Experiment: molybdate 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2506 and Pf6N2E2_2507 are separated by 42 nucleotides Pf6N2E2_2507 and Pf6N2E2_2508 are separated by 54 nucleotides Pf6N2E2_2508 and Pf6N2E2_2509 are separated by 182 nucleotides
Pf6N2E2_2506 - nucleotide sugar epimerase/dehydratase WbpM, at 2,957,944 to 2,960,010
_2506
Pf6N2E2_2507 - Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase (EC 2.7.8.-), at 2,960,053 to 2,960,700
_2507
Pf6N2E2_2508 - hypothetical protein, at 2,960,755 to 2,960,886
_2508
Pf6N2E2_2509 - UDP-glucose 4-epimerase (EC 5.1.3.2), at 2,961,069 to 2,961,572
_2509
Position (kb)
2960
2961 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2959.056 kb on + strand, within Pf6N2E2_2506 at 2959.056 kb on + strand, within Pf6N2E2_2506 at 2959.056 kb on + strand, within Pf6N2E2_2506 at 2959.056 kb on + strand, within Pf6N2E2_2506 at 2959.056 kb on + strand, within Pf6N2E2_2506 at 2959.056 kb on + strand, within Pf6N2E2_2506 at 2959.056 kb on + strand, within Pf6N2E2_2506 at 2959.056 kb on + strand, within Pf6N2E2_2506 at 2959.057 kb on - strand, within Pf6N2E2_2506 at 2959.057 kb on - strand, within Pf6N2E2_2506 at 2959.057 kb on - strand, within Pf6N2E2_2506 at 2959.057 kb on - strand, within Pf6N2E2_2506 at 2959.057 kb on - strand, within Pf6N2E2_2506 at 2959.057 kb on - strand, within Pf6N2E2_2506 at 2959.057 kb on - strand, within Pf6N2E2_2506 at 2959.057 kb on - strand, within Pf6N2E2_2506 at 2959.057 kb on - strand, within Pf6N2E2_2506 at 2959.057 kb on - strand, within Pf6N2E2_2506 at 2959.210 kb on + strand, within Pf6N2E2_2506 at 2959.219 kb on + strand, within Pf6N2E2_2506 at 2959.228 kb on - strand, within Pf6N2E2_2506 at 2959.302 kb on + strand, within Pf6N2E2_2506 at 2959.303 kb on - strand, within Pf6N2E2_2506 at 2959.316 kb on + strand, within Pf6N2E2_2506 at 2959.316 kb on + strand, within Pf6N2E2_2506 at 2959.317 kb on - strand, within Pf6N2E2_2506 at 2959.317 kb on - strand, within Pf6N2E2_2506 at 2959.350 kb on + strand, within Pf6N2E2_2506 at 2959.523 kb on + strand, within Pf6N2E2_2506 at 2959.524 kb on - strand, within Pf6N2E2_2506 at 2959.612 kb on - strand, within Pf6N2E2_2506 at 2959.612 kb on - strand, within Pf6N2E2_2506 at 2959.623 kb on - strand, within Pf6N2E2_2506 at 2959.628 kb on + strand, within Pf6N2E2_2506 at 2959.629 kb on - strand, within Pf6N2E2_2506 at 2959.645 kb on + strand, within Pf6N2E2_2506 at 2959.681 kb on - strand, within Pf6N2E2_2506 at 2959.681 kb on - strand, within Pf6N2E2_2506 at 2959.681 kb on - strand, within Pf6N2E2_2506 at 2959.681 kb on - strand, within Pf6N2E2_2506 at 2959.704 kb on - strand, within Pf6N2E2_2506 at 2959.722 kb on - strand, within Pf6N2E2_2506 at 2959.808 kb on - strand at 2959.808 kb on - strand at 2959.808 kb on - strand at 2959.808 kb on - strand at 2959.808 kb on - strand at 2959.808 kb on - strand at 2959.815 kb on + strand at 2959.815 kb on + strand at 2959.816 kb on - strand at 2959.820 kb on - strand at 2959.859 kb on - strand at 2959.859 kb on - strand at 2959.859 kb on - strand at 2959.859 kb on - strand at 2959.894 kb on - strand at 2959.927 