Experiment: molybdate 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2937 and Pf6N2E2_2938 are separated by 116 nucleotides Pf6N2E2_2938 and Pf6N2E2_2939 are separated by 403 nucleotides
Pf6N2E2_2937 - Na+/H+ antiporter NhaA type, at 3,428,805 to 3,429,992
_2937
Pf6N2E2_2938 - Outer membrane lipoprotein, at 3,430,109 to 3,430,573
_2938
Pf6N2E2_2939 - Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5), at 3,430,977 to 3,431,624
_2939
Position (kb)
3430
3431 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3429.997 kb on + strand at 3429.997 kb on + strand at 3429.997 kb on + strand at 3429.998 kb on - strand at 3429.998 kb on - strand at 3429.998 kb on - strand at 3430.047 kb on + strand at 3430.047 kb on + strand at 3430.047 kb on + strand at 3430.047 kb on + strand at 3430.047 kb on + strand at 3430.047 kb on + strand at 3430.047 kb on + strand at 3430.047 kb on + strand at 3430.047 kb on + strand at 3430.047 kb on + strand at 3430.047 kb on + strand at 3430.047 kb on + strand at 3430.047 kb on + strand at 3430.048 kb on - strand at 3430.048 kb on - strand at 3430.048 kb on - strand at 3430.048 kb on - strand at 3430.048 kb on - strand at 3430.048 kb on - strand at 3430.079 kb on + strand at 3430.079 kb on + strand at 3430.080 kb on - strand at 3430.080 kb on - strand at 3430.080 kb on - strand at 3430.080 kb on - strand at 3430.080 kb on - strand at 3430.080 kb on - strand at 3430.111 kb on - strand at 3430.111 kb on - strand at 3430.130 kb on - strand at 3430.141 kb on + strand at 3430.142 kb on - strand at 3430.142 kb on - strand at 3430.147 kb on + strand at 3430.148 kb on - strand at 3430.200 kb on + strand, within Pf6N2E2_2938 at 3430.200 kb on + strand, within Pf6N2E2_2938 at 3430.201 kb on - strand, within Pf6N2E2_2938 at 3430.201 kb on - strand, within Pf6N2E2_2938 at 3430.201 kb on - strand, within Pf6N2E2_2938 at 3430.285 kb on + strand, within Pf6N2E2_2938 at 3430.286 kb on - strand, within Pf6N2E2_2938 at 3430.359 kb on - strand, within Pf6N2E2_2938 at 3430.359 kb on - strand, within Pf6N2E2_2938 at 3430.485 kb on + strand, within Pf6N2E2_2938 at 3430.485 kb on + strand, within Pf6N2E2_2938 at 3430.486 kb on - strand, within Pf6N2E2_2938 at 3430.567 kb on + strand at 3430.567 kb on + strand at 3430.567 kb on + strand at 3430.567 kb on + strand at 3430.567 kb on + strand at 3430.568 kb on - strand at 3430.568 kb on - strand at 3430.568 kb on - strand at 3430.568 kb on - strand at 3430.568 kb on - strand at 3430.568 kb on - strand at 3430.573 kb on + strand at 3430.574 kb on - strand at 3430.574 kb on - strand at 3430.574 kb on - strand at 3430.574 kb on - strand at 3430.700 kb on + strand at 3430.752 kb on - strand at 3430.752 kb on - strand at 3430.787 kb on + strand at 3430.787 kb on + strand at 3430.788 kb on - strand at 3430.788 kb on - strand at 3430.788 kb on - strand at 3430.805 kb on + strand at 3430.805 kb on + strand at 3430.805 kb on + strand at 3430.805 kb on + strand at 3430.806 kb on - strand at 3430.880 kb on + strand at 3430.880 kb on + strand at 3430.880 kb on + strand at 3430.880 kb on + strand at 3430.880 kb on + strand at 3430.880 kb on + strand at 3430.880 kb on + strand at 3430.880 kb on + strand at 3430.880 kb on + strand at 3430.881 kb on - strand at 3430.881 kb on - strand at 3430.881 kb on - strand at 3430.881 kb on - strand at 3430.978 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction molybdate 0.25 M remove 3,429,997 + +1.3 3,429,997 + +1.6 3,429,997 + +2.4 3,429,998 - +1.6 3,429,998 - +1.2 3,429,998 - +1.6 3,430,047 + +1.9 3,430,047 + +1.1 3,430,047 + +2.4 3,430,047 + +2.1 3,430,047 + -1.5 3,430,047 + +1.9 3,430,047 + +1.2 3,430,047 + +2.0 3,430,047 + -1.8 3,430,047 + +2.3 3,430,047 + +0.9 3,430,047 + +0.9 3,430,047 + +2.5 3,430,048 - +2.3 3,430,048 - -1.6 3,430,048 - +2.3 3,430,048 - +0.1 3,430,048 - +0.6 3,430,048 - +1.2 3,430,079 + +1.4 3,430,079 + +1.2 3,430,080 - -0.5 3,430,080 - +1.2 3,430,080 - +1.2 3,430,080 - +1.5 3,430,080 - +2.0 3,430,080 - -1.1 3,430,111 - +0.9 3,430,111 - +1.9 3,430,130 - -1.4 3,430,141 + -0.7 3,430,142 - -2.0 3,430,142 - +0.5 3,430,147 + -2.0 3,430,148 - -1.7 3,430,200 + Pf6N2E2_2938 0.20 -1.9 3,430,200 + Pf6N2E2_2938 0.20 -2.5 3,430,201 - Pf6N2E2_2938 0.20 -3.1 3,430,201 - Pf6N2E2_2938 0.20 +0.9 3,430,201 - Pf6N2E2_2938 0.20 -0.8 3,430,285 + Pf6N2E2_2938 0.38 -0.5 3,430,286 - Pf6N2E2_2938 0.38 -2.1 3,430,359 - Pf6N2E2_2938 0.54 -1.9 3,430,359 - Pf6N2E2_2938 0.54 +0.3 3,430,485 + Pf6N2E2_2938 0.81 +1.0 3,430,485 + Pf6N2E2_2938 0.81 -1.9 3,430,486 - Pf6N2E2_2938 0.81 -0.5 3,430,567 + +0.5 3,430,567 + -1.3 3,430,567 + -0.5 3,430,567 + -0.5 3,430,567 + +0.3 3,430,568 - -0.9 3,430,568 - -0.8 3,430,568 - -0.3 3,430,568 - -2.0 3,430,568 - -1.4 3,430,568 - -2.9 3,430,573 + -1.2 3,430,574 - -2.0 3,430,574 - +0.5 3,430,574 - -2.5 3,430,574 - -0.7 3,430,700 + +1.3 3,430,752 - -2.6 3,430,752 - -0.9 3,430,787 + +1.5 3,430,787 + +1.3 3,430,788 - -1.2 3,430,788 - -0.8 3,430,788 - +0.3 3,430,805 + +1.1 3,430,805 + +1.4 3,430,805 + +1.7 3,430,805 + +1.3 3,430,806 - -0.8 3,430,880 + -0.0 3,430,880 + +0.8 3,430,880 + +0.5 3,430,880 + +0.9 3,430,880 + +0.1 3,430,880 + +0.3 3,430,880 + +0.9 3,430,880 + +2.1 3,430,880 + +0.4 3,430,881 - -1.8 3,430,881 - -0.0 3,430,881 - +1.4 3,430,881 - +1.0 3,430,978 + +0.5
Or see this region's nucleotide sequence