - strand at 4507.591 kb on - strand at 4507.591 kb on - strand at 4507.591 kb on - strand at 4507.591 kb on - strand at 4507.591 kb on - strand at 4507.591 kb on - strand at 4507.627 kb on + strand at 4507.659 kb on + strand at 4507.690 kb on + strand at 4507.690 kb on + strand at 4507.690 kb on + strand at 4507.690 kb on + strand at 4507.690 kb on + strand at 4507.690 kb on + strand at 4507.690 kb on + strand at 4507.690 kb on + strand at 4507.690 kb on + strand at 4507.690 kb on + strand at 4507.690 kb on + strand at 4507.690 kb on + strand at 4507.690 kb on + strand at 4507.690 kb on + strand at 4507.690 kb on + strand at 4507.690 kb on + strand at 4507.691 kb on - strand at 4507.691 kb on - strand at 4507.691 kb on - strand at 4507.691 kb on - strand at 4507.691 kb on - strand at 4507.691 kb on - strand at 4507.691 kb on - strand at 4507.691 kb on - strand at 4507.691 kb on - strand at 4507.691 kb on - strand at 4507.691 kb on - strand at 4507.691 kb on - strand at 4507.691 kb on - strand at 4507.691 kb on - strand at 4507.691 kb on - strand at 4507.691 kb on - strand at 4507.691 kb on - strand at 4507.694 kb on + strand at 4507.694 kb on + strand at 4507.694 kb on + strand at 4507.694 kb on + strand at 4507.695 kb on - strand at 4507.695 kb on - strand at 4507.695 kb on - strand at 4507.695 kb on - strand at 4507.695 kb on - strand at 4507.695 kb on - strand at 4507.758 kb on + strand at 4507.758 kb on + strand at 4507.759 kb on - strand at 4507.876 kb on - strand at 4507.876 kb on - strand at 4508.058 kb on + strand, within Pf6N2E2_3877 at 4508.058 kb on + strand, within Pf6N2E2_3877 at 4508.059 kb on - strand, within Pf6N2E2_3877 at 4508.059 kb on - strand, within Pf6N2E2_3877 at 4508.163 kb on - strand, within Pf6N2E2_3877 at 4508.163 kb on - strand, within Pf6N2E2_3877 at 4508.265 kb on + strand, within Pf6N2E2_3877 at 4508.317 kb on - strand, within Pf6N2E2_3877 at 4508.317 kb on - strand, within Pf6N2E2_3877 at 4508.397 kb on + strand, within Pf6N2E2_3877 at 4508.397 kb on + strand, within Pf6N2E2_3877 at 4508.398 kb on - strand, within Pf6N2E2_3877 at 4508.398 kb on - strand, within Pf6N2E2_3877 at 4508.436 kb on + strand, within Pf6N2E2_3877 at 4508.436 kb on + strand, within Pf6N2E2_3877 at 4508.436 kb on + strand, within Pf6N2E2_3877 at 4508.436 kb on + strand, within Pf6N2E2_3877 at 4508.437 kb on - strand, within Pf6N2E2_3877 at 4508.437 kb on - strand, within Pf6N2E2_3877 at 4508.437 kb