Experiment: molybdate 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2277 and Pf6N2E2_2278 are separated by 246 nucleotides Pf6N2E2_2278 and Pf6N2E2_2279 are separated by 10 nucleotides Pf6N2E2_2279 and Pf6N2E2_2280 are separated by 11 nucleotides
Pf6N2E2_2277 - NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13), at 2,692,096 to 2,693,481
_2277
Pf6N2E2_2278 - Transcription-repair coupling factor, at 2,693,728 to 2,697,177
_2278
Pf6N2E2_2279 - FIG00954981: hypothetical protein, at 2,697,188 to 2,697,754
_2279
Pf6N2E2_2280 - COG0553: Superfamily II DNA/RNA helicases, SNF2 family, at 2,697,766 to 2,700,459
_2280
Position (kb)
2693
2694
2695
2696
2697
2698 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2692.865 kb on + strand, within Pf6N2E2_2277 at 2692.874 kb on + strand, within Pf6N2E2_2277 at 2692.874 kb on + strand, within Pf6N2E2_2277 at 2693.582 kb on - strand at 2693.582 kb on - strand at 2693.686 kb on + strand at 2693.769 kb on + strand at 2693.769 kb on + strand at 2693.769 kb on + strand at 2693.770 kb on - strand at 2693.770 kb on - strand at 2693.960 kb on - strand at 2693.960 kb on - strand at 2694.061 kb on - strand at 2694.061 kb on - strand at 2694.068 kb on + strand at 2694.069 kb on - strand at 2694.069 kb on - strand at 2694.196 kb on + strand, within Pf6N2E2_2278 at 2694.197 kb on - strand, within Pf6N2E2_2278 at 2694.505 kb on + strand, within Pf6N2E2_2278 at 2694.505 kb on + strand, within Pf6N2E2_2278 at 2694.505 kb on + strand, within Pf6N2E2_2278 at 2694.505 kb on + strand, within Pf6N2E2_2278 at 2694.506 kb on - strand, within Pf6N2E2_2278 at 2694.506 kb on - strand, within Pf6N2E2_2278 at 2694.548 kb on - strand, within Pf6N2E2_2278 at 2694.548 kb on - strand, within Pf6N2E2_2278 at 2694.548 kb on - strand, within Pf6N2E2_2278 at 2694.665 kb on + strand, within Pf6N2E2_2278 at 2694.666 kb on - strand, within Pf6N2E2_2278 at 2694.666 kb on - strand, within Pf6N2E2_2278 at 2694.669 kb on - strand, within Pf6N2E2_2278 at 2695.037 kb on + strand, within Pf6N2E2_2278 at 2695.037 kb on + strand, within Pf6N2E2_2278 at 2695.037 kb on + strand, within Pf6N2E2_2278 at 2695.037 kb on + strand, within Pf6N2E2_2278 at 2695.038 kb on - strand, within Pf6N2E2_2278 at 2695.038 kb on - strand, within Pf6N2E2_2278 at 2695.291 kb on + strand, within Pf6N2E2_2278 at 2695.291 kb on + strand, within Pf6N2E2_2278 at 2695.291 kb on + strand, within Pf6N2E2_2278 at 2695.291 kb on + strand, within Pf6N2E2_2278 at 2695.291 kb on + strand, within Pf6N2E2_2278 at 2695.291 kb on + strand, within Pf6N2E2_2278 at 2695.291 kb on + strand, within Pf6N2E2_2278 at 2695.292 kb on - strand, within Pf6N2E2_2278 at 2695.292 kb on - strand, within Pf6N2E2_2278 at 2695.292 kb on - strand, within Pf6N2E2_2278 at 2695.447 kb on + strand, within Pf6N2E2_2278 at 2695.447 kb on + strand, within Pf6N2E2_2278 at 2695.447 kb on + strand, within Pf6N2E2_2278 at 2695.447 kb on + strand, within Pf6N2E2_2278 at 2695.447 kb on + strand, within Pf6N2E2_2278 at 2695.447 kb on + strand, within Pf6N2E2_2278 at 2695.447 kb on + strand, within Pf6N2E2_2278 at 2695.447 kb on + strand, within Pf6N2E2_2278 at 2695.447 kb on + strand, within Pf6N2E2_2278 at 2695.447 kb on + strand, within Pf6N2E2_2278 at 2695.447 kb on + strand, within Pf6N2E2_2278 at 2695.448 kb on - strand, within Pf6N2E2_2278 at 2695.448 kb on - strand, within Pf6N2E2_2278 at 2695.448 kb on - strand, within Pf6N2E2_2278 at 2695.448 kb on - strand, within Pf6N2E2_2278 at 2695.448 kb on - strand, within Pf6N2E2_2278 at 2695.448 kb on - strand, within Pf6N2E2_2278 at 2695.448 kb on - strand, within Pf6N2E2_2278 at 2695.502 kb on - strand, within Pf6N2E2_2278 at 2695.729 kb on + strand, within Pf6N2E2_2278 at 2695.729 kb on + strand, within Pf6N2E2_2278 at 2695.729 kb on + strand, within Pf6N2E2_2278 at 2695.729 kb on + strand, within Pf6N2E2_2278 at 2695.730 kb on - strand, within Pf6N2E2_2278 at 2695.730 kb on - strand, within Pf6N2E2_2278 at 2696.170 kb on + strand, within Pf6N2E2_2278 at 2696.170 kb on + strand, within Pf6N2E2_2278 at 2696.170 kb on + strand, within Pf6N2E2_2278 at 2696.170 kb on + strand, within Pf6N2E2_2278 at 2696.171 kb on - strand, within Pf6N2E2_2278 at 2696.171 kb on - strand, within Pf6N2E2_2278 at 2696.171 kb on - strand, within Pf6N2E2_2278 at 2696.171 kb on - strand, within Pf6N2E2_2278 at 2696.171 kb on - strand, within Pf6N2E2_2278 at 2696.173 kb on + strand, within Pf6N2E2_2278 at 2696.173 kb on + strand, within Pf6N2E2_2278 at 2696.173 kb on + strand, within Pf6N2E2_2278 at 2696.173 kb on + strand, within Pf6N2E2_2278 at 2696.174 kb on - strand, within Pf6N2E2_2278 at 2696.174 kb on - strand, within Pf6N2E2_2278 at 2696.174 kb on - strand, within Pf6N2E2_2278 at 2696.174 kb on - strand, within Pf6N2E2_2278 at 2696.174 kb on - strand, within Pf6N2E2_2278 at 2696.174 kb on - strand, within Pf6N2E2_2278 at 2696.305 kb on + strand, within Pf6N2E2_2278 at 2696.305 kb on + strand, within Pf6N2E2_2278 at 2696.306 kb on - strand, within Pf6N2E2_2278 at 2696.306 kb on - strand, within Pf6N2E2_2278 at 2696.464 kb on + strand, within Pf6N2E2_2278 at 2696.464 kb on + strand, within Pf6N2E2_2278 at 2696.464 kb on + strand, within Pf6N2E2_2278 at 2696.465 kb on - strand, within Pf6N2E2_2278 at 2696.470 kb on + strand, within Pf6N2E2_2278 at 2696.470 kb on + strand, within Pf6N2E2_2278 at 2696.470 kb on + strand, within Pf6N2E2_2278 at 2696.470 kb on + strand, within Pf6N2E2_2278 at 2696.470 kb on + strand, within Pf6N2E2_2278 at 2696.471 kb on - strand, within Pf6N2E2_2278 at 2696.471 kb on - strand, within Pf6N2E2_2278 at 2696.471 kb on - strand, within Pf6N2E2_2278 at 2696.471 kb on - strand, within Pf6N2E2_2278 at 2696.656 kb on + strand, within Pf6N2E2_2278 at 2696.657 kb on - strand, within Pf6N2E2_2278 at 2696.657 kb on - strand, within Pf6N2E2_2278 at 2696.657 kb on - strand, within Pf6N2E2_2278 at 2696.779 kb on + strand, within Pf6N2E2_2278 at 2696.779 kb on + strand, within Pf6N2E2_2278 at 2697.258 kb on - strand, within Pf6N2E2_2279 at 2697.419 kb on + strand, within Pf6N2E2_2279 at 2697.420 kb on - strand, within Pf6N2E2_2279 at 2697.420 kb on - strand, within Pf6N2E2_2279 at 2697.427 kb on - strand, within Pf6N2E2_2279 at 2697.640 kb on + strand, within Pf6N2E2_2279 at 2697.640 kb on + strand, within Pf6N2E2_2279 at 2698.152 kb on - strand, within Pf6N2E2_2280
