Experiment: molybdate 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2753 and Pf6N2E2_2754 are separated by 234 nucleotides Pf6N2E2_2754 and Pf6N2E2_2755 are separated by 12 nucleotides Pf6N2E2_2755 and Pf6N2E2_2756 are separated by 31 nucleotides
Pf6N2E2_2753 - HtrA protease/chaperone protein, at 3,244,990 to 3,246,420
_2753
Pf6N2E2_2754 - Sigma factor RpoE negative regulatory protein RseB precursor, at 3,246,655 to 3,247,602
_2754
Pf6N2E2_2755 - Sigma factor RpoE negative regulatory protein RseA, at 3,247,615 to 3,248,202
_2755
Pf6N2E2_2756 - RNA polymerase sigma-H factor AlgT, at 3,248,234 to 3,248,815
_2756
Position (kb)
3246
3247
3248 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3245.709 kb on - strand, within Pf6N2E2_2753 at 3245.811 kb on - strand, within Pf6N2E2_2753 at 3246.044 kb on - strand, within Pf6N2E2_2753 at 3246.093 kb on - strand, within Pf6N2E2_2753 at 3246.109 kb on - strand, within Pf6N2E2_2753 at 3246.538 kb on - strand at 3246.873 kb on - strand, within Pf6N2E2_2754 at 3246.873 kb on - strand, within Pf6N2E2_2754 at 3247.303 kb on - strand, within Pf6N2E2_2754 at 3247.344 kb on + strand, within Pf6N2E2_2754 at 3247.344 kb on + strand, within Pf6N2E2_2754 at 3247.438 kb on - strand, within Pf6N2E2_2754 at 3247.592 kb on - strand at 3247.592 kb on - strand at 3247.703 kb on + strand, within Pf6N2E2_2755 at 3247.704 kb on - strand, within Pf6N2E2_2755 at 3248.236 kb on - strand at 3248.236 kb on - strand at 3248.312 kb on + strand, within Pf6N2E2_2756 at 3248.313 kb on - strand, within Pf6N2E2_2756 at 3248.347 kb on - strand, within Pf6N2E2_2756 at 3248.369 kb on + strand, within Pf6N2E2_2756 at 3248.376 kb on - strand, within Pf6N2E2_2756 at 3248.497 kb on - strand, within Pf6N2E2_2756 at 3248.497 kb on - strand, within Pf6N2E2_2756 at 3248.497 kb on - strand, within Pf6N2E2_2756 at 3248.497 kb on - strand, within Pf6N2E2_2756 at 3248.497 kb on - strand, within Pf6N2E2_2756 at 3248.497 kb on - strand, within Pf6N2E2_2756 at 3248.497 kb on - strand, within Pf6N2E2_2756 at 3248.497 kb on - strand, within Pf6N2E2_2756 at 3248.497 kb on - strand, within Pf6N2E2_2756 at 3248.497 kb on - strand, within Pf6N2E2_2756 at 3248.520 kb on - strand, within Pf6N2E2_2756 at 3248.520 kb on - strand, within Pf6N2E2_2756 at 3248.520 kb on - strand, within Pf6N2E2_2756 at 3248.520 kb on - strand, within Pf6N2E2_2756 at 3248.602 kb on - strand, within Pf6N2E2_2756
Per-strain Table
Position Strand Gene LocusTag Fraction molybdate 0.25 M remove 3,245,709 - Pf6N2E2_2753 0.50 -0.5 3,245,811 - Pf6N2E2_2753 0.57 +1.8 3,246,044 - Pf6N2E2_2753 0.74 -0.8 3,246,093 - Pf6N2E2_2753 0.77 -2.2 3,246,109 - Pf6N2E2_2753 0.78 +0.2 3,246,538 - +0.0 3,246,873 - Pf6N2E2_2754 0.23 -3.2 3,246,873 - Pf6N2E2_2754 0.23 -1.8 3,247,303 - Pf6N2E2_2754 0.68 -3.0 3,247,344 + Pf6N2E2_2754 0.73 -1.8 3,247,344 + Pf6N2E2_2754 0.73 -1.3 3,247,438 - Pf6N2E2_2754 0.83 -3.0 3,247,592 - -3.3 3,247,592 - -2.4 3,247,703 + Pf6N2E2_2755 0.15 -1.2 3,247,704 - Pf6N2E2_2755 0.15 -2.8 3,248,236 - -0.9 3,248,236 - -1.2 3,248,312 + Pf6N2E2_2756 0.13 +0.8 3,248,313 - Pf6N2E2_2756 0.14 +0.9 3,248,347 - Pf6N2E2_2756 0.19 +2.0 3,248,369 + Pf6N2E2_2756 0.23 -0.5 3,248,376 - Pf6N2E2_2756 0.24 -0.8 3,248,497 - Pf6N2E2_2756 0.45 +1.2 3,248,497 - Pf6N2E2_2756 0.45 -1.2 3,248,497 - Pf6N2E2_2756 0.45 -0.9 3,248,497 - Pf6N2E2_2756 0.45 +0.1 3,248,497 - Pf6N2E2_2756 0.45 +0.2 3,248,497 - Pf6N2E2_2756 0.45 +1.3 3,248,497 - Pf6N2E2_2756 0.45 +2.2 3,248,497 - Pf6N2E2_2756 0.45 -1.0 3,248,497 - Pf6N2E2_2756 0.45 -1.1 3,248,497 - Pf6N2E2_2756 0.45 +0.1 3,248,520 - Pf6N2E2_2756 0.49 -0.7 3,248,520 - Pf6N2E2_2756 0.49 +0.8 3,248,520 - Pf6N2E2_2756 0.49 -0.2 3,248,520 - Pf6N2E2_2756 0.49 -0.5 3,248,602 - Pf6N2E2_2756 0.63 -0.0
Or see this region's nucleotide sequence