on - strand, within Pf6N2E2_3877 at 4508.547 kb on + strand, within Pf6N2E2_3877 at 4508.548 kb on - strand, within Pf6N2E2_3877 at 4508.558 kb on + strand, within Pf6N2E2_3877 at 4508.559 kb on - strand, within Pf6N2E2_3877 at 4508.559 kb on - strand, within Pf6N2E2_3877 at 4508.709 kb on + strand, within Pf6N2E2_3877 at 4508.728 kb on + strand, within Pf6N2E2_3877 at 4508.729 kb on - strand, within Pf6N2E2_3877 at 4508.729 kb on - strand, within Pf6N2E2_3877 at 4508.809 kb on + strand, within Pf6N2E2_3877 at 4508.810 kb on - strand, within Pf6N2E2_3877 at 4508.817 kb on + strand, within Pf6N2E2_3877 at 4508.817 kb on + strand, within Pf6N2E2_3877 at 4508.818 kb on - strand, within Pf6N2E2_3877 at 4508.883 kb on + strand, within Pf6N2E2_3877 at 4508.883 kb on + strand, within Pf6N2E2_3877 at 4508.883 kb on + strand, within Pf6N2E2_3877 at 4508.883 kb on + strand, within Pf6N2E2_3877 at 4508.884 kb on - strand, within Pf6N2E2_3877 at 4508.884 kb on - strand, within Pf6N2E2_3877 at 4508.884 kb on - strand, within Pf6N2E2_3877 at 4508.884 kb on - strand, within Pf6N2E2_3877 at 4508.884 kb on - strand, within Pf6N2E2_3877 at 4508.884 kb on - strand, within Pf6N2E2_3877 at 4508.884 kb on - strand, within Pf6N2E2_3877 at 4508.884 kb on - strand, within Pf6N2E2_3877 at 4508.884 kb on - strand, within Pf6N2E2_3877 at 4508.884 kb on - strand, within Pf6N2E2_3877 at 4508.886 kb on + strand, within Pf6N2E2_3877 at 4508.886 kb on + strand, within Pf6N2E2_3877 at 4508.886 kb on + strand, within Pf6N2E2_3877 at 4508.886 kb on + strand, within Pf6N2E2_3877 at 4508.886 kb on + strand, within Pf6N2E2_3877 at 4508.886 kb on + strand, within Pf6N2E2_3877 at 4508.887 kb on - strand, within Pf6N2E2_3877 at 4508.887 kb on - strand, within Pf6N2E2_3877 at 4508.887 kb on - strand, within Pf6N2E2_3877 at 4508.887 kb on - strand, within Pf6N2E2_3877 at 4508.887 kb on - strand, within Pf6N2E2_3877 at 4508.887 kb on - strand, within Pf6N2E2_3877 at 4508.887 kb on - strand, within Pf6N2E2_3877 at 4508.999 kb on + strand, within Pf6N2E2_3877 at 4508.999 kb on + strand, within Pf6N2E2_3877 at 4508.999 kb on + strand, within Pf6N2E2_3877 at 4508.999 kb on + strand, within Pf6N2E2_3877 at 4508.999 kb on + strand, within Pf6N2E2_3877 at 4508.999 kb on + strand, within Pf6N2E2_3877 at 4509.000 kb on - strand, within Pf6N2E2_3877 at 4509.000 kb on - strand, within Pf6N2E2_3877 at 4509.000 kb on - strand, within Pf6N2E2_3877 at 4509.000 kb