Experiment: molybdate 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2673 and Pf6N2E2_2674 are separated by 366 nucleotides Pf6N2E2_2674 and Pf6N2E2_2675 are separated by 245 nucleotides Pf6N2E2_2675 and Pf6N2E2_2676 are separated by 151 nucleotides Pf6N2E2_2676 and Pf6N2E2_2677 overlap by 72 nucleotides
Pf6N2E2_2673 - Cytochrome c family protein, at 3,160,050 to 3,162,554
_2673
Pf6N2E2_2674 - FIG00953856: hypothetical protein, at 3,162,921 to 3,163,196
_2674
Pf6N2E2_2675 - ATP-dependent RNA helicase SrmB, at 3,163,442 to 3,164,788
_2675
Pf6N2E2_2676 - hypothetical protein, at 3,164,940 to 3,165,053
_2676
Pf6N2E2_2677 - Small-conductance mechanosensitive channel, at 3,164,982 to 3,166,280
_2677
Position (kb)
3163
3164
3165 Strain fitness (log2 ratio)
-2
-1
0
1 at 3162.554 kb on + strand at 3162.598 kb on - strand at 3162.613 kb on + strand at 3162.614 kb on - strand at 3162.617 kb on + strand at 3162.683 kb on + strand at 3162.683 kb on + strand at 3162.684 kb on - strand at 3162.684 kb on - strand at 3162.684 kb on - strand at 3162.697 kb on + strand at 3162.698 kb on - strand at 3162.713 kb on + strand at 3162.713 kb on + strand at 3162.713 kb on + strand at 3162.713 kb on + strand at 3162.713 kb on + strand at 3162.713 kb on + strand at 3162.714 kb on - strand at 3162.751 kb on + strand at 3162.752 kb on - strand at 3162.780 kb on - strand at 3162.780 kb on - strand at 3162.792 kb on - strand at 3162.907 kb on + strand at 3162.908 kb on - strand at 3163.151 kb on + strand, within Pf6N2E2_2674 at 3163.204 kb on - strand at 3163.292 kb on + strand at 3163.293 kb on - strand at 3163.293 kb on - strand at 3163.373 kb on + strand at 3163.373 kb on + strand at 3163.373 kb on + strand at 3163.373 kb on + strand at 3163.373 kb on + strand at 3163.374 kb on - strand at 3163.393 kb on - strand at 3163.657 kb on - strand, within Pf6N2E2_2675 at 3164.827 kb on - strand at 3164.866 kb on - strand at 3164.932 kb on + strand at 3164.932 kb on + strand at 3164.932 kb on + strand at 3164.942 kb on - strand at 3164.964 kb on - strand, within Pf6N2E2_2676 at 3164.964 kb on - strand, within Pf6N2E2_2676 at 3165.366 kb on + strand, within Pf6N2E2_2677 at 3165.366 kb on + strand, within Pf6N2E2_2677 at 3165.408 kb on + strand, within Pf6N2E2_2677 at 3165.408 kb on + strand, within Pf6N2E2_2677 at 3165.408 kb on + strand, within Pf6N2E2_2677 at 3165.408 kb on + strand, within Pf6N2E2_2677 at 3165.408 kb on + strand, within Pf6N2E2_2677 at 3165.408 kb on + strand, within Pf6N2E2_2677 at 3165.435 kb on + strand, within Pf6N2E2_2677 at 3165.435 kb on + strand, within Pf6N2E2_2677 at 3165.435 kb on + strand, within Pf6N2E2_2677 at 3165.435 kb on + strand, within Pf6N2E2_2677 at 3165.435 kb on + strand, within Pf6N2E2_2677 at 3165.435 kb on + strand, within Pf6N2E2_2677 at 3165.435 kb on + strand, within Pf6N2E2_2677 at 3165.435 kb on + strand, within Pf6N2E2_2677 at 3165.435 kb on + strand, within