Experiment: molybdate 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_6112 and Pf6N2E2_2744 are separated by 83 nucleotides Pf6N2E2_2744 and Pf6N2E2_2745 are separated by 27 nucleotides Pf6N2E2_2745 and Pf6N2E2_2746 are separated by 4 nucleotides
Pf6N2E2_6112 - tRNA-Pseudo-CGA, at 3,236,880 to 3,236,966
_6112
Pf6N2E2_2744 - Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6), at 3,237,050 to 3,237,763
_2744
Pf6N2E2_2745 - Metal-dependent hydrolases of the beta-lactamase superfamily I, at 3,237,791 to 3,238,549
_2745
Pf6N2E2_2746 - Outer membrane protein NlpB, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and YfgL); Lipoprotein-34 precursor, at 3,238,554 to 3,239,669
_2746
Position (kb)
3237
3238
3239 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3237.032 kb on - strand at 3237.051 kb on + strand at 3237.052 kb on - strand at 3237.781 kb on - strand at 3237.781 kb on - strand at 3237.781 kb on - strand at 3237.781 kb on - strand at 3237.781 kb on - strand at 3237.781 kb on - strand at 3237.785 kb on - strand at 3237.800 kb on - strand at 3238.030 kb on - strand, within Pf6N2E2_2745 at 3238.030 kb on - strand, within Pf6N2E2_2745 at 3238.030 kb on - strand, within Pf6N2E2_2745 at 3238.039 kb on - strand, within Pf6N2E2_2745 at 3238.039 kb on - strand, within Pf6N2E2_2745 at 3238.102 kb on - strand, within Pf6N2E2_2745 at 3238.102 kb on - strand, within Pf6N2E2_2745 at 3238.180 kb on - strand, within Pf6N2E2_2745 at 3238.180 kb on - strand, within Pf6N2E2_2745 at 3238.180 kb on - strand, within Pf6N2E2_2745 at 3238.180 kb on - strand, within Pf6N2E2_2745 at 3238.180 kb on - strand, within Pf6N2E2_2745 at 3238.180 kb on - strand, within Pf6N2E2_2745 at 3238.180 kb on - strand, within Pf6N2E2_2745 at 3238.180 kb on - strand, within Pf6N2E2_2745 at 3238.180 kb on - strand, within Pf6N2E2_2745 at 3238.180 kb on - strand, within Pf6N2E2_2745 at 3238.180 kb on - strand, within Pf6N2E2_2745 at 3238.483 kb on - strand at 3238.483 kb on - strand at 3238.483 kb on - strand at 3238.483 kb on - strand at 3238.483 kb on - strand at 3238.483 kb on - strand at 3238.483 kb on - strand at 3238.483 kb on - strand at 3238.483 kb on - strand at 3238.483 kb on - strand at 3238.790 kb on - strand, within Pf6N2E2_2746 at 3238.790 kb on - strand, within Pf6N2E2_2746 at 3238.790 kb on - strand, within Pf6N2E2_2746 at 3238.790 kb on - strand, within Pf6N2E2_2746 at 3238.790 kb on - strand, within Pf6N2E2_2746 at 3238.790 kb on - strand, within Pf6N2E2_2746 at 3238.793 kb on - strand, within Pf6N2E2_2746 at 3238.793 kb on - strand, within Pf6N2E2_2746 at 3238.793 kb on - strand, within Pf6N2E2_2746 at 3238.793 kb on - strand, within Pf6N2E2_2746 at 3238.793 kb on - strand, within Pf6N2E2_2746 at 3238.793 kb on - strand, within Pf6N2E2_2746 at 3238.793 kb on - strand, within Pf6N2E2_2746 at 3239.114 kb on - strand, within Pf6N2E2_2746 at 3239.114 kb on - strand, within Pf6N2E2_2746 at 3239.114 kb on - strand, within Pf6N2E2_2746 at 3239.114 kb on - strand, within Pf6N2E2_2746 at 3239.390 kb on - strand, within Pf6N2E2_2746 at 3239.441 kb on - strand, within Pf6N2E2_2746 at 3239.441 kb on - strand, within Pf6N2E2_2746
Per-strain Table
Position Strand Gene LocusTag Fraction molybdate 0.25 M remove 3,237,032 - -0.1 3,237,051 + -0.1 3,237,052 - +0.3 3,237,781 - +0.0 3,237,781 - -1.1 3,237,781 - -0.6 3,237,781 - -1.1 3,237,781 - +0.1 3,237,781 - -1.1 3,237,785 - -1.0 3,237,800 - -1.0 3,238,030 - Pf6N2E2_2745 0.31 -0.2 3,238,030 - Pf6N2E2_2745 0.31 +1.3 3,238,030 - Pf6N2E2_2745 0.31 -0.7 3,238,039 - Pf6N2E2_2745 0.33 +0.5 3,238,039 - Pf6N2E2_2745 0.33 -0.9 3,238,102 - Pf6N2E2_2745 0.41 -0.9 3,238,102 - Pf6N2E2_2745 0.41 -1.0 3,238,180 - Pf6N2E2_2745 0.51 -0.5 3,238,180 - Pf6N2E2_2745 0.51 -0.1 3,238,180 - Pf6N2E2_2745 0.51 -0.8 3,238,180 - Pf6N2E2_2745 0.51 -0.3 3,238,180 - Pf6N2E2_2745 0.51 -0.7 3,238,180 - Pf6N2E2_2745 0.51 +0.4 3,238,180 - Pf6N2E2_2745 0.51 -0.5 3,238,180 - Pf6N2E2_2745 0.51 -1.3 3,238,180 - Pf6N2E2_2745 0.51 -0.9 3,238,180 - Pf6N2E2_2745 0.51 -0.1 3,238,180 - Pf6N2E2_2745 0.51 -1.3 3,238,483 - +0.5 3,238,483 - +0.7 3,238,483 - -0.2 3,238,483 - -1.0 3,238,483 - -0.2 3,238,483 - -0.8 3,238,483 - -0.6 3,238,483 - -0.1 3,238,483 - -1.3 3,238,483 - -0.4 3,238,790 - Pf6N2E2_2746 0.21 -0.6 3,238,790 - Pf6N2E2_2746 0.21 -1.0 3,238,790 - Pf6N2E2_2746 0.21 +0.1 3,238,790 - Pf6N2E2_2746 0.21 +0.8 3,238,790 - Pf6N2E2_2746 0.21 -1.2 3,238,790 - Pf6N2E2_2746 0.21 +0.8 3,238,793 - Pf6N2E2_2746 0.21 -0.3 3,238,793 - Pf6N2E2_2746 0.21 -0.7 3,238,793 - Pf6N2E2_2746 0.21 +0.2 3,238,793 - Pf6N2E2_2746 0.21 -1.2 3,238,793 - Pf6N2E2_2746 0.21 +0.8 3,238,793 - Pf6N2E2_2746 0.21 -2.2 3,238,793 - Pf6N2E2_2746 0.21 +0.6 3,239,114 - Pf6N2E2_2746 0.50 -1.2 3,239,114 - Pf6N2E2_2746 0.50 -0.8 3,239,114 - Pf6N2E2_2746 0.50 -0.5 3,239,114 - Pf6N2E2_2746 0.50 +0.7 3,239,390 - Pf6N2E2_2746 0.75 +2.1 3,239,441 - Pf6N2E2_2746 0.79 -2.3 3,239,441 - Pf6N2E2_2746 0.79 -1.7
Or see this region's nucleotide sequence