on - strand, within Pf6N2E2_3877 at 4509.282 kb on + strand, within Pf6N2E2_3877 at 4509.283 kb on - strand, within Pf6N2E2_3877 at 4509.283 kb on - strand, within Pf6N2E2_3877 at 4509.283 kb on - strand, within Pf6N2E2_3877 at 4509.283 kb on - strand, within Pf6N2E2_3877 at 4509.286 kb on + strand, within Pf6N2E2_3877 at 4509.331 kb on - strand, within Pf6N2E2_3877 at 4509.440 kb on + strand, within Pf6N2E2_3877 at 4509.440 kb on + strand, within Pf6N2E2_3877 at 4509.627 kb on + strand, within Pf6N2E2_3877 at 4509.627 kb on + strand, within Pf6N2E2_3877 at 4509.627 kb on + strand, within Pf6N2E2_3877 at 4509.627 kb on + strand, within Pf6N2E2_3877 at 4509.627 kb on + strand, within Pf6N2E2_3877 at 4509.628 kb on - strand, within Pf6N2E2_3877 at 4509.628 kb on - strand, within Pf6N2E2_3877 at 4509.750 kb on + strand, within Pf6N2E2_3877 at 4509.751 kb on - strand, within Pf6N2E2_3877 at 4509.751 kb on - strand, within Pf6N2E2_3877 at 4509.751 kb on - strand, within Pf6N2E2_3877 at 4510.133 kb on + strand, within Pf6N2E2_3877 at 4510.133 kb on + strand, within Pf6N2E2_3877 at 4510.133 kb on + strand, within Pf6N2E2_3877 at 4510.133 kb on + strand, within Pf6N2E2_3877 at 4510.133 kb on + strand, within Pf6N2E2_3877 at 4510.133 kb on + strand, within Pf6N2E2_3877 at 4510.221 kb on + strand, within Pf6N2E2_3877 at 4510.221 kb on + strand, within Pf6N2E2_3877 at 4510.221 kb on + strand, within Pf6N2E2_3877 at 4510.221 kb on + strand, within Pf6N2E2_3877 at 4510.222 kb on - strand, within Pf6N2E2_3877 at 4510.222 kb on - strand, within Pf6N2E2_3877 at 4510.222 kb on - strand, within Pf6N2E2_3877 at 4510.238 kb on - strand, within Pf6N2E2_3877 at 4510.378 kb on - strand at 4510.431 kb on + strand at 4510.431 kb on + strand at 4510.482 kb on + strand at 4510.559 kb on - strand at 4510.570 kb on + strand at 4510.570 kb on + strand at 4510.570 kb on + strand at 4510.570 kb on + strand at 4510.570 kb on + strand at 4510.571 kb on - strand at 4510.571 kb on - strand at 4510.571 kb on - strand at 4510.571 kb on - strand at 4510.571 kb on - strand at 4510.571 kb on - strand at 4510.571 kb on - strand at 4510.571 kb on - strand at 4510.571 kb on - strand at 4510.606 kb on - strand at 4510.628 kb on + strand at 4510.628 kb on + strand at 4510.675 kb on + strand at 4510.675 kb on + strand at 4510.675 kb on + strand at 4510.675 kb on + strand at 4510.675 kb on + strand at 4510.676 kb on - strand at 4510.676 kb on - strand at 