kb on + strand at 2959.928 kb on - strand at 2959.928 kb on - strand at 2959.928 kb on - strand at 2959.928 kb on - strand at 2959.928 kb on - strand at 2959.928 kb on - strand at 2959.928 kb on - strand at 2959.928 kb on - strand at 2959.933 kb on - strand at 2959.939 kb on - strand at 2959.939 kb on - strand at 2959.939 kb on - strand at 2959.942 kb on + strand at 2959.943 kb on - strand at 2959.943 kb on - strand at 2959.943 kb on - strand at 2959.943 kb on - strand at 2959.943 kb on - strand at 2959.943 kb on - strand at 2959.943 kb on - strand at 2959.989 kb on - strand at 2959.989 kb on - strand at 2959.989 kb on - strand at 2959.989 kb on - strand at 2960.056 kb on + strand at 2960.056 kb on + strand at 2960.056 kb on + strand at 2960.057 kb on - strand at 2960.098 kb on + strand at 2960.185 kb on + strand, within Pf6N2E2_2507 at 2960.186 kb on - strand, within Pf6N2E2_2507 at 2960.186 kb on - strand, within Pf6N2E2_2507 at 2960.191 kb on - strand, within Pf6N2E2_2507 at 2960.252 kb on + strand, within Pf6N2E2_2507 at 2960.253 kb on - strand, within Pf6N2E2_2507 at 2960.276 kb on + strand, within Pf6N2E2_2507 at 2960.277 kb on - strand, within Pf6N2E2_2507 at 2960.279 kb on - strand, within Pf6N2E2_2507 at 2960.279 kb on - strand, within Pf6N2E2_2507 at 2960.363 kb on - strand, within Pf6N2E2_2507 at 2960.363 kb on - strand, within Pf6N2E2_2507 at 2960.363 kb on - strand, within Pf6N2E2_2507 at 2960.452 kb on - strand, within Pf6N2E2_2507 at 2960.452 kb on - strand, within Pf6N2E2_2507 at 2960.520 kb on + strand, within Pf6N2E2_2507 at 2960.521 kb on - strand, within Pf6N2E2_2507 at 2960.621 kb on + strand, within Pf6N2E2_2507 at 2960.660 kb on - strand at 2960.722 kb on + strand at 2960.723 kb on - strand at 2960.732 kb on - strand at 2960.732 kb on - strand at 2960.782 kb on + strand, within Pf6N2E2_2508 at 2960.782 kb on + strand, within Pf6N2E2_2508 at 2960.782 kb on + strand at 2960.782 kb on + strand, within Pf6N2E2_2508 at 2960.783 kb on - strand, within Pf6N2E2_2508 at 2960.783 kb on - strand, within Pf6N2E2_2508 at 2960.783 kb on - strand, within Pf6N2E2_2508 at 2960.783 kb on - strand, within Pf6N2E2_2508 at 2960.783 kb on - strand, within Pf6N2E2_2508 at 2960.783 kb on - strand, within Pf6N2E2_2508 at 2960.959 kb on - strand at 2960.959 kb on - strand at 2960.988 kb on + strand at 2960.999 kb on + strand at 2961.000 kb on - strand at 2961.000 kb on - strand at 2961.023 kb on - strand at 2961.113 kb on + strand at 2961.114 kb on - strand at 2961.217 kb on - strand, within Pf6N2E2_2509 at 2961.342 kb on - strand, within Pf6N2E2_2509 at 2961.632 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction molybdate 0.25 M remove 2,959,056 + Pf6N2E2_2506 0.54 -0.9 2,959,056 + Pf6N2E2_2506 0.54 -1.2 2,959,056 + Pf6N2E2_2506 0.54 -2.7 2,959,056 + Pf6N2E2_2506 0.54 -1.6 2,959,056 + Pf6N2E2_2506 0.54 -1.8 2,959,056 + Pf6N2E2_2506 0.54 -0.2 2,959,056 + Pf6N2E2_2506 0.54 -2.7 2,959,056 + Pf6N2E2_2506 0.54 -1.7 2,959,057 - Pf6N2E2_2506 0.54 -2.7 2,959,057 - Pf6N2E2_2506 0.54 -1.0 2,959,057 - Pf6N2E2_2506 0.54 -1.5 2,959,057 - Pf6N2E2_2506 0.54 -0.4 2,959,057 - Pf6N2E2_2506 0.54 -2.6 2,959,057 - Pf6N2E2_2506 0.54 -2.4 2,959,057 - Pf6N2E2_2506 0.54 -2.5 2,959,057 - Pf6N2E2_2506 0.54 -0.8 2,959,057 - Pf6N2E2_2506 0.54 -2.0 2,959,057 - Pf6N2E2_2506 0.54 -1.5 2,959,210 + Pf6N2E2_2506 0.61 -2.1 2,959,219 + Pf6N2E2_2506 0.62 +3.0 2,959,228 - Pf6N2E2_2506 0.62 -1.5 2,959,302 + Pf6N2E2_2506 0.66 -2.2 2,959,303 - Pf6N2E2_2506 0.66 -0.7 2,959,316 + Pf6N2E2_2506 0.66 -0.9 2,959,316 + Pf6N2E2_2506 0.66 -0.7 2,959,317 - Pf6N2E2_2506 0.66 +0.1 2,959,317 - Pf6N2E2_2506 0.66 -2.6 2,959,350 + Pf6N2E2_2506 0.68 -1.9 2,959,523 + Pf6N2E2_2506 0.76 -0.3 2,959,524 - Pf6N2E2_2506 0.76 -2.0 2,959,612 - Pf6N2E2_2506 0.81 -2.0 2,959,612 - Pf6N2E2_2506 0.81 -0.5 2,959,623 - Pf6N2E2_2506 0.81 -1.6 2,959,628 + Pf6N2E2_2506 0.81 -0.1 2,959,629 - Pf6N2E2_2506 0.82 -0.9 2,959,645 + Pf6N2E2_2506 0.82 -2.1 2,959,681 - Pf6N2E2_2506 0.84 -1.3 2,959,681 - Pf6N2E2_2506 0.84 -1.1 2,959,681 - Pf6N2E2_2506 0.84 -3.5 2,959,681 - Pf6N2E2_2506 0.84 -2.9 2,959,704 - Pf6N2E2_2506 0.85 -1.1 2,959,722 - Pf6N2E2_2506 0.86 -0.9 2,959,808 - -1.7 2,959,808 - -1.8 2,959,808 - -2.0 2,959,808 - -1.6 2,959,808 - -0.3 2,959,808 - -1.5 2,959,815 + +0.7 2,959,815 + -2.0 2,959,816 - -1.5 2,959,820 - -0.1 2,959,859 - -2.5 2,959,859 - -3.2 2,959,859 - -0.7 2,959,859 - -2.5 2,959,894 - -1.1 2,959,927 + +2.7 2,959,928 - -1.0 2,959,928 - -2.0 2,959,928 - -0.8 2,959,928 - +0.4 2,959,928 - -0.7 2,959,928 - -3.4 2,959,928 - -2.6 2,959,928 - -2.8 2,959,933 - -1.5 2,959,939 - -0.8 2,959,939 - -1.2 2,959,939 - -0.5 2,959,942 + -2.1 2,959,943 - -1.0 2,959,943 - -0.6 2,959,943 - +0.1 2,959,943 - -0.8 2,959,943 - -2.3 2,959,943 - -2.7 2,959,943 - -0.2 2,959,989 - +0.4 2,959,989 - +1.0 2,959,989 - +0.1 2,959,989 - +1.0 2,960,056 + -1.8 2,960,056 + -1.8 2,960,056 + -2.4 2,960,057 - -1.6 2,960,098 + -0.2 2,960,185 + Pf6N2E2_2507 0.20 -0.9 2,960,186 - Pf6N2E2_2507 0.21 -2.2 2,960,186 - Pf6N2E2_2507 0.21 -2.1 2,960,191 - Pf6N2E2_2507 0.21 +1.1 2,960,252 + Pf6N2E2_2507 0.31 +0.4 2,960,253 - Pf6N2E2_2507 0.31 -1.3 2,960,276 + Pf6N2E2_2507 0.34 -1.2 2,960,277 - Pf6N2E2_2507 0.35 -0.3 2,960,279 - Pf6N2E2_2507 0.35 -0.3 2,960,279 - Pf6N2E2_2507 0.35 -0.8 2,960,363 - Pf6N2E2_2507 0.48 -0.3 2,960,363 - Pf6N2E2_2507 0.48 +0.1 2,960,363 - Pf6N2E2_2507 0.48 -0.9 2,960,452 - Pf6N2E2_2507 0.62 +0.8 2,960,452 - Pf6N2E2_2507 0.62 -2.8 2,960,520 + Pf6N2E2_2507 0.72 -2.2 2,960,521 - Pf6N2E2_2507 0.72 -2.0 2,960,621 + Pf6N2E2_2507 0.88 -2.1 2,960,660 - -1.3 2,960,722 + +0.2 2,960,723 - +0.7 2,960,732 - -1.2 2,960,732 - -0.5 2,960,782 + Pf6N2E2_2508 0.20 +0.5 2,960,782 + Pf6N2E2_2508 0.20 +0.3 2,960,782 + +0.1 2,960,782 + Pf6N2E2_2508 0.20 +0.9 2,960,783 - Pf6N2E2_2508 0.21 +0.9 2,960,783 - Pf6N2E2_2508 0.21 -1.8 2,960,783 - Pf6N2E2_2508 0.21 +1.1 2,960,783 - Pf6N2E2_2508 0.21 +1.7 2,960,783 - Pf6N2E2_2508 0.21 -2.7 2,960,783 - Pf6N2E2_2508 0.21 -0.0 2,960,959 - -2.1 2,960,959 - +0.5 2,960,988 + -1.1 2,960,999 + +0.2 2,961,000 - +0.7 2,961,000 - -0.6 2,961,023 - -0.5 2,961,113 + -1.0 2,961,114 - -0.9 2,961,217 - Pf6N2E2_2509 0.29 -2.4 2,961,342 - Pf6N2E2_2509 0.54 -0.9 2,961,632 - -1.5
Or see this region's nucleotide sequence