Pf6N2E2_2677 at 3165.435 kb on + strand, within Pf6N2E2_2677 at 3165.435 kb on + strand, within Pf6N2E2_2677 at 3165.435 kb on + strand, within Pf6N2E2_2677 at 3165.436 kb on - strand, within Pf6N2E2_2677 at 3165.436 kb on - strand, within Pf6N2E2_2677 at 3165.436 kb on - strand, within Pf6N2E2_2677 at 3165.436 kb on - strand, within Pf6N2E2_2677 at 3165.436 kb on - strand, within Pf6N2E2_2677 at 3165.436 kb on - strand, within Pf6N2E2_2677 at 3165.436 kb on - strand, within Pf6N2E2_2677 at 3165.439 kb on + strand, within Pf6N2E2_2677 at 3165.439 kb on + strand, within Pf6N2E2_2677 at 3165.440 kb on - strand, within Pf6N2E2_2677 at 3165.537 kb on + strand, within Pf6N2E2_2677 at 3165.538 kb on - strand, within Pf6N2E2_2677 at 3165.538 kb on - strand, within Pf6N2E2_2677
Per-strain Table
Position Strand Gene LocusTag Fraction molybdate 0.25 M remove 3,162,554 + -0.8 3,162,598 - +0.6 3,162,613 + -2.4 3,162,614 - -0.2 3,162,617 + -0.9 3,162,683 + +0.3 3,162,683 + -0.5 3,162,684 - +0.4 3,162,684 - -0.8 3,162,684 - -0.0 3,162,697 + +1.2 3,162,698 - -0.5 3,162,713 + +0.3 3,162,713 + -1.2 3,162,713 + -1.4 3,162,713 + +1.2 3,162,713 + -1.5 3,162,713 + +1.1 3,162,714 - +0.5 3,162,751 + +0.3 3,162,752 - -1.4 3,162,780 - -0.6 3,162,780 - -0.3 3,162,792 - -1.2 3,162,907 + +0.9 3,162,908 - -0.4 3,163,151 + Pf6N2E2_2674 0.83 -0.1 3,163,204 - +0.6 3,163,292 + +0.3 3,163,293 - +0.0 3,163,293 - -2.0 3,163,373 + +0.4 3,163,373 + +0.5 3,163,373 + +0.6 3,163,373 + +0.7 3,163,373 + +0.3 3,163,374 - -0.1 3,163,393 - -0.5 3,163,657 - Pf6N2E2_2675 0.16 -1.2 3,164,827 - -0.2 3,164,866 - +0.9 3,164,932 + +0.5 3,164,932 + +0.2 3,164,932 + -0.5 3,164,942 - -1.0 3,164,964 - Pf6N2E2_2676 0.21 -1.8 3,164,964 - Pf6N2E2_2676 0.21 -0.4 3,165,366 + Pf6N2E2_2677 0.30 -0.3 3,165,366 + Pf6N2E2_2677 0.30 +0.2 3,165,408 + Pf6N2E2_2677 0.33 -1.5 3,165,408 + Pf6N2E2_2677 0.33 +0.1 3,165,408 + Pf6N2E2_2677 0.33 +0.3 3,165,408 + Pf6N2E2_2677 0.33 +0.6 3,165,408 + Pf6N2E2_2677 0.33 -0.9 3,165,408 + Pf6N2E2_2677 0.33 -0.0 3,165,435 + Pf6N2E2_2677 0.35 +0.0 3,165,435 + Pf6N2E2_2677 0.35 -1.3 3,165,435 + Pf6N2E2_2677 0.35 +0.2 3,165,435 + Pf6N2E2_2677 0.35 -2.3 3,165,435 + Pf6N2E2_2677 0.35 -1.1 3,165,435 + Pf6N2E2_2677 0.35 -1.4 3,165,435 + Pf6N2E2_2677 0.35 -0.5 3,165,435 + Pf6N2E2_2677 0.35 -1.2 3,165,435 + Pf6N2E2_2677 0.35 -0.6 3,165,435 + Pf6N2E2_2677 0.35 -0.0 3,165,435 + Pf6N2E2_2677 0.35 -0.1 3,165,435 + Pf6N2E2_2677 0.35 -0.1 3,165,436 - Pf6N2E2_2677 0.35 +1.2 3,165,436 - Pf6N2E2_2677 0.35 +0.3 3,165,436 - Pf6N2E2_2677 0.35 +0.8 3,165,436 - Pf6N2E2_2677 0.35 -1.2 3,165,436 - Pf6N2E2_2677 0.35 +0.3 3,165,436 - Pf6N2E2_2677 0.35 +0.4 3,165,436 - Pf6N2E2_2677 0.35 -0.1 3,165,439 + Pf6N2E2_2677 0.35 -0.8 3,165,439 + Pf6N2E2_2677 0.35 -1.6 3,165,440 - Pf6N2E2_2677 0.35 +0.8 3,165,537 + Pf6N2E2_2677 0.43 -0.9 3,165,538 - Pf6N2E2_2677 0.43 -0.0 3,165,538 - Pf6N2E2_2677 0.43 -0.2
Or see this region's nucleotide sequence