4510.676 kb on - strand at 4510.676 kb on - strand at 4510.676 kb on - strand at 4510.676 kb on - strand at 4510.676 kb on - strand at 4510.676 kb on - strand at 4510.676 kb on - strand at 4510.676 kb on - strand at 4510.677 kb on + strand at 4510.677 kb on + strand at 4510.678 kb on - strand at 4510.730 kb on - strand at 4510.730 kb on - strand at 4510.730 kb on - strand at 4510.736 kb on + strand at 4510.736 kb on + strand at 4510.736 kb on + strand at 4510.736 kb on + strand at 4510.736 kb on + strand at 4510.736 kb on + strand at 4510.736 kb on + strand at 4510.736 kb on + strand at 4510.737 kb on - strand at 4510.737 kb on - strand at 4510.737 kb on - strand at 4510.737 kb on - strand at 4510.737 kb on - strand at 4510.737 kb on - strand at 4510.737 kb on - strand at 4510.737 kb on - strand at 4510.737 kb on - strand at 4510.737 kb on - strand at 4510.737 kb on - strand at 4510.737 kb on - strand at 4510.737 kb on - strand at 4510.744 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction molybdate 0.25 M remove 4,506,677 + Pf6N2E2_3876 0.34 -0.2 4,506,677 + Pf6N2E2_3876 0.34 +1.9 4,506,734 + Pf6N2E2_3876 0.39 +1.8 4,506,735 - Pf6N2E2_3876 0.39 +3.3 4,506,735 - Pf6N2E2_3876 0.39 +1.0 4,506,735 - Pf6N2E2_3876 0.39 +1.2 4,506,735 - Pf6N2E2_3876 0.39 +1.8 4,507,199 + Pf6N2E2_3876 0.81 +1.0 4,507,262 - Pf6N2E2_3876 0.87 +1.3 4,507,590 + -0.8 4,507,590 + +0.5 4,507,590 + +0.6 4,507,590 + +0.1 4,507,590 + +0.1 4,507,590 + -0.5 4,507,590 + -0.8 4,507,590 + -0.2 4,507,590 + -0.0 4,507,590 + +0.6 4,507,590 + -0.4 4,507,591 - -0.1 4,507,591 - -0.4 4,507,591 - +0.0 4,507,591 - -0.1 4,507,591 - -1.9 4,507,591 - +1.7 4,507,591 - +1.4 4,507,591 - -1.1 4,507,627 + +1.0 4,507,659 + -1.7 4,507,690 + -1.5 4,507,690 + -0.2 4,507,690 + -0.9 4,507,690 + +0.6 4,507,690 + -0.4 4,507,690 + -0.2 4,507,690 + -0.1 4,507,690 + -0.2 4,507,690 + +1.2 4,507,690 + -0.5 4,507,690 + +0.4 4,507,690 + +0.3 4,507,690 + +0.7 4,507,690 + -0.7 4,507,690 + +1.6 4,507,690 + +0.3 4,507,691 - -0.7 4,507,691 - +1.6 4,507,691 - -0.1 4,507,691 - +0.3 4,507,691 - -1.0 4,507,691 - -0.8 4,507,691 - -0.4 4,507,691 - +0.7 4,507,691 - +0.8 4,507,691 - +0.9 4,507,691 - +0.3 4,507,691 - +0.1 4,507,691 - +0.5 4,507,691 - -0.5 4,507,691 - -1.0 4,507,691 - +1.4 4,507,691 - -0.2 4,507,694 + -0.7 4,507,694 + +0.0 4,507,694 + +0.2 4,507,694 + -1.2 4,507,695 - -1.0 4,507,695 - +0.6 4,507,695 - +0.0 4,507,695 - +0.7 4,507,695 - +1.4 4,507,695 - +1.1 4,507,758 + -0.9 4,507,758 + -0.5 4,507,759 - -0.2 4,507,876 - -1.0 4,507,876 - -2.8 4,508,058 + Pf6N2E2_3877 0.14 -0.3 4,508,058 + Pf6N2E2_3877 0.14 +0.2 4,508,059 - Pf6N2E2_3877 0.14 -0.5 4,508,059 - Pf6N2E2_3877 0.14 +0.4 4,508,163 - Pf6N2E2_3877 0.18 -1.2 4,508,163 - Pf6N2E2_3877 0.18 -0.2 4,508,265 + Pf6N2E2_3877 0.21 +2.3 4,508,317 - Pf6N2E2_3877 0.23 +0.4 4,508,317 - Pf6N2E2_3877 0.23 +0.5 4,508,397 + Pf6N2E2_3877 0.26 -0.5 4,508,397 + Pf6N2E2_3877 0.26 -0.5 4,508,398 - Pf6N2E2_3877 0.26 +2.3 4,508,398 - Pf6N2E2_3877 0.26 -0.2 4,508,436 + Pf6N2E2_3877 0.27 +1.4 4,508,436 + Pf6N2E2_3877 0.27 -0.7 4,508,436 + Pf6N2E2_3877 0.27 -0.2 4,508,436 + Pf6N2E2_3877 0.27 -0.5 4,508,437 - Pf6N2E2_3877 0.27 -1.2 4,508,437 - Pf6N2E2_3877 0.27 -0.8 4,508,437 - Pf6N2E2_3877 0.27 -0.4 4,508,547 + Pf6N2E2_3877 0.31 -0.1 4,508,548 - Pf6N2E2_3877 0.31 +0.5 4,508,558 + Pf6N2E2_3877 0.31 -0.8 4,508,559 - Pf6N2E2_3877 0.31 +0.2 4,508,559 - Pf6N2E2_3877 0.31 +1.8 4,508,709 + Pf6N2E2_3877 0.36 -0.3 4,508,728 + Pf6N2E2_3877 0.37 -1.3 4,508,729 - Pf6N2E2_3877 0.37 -0.8 4,508,729 - Pf6N2E2_3877 0.37 -0.4 4,508,809 + Pf6N2E2_3877 0.40 -1.4 4,508,810 - Pf6N2E2_3877 0.40 -1.0 4,508,817 + Pf6N2E2_3877 0.40 -0.5 4,508,817 + Pf6N2E2_3877 0.40 -0.3 4,508,818 - Pf6N2E2_3877 0.40 -0.9 4,508,883 + Pf6N2E2_3877 0.43 +1.0 4,508,883 + Pf6N2E2_3877 0.43 +0.1 4,508,883 + Pf6N2E2_3877 0.43 -0.3 4,508,883 + Pf6N2E2_3877 0.43 -0.5 4,508,884 - Pf6N2E2_3877 0.43 -0.0 4,508,884 - Pf6N2E2_3877 0.43 +1.6 4,508,884 - Pf6N2E2_3877 0.43 +0.5 4,508,884 - Pf6N2E2_3877 0.43 +0.6 4,508,884 - Pf6N2E2_3877 0.43 +0.5 4,508,884 - Pf6N2E2_3877 0.43 +0.6 4,508,884 - Pf6N2E2_3877 0.43 +0.2 4,508,884 - Pf6N2E2_3877 0.43 -1.4 4,508,884 - Pf6N2E2_3877 0.43 -0.3 4,508,884 - Pf6N2E2_3877 0.43 -1.2 4,508,886 + Pf6N2E2_3877 0.43 -0.3 4,508,886 + Pf6N2E2_3877 0.43 -0.2 4,508,886 + Pf6N2E2_3877 0.43 -1.3 4,508,886 + Pf6N2E2_3877 0.43 +0.6 4,508,886 + Pf6N2E2_3877 0.43 -0.5 4,508,886 + Pf6N2E2_3877 0.43 -0.3 4,508,887 - Pf6N2E2_3877 0.43 -0.4 4,508,887 - Pf6N2E2_3877 0.43 -1.0 4,508,887 - Pf6N2E2_3877 0.43 -0.9 4,508,887 - Pf6N2E2_3877 0.43 +0.4 4,508,887 - Pf6N2E2_3877 0.43 -0.9 4,508,887 - Pf6N2E2_3877 0.43 +0.2 4,508,887 - Pf6N2E2_3877 0.43 -0.7 4,508,999 + Pf6N2E2_3877 0.47 -0.3 4,508,999 + Pf6N2E2_3877 0.47 -0.1 4,508,999 + Pf6N2E2_3877 0.47 -1.1 4,508,999 + Pf6N2E2_3877 0.47 +0.4 4,508,999 + Pf6N2E2_3877 0.47 -1.3 4,508,999 + Pf6N2E2_3877 0.47 +0.3 4,509,000 - Pf6N2E2_3877 0.47 -0.6 4,509,000 - Pf6N2E2_3877 0.47 -1.4 4,509,000 - Pf6N2E2_3877 0.47 -0.7 4,509,000 - Pf6N2E2_3877 0.47 +0.7 4,509,282 + Pf6N2E2_3877 0.56 -0.2 4,509,283 - Pf6N2E2_3877 0.56 +0.1 4,509,283 - Pf6N2E2_3877 0.56 +1.3 4,509,283 - Pf6N2E2_3877 0.56 +0.6 4,509,283 - Pf6N2E2_3877 0.56 -0.4 4,509,286 + Pf6N2E2_3877 0.57 +0.6 4,509,331 - Pf6N2E2_3877 0.58 +0.4 4,509,440 + Pf6N2E2_3877 0.62 -0.4 4,509,440 + Pf6N2E2_3877 0.62 -0.3 4,509,627 + Pf6N2E2_3877 0.68 +0.0 4,509,627 + Pf6N2E2_3877 0.68 -1.0 4,509,627 + Pf6N2E2_3877 0.68 +0.6 4,509,627 + Pf6N2E2_3877 0.68 +1.3 4,509,627 + Pf6N2E2_3877 0.68 +2.3 4,509,628 - Pf6N2E2_3877 0.68 -0.3 4,509,628 - Pf6N2E2_3877 0.68 +0.3 4,509,750 + Pf6N2E2_3877 0.73 -0.3 4,509,751 - Pf6N2E2_3877 0.73 +0.7 4,509,751 - Pf6N2E2_3877 0.73 -0.0 4,509,751 - Pf6N2E2_3877 0.73 -0.1 4,510,133 + Pf6N2E2_3877 0.86 -0.4 4,510,133 + Pf6N2E2_3877 0.86 -0.3 4,510,133 + Pf6N2E2_3877 0.86 -0.2 4,510,133 + Pf6N2E2_3877 0.86 -0.3 4,510,133 + Pf6N2E2_3877 0.86 -0.4 4,510,133 + Pf6N2E2_3877 0.86 -0.1 4,510,221 + Pf6N2E2_3877 0.89 -0.3 4,510,221 + Pf6N2E2_3877 0.89 -0.9 4,510,221 + Pf6N2E2_3877 0.89 -2.7 4,510,221 + Pf6N2E2_3877 0.89 +0.6 4,510,222 - Pf6N2E2_3877 0.89 -0.5 4,510,222 - Pf6N2E2_3877 0.89 -0.2 4,510,222 - Pf6N2E2_3877 0.89 +0.3 4,510,238 - Pf6N2E2_3877 0.90 +0.6 4,510,378 - -0.9 4,510,431 + +3.0 4,510,431 + -0.4 4,510,482 + -0.3 4,510,559 - +0.2 4,510,570 + +1.1 4,510,570 + +0.2 4,510,570 + +0.8 4,510,570 + -1.5 4,510,570 + -1.1 4,510,571 - -0.3 4,510,571 - +0.3 4,510,571 - +0.1 4,510,571 - +0.6 4,510,571 - +0.6 4,510,571 - -0.4 4,510,571 - -0.2 4,510,571 - +0.4 4,510,571 - -0.3 4,510,606 - +0.7 4,510,628 + +0.1 4,510,628 + +0.0 4,510,675 + +0.3 4,510,675 + -0.0 4,510,675 + -0.6 4,510,675 + -0.4 4,510,675 + -1.4 4,510,676 - -0.1 4,510,676 - -0.7 4,510,676 - +0.4 4,510,676 - -0.3 4,510,676 - +1.4 4,510,676 - -0.5 4,510,676 - +0.5 4,510,676 - +0.2 4,510,676 - +0.4 4,510,676 - -0.9 4,510,677 + -1.1 4,510,677 + +0.9 4,510,678 - +0.6 4,510,730 - +0.3 4,510,730 - +0.3 4,510,730 - -1.4 4,510,736 + +0.5 4,510,736 + +1.0 4,510,736 + +0.9 4,510,736 + +0.4 4,510,736 + -0.9 4,510,736 + +0.7 4,510,736 + -0.6 4,510,736 + -0.8 4,510,737 - +0.3 4,510,737 - -0.8 4,510,737 - +0.3 4,510,737 - -0.3 4,510,737 - -0.1 4,510,737 - +0.1 4,510,737 - -1.6 4,510,737 - -0.9 4,510,737 - -0.3 4,510,737 - -0.0 4,510,737 - -0.5 4,510,737 - +0.6 4,510,737 - -0.5 4,510,744 + +0.5
Or see this region's nucleotide sequence