Per-strain Table
Position Strand Gene LocusTag Fraction molybdate 0.25 M remove 2,692,865 + Pf6N2E2_2277 0.55 -0.7 2,692,874 + Pf6N2E2_2277 0.56 +0.1 2,692,874 + Pf6N2E2_2277 0.56 -0.0 2,693,582 - +0.2 2,693,582 - -0.4 2,693,686 + +1.0 2,693,769 + -2.1 2,693,769 + -0.4 2,693,769 + -2.8 2,693,770 - -3.0 2,693,770 - -1.0 2,693,960 - -1.7 2,693,960 - -3.7 2,694,061 - -3.1 2,694,061 - -2.5 2,694,068 + -2.2 2,694,069 - -0.7 2,694,069 - -1.9 2,694,196 + Pf6N2E2_2278 0.14 -2.3 2,694,197 - Pf6N2E2_2278 0.14 -2.8 2,694,505 + Pf6N2E2_2278 0.23 -2.1 2,694,505 + Pf6N2E2_2278 0.23 -1.0 2,694,505 + Pf6N2E2_2278 0.23 +0.6 2,694,505 + Pf6N2E2_2278 0.23 -1.2 2,694,506 - Pf6N2E2_2278 0.23 -1.8 2,694,506 - Pf6N2E2_2278 0.23 -2.2 2,694,548 - Pf6N2E2_2278 0.24 -1.3 2,694,548 - Pf6N2E2_2278 0.24 -3.0 2,694,548 - Pf6N2E2_2278 0.24 -1.2 2,694,665 + Pf6N2E2_2278 0.27 -3.6 2,694,666 - Pf6N2E2_2278 0.27 -1.9 2,694,666 - Pf6N2E2_2278 0.27 -1.5 2,694,669 - Pf6N2E2_2278 0.27 -3.8 2,695,037 + Pf6N2E2_2278 0.38 -1.8 2,695,037 + Pf6N2E2_2278 0.38 -1.3 2,695,037 + Pf6N2E2_2278 0.38 -1.8 2,695,037 + Pf6N2E2_2278 0.38 -3.3 2,695,038 - Pf6N2E2_2278 0.38 -2.9 2,695,038 - Pf6N2E2_2278 0.38 -0.8 2,695,291 + Pf6N2E2_2278 0.45 -2.4 2,695,291 + Pf6N2E2_2278 0.45 -2.7 2,695,291 + Pf6N2E2_2278 0.45 -1.2 2,695,291 + Pf6N2E2_2278 0.45 -3.1 2,695,291 + Pf6N2E2_2278 0.45 -2.8 2,695,291 + Pf6N2E2_2278 0.45 -3.8 2,695,291 + Pf6N2E2_2278 0.45 -2.8 2,695,292 - Pf6N2E2_2278 0.45 -3.4 2,695,292 - Pf6N2E2_2278 0.45 -1.9 2,695,292 - Pf6N2E2_2278 0.45 -2.1 2,695,447 + Pf6N2E2_2278 0.50 -2.9 2,695,447 + Pf6N2E2_2278 0.50 -3.0 2,695,447 + Pf6N2E2_2278 0.50 -1.4 2,695,447 + Pf6N2E2_2278 0.50 -2.3 2,695,447 + Pf6N2E2_2278 0.50 -3.1 2,695,447 + Pf6N2E2_2278 0.50 -1.3 2,695,447 + Pf6N2E2_2278 0.50 -1.1 2,695,447 + Pf6N2E2_2278 0.50 -3.2 2,695,447 + Pf6N2E2_2278 0.50 -3.1 2,695,447 + Pf6N2E2_2278 0.50 -2.8 2,695,447 + Pf6N2E2_2278 0.50 -2.4 2,695,448 - Pf6N2E2_2278 0.50 -2.8 2,695,448 - Pf6N2E2_2278 0.50 -2.8 2,695,448 - Pf6N2E2_2278 0.50 -3.4 2,695,448 - Pf6N2E2_2278 0.50 -1.8 2,695,448 - Pf6N2E2_2278 0.50 -2.0 2,695,448 - Pf6N2E2_2278 0.50 -4.0 2,695,448 - Pf6N2E2_2278 0.50 -2.0 2,695,502 - Pf6N2E2_2278 0.51 -2.4 2,695,729 + Pf6N2E2_2278 0.58 -1.9 2,695,729 + Pf6N2E2_2278 0.58 -2.3 2,695,729 + Pf6N2E2_2278 0.58 -2.8 2,695,729 + Pf6N2E2_2278 0.58 -2.1 2,695,730 - Pf6N2E2_2278 0.58 -1.0 2,695,730 - Pf6N2E2_2278 0.58 -3.3 2,696,170 + Pf6N2E2_2278 0.71 -3.2 2,696,170 + Pf6N2E2_2278 0.71 -3.2 2,696,170 + Pf6N2E2_2278 0.71 -2.7 2,696,170 + Pf6N2E2_2278 0.71 -3.0 2,696,171 - Pf6N2E2_2278 0.71 -2.4 2,696,171 - Pf6N2E2_2278 0.71 -1.2 2,696,171 - Pf6N2E2_2278 0.71 -3.1 2,696,171 - Pf6N2E2_2278 0.71 -3.4 2,696,171 - Pf6N2E2_2278 0.71 -1.8 2,696,173 + Pf6N2E2_2278 0.71 -1.2 2,696,173 + Pf6N2E2_2278 0.71 -2.8 2,696,173 + Pf6N2E2_2278 0.71 -2.9 2,696,173 + Pf6N2E2_2278 0.71 -2.1 2,696,174 - Pf6N2E2_2278 0.71 -2.5 2,696,174 - Pf6N2E2_2278 0.71 -3.3 2,696,174 - Pf6N2E2_2278 0.71 -0.8 2,696,174 - Pf6N2E2_2278 0.71 -0.6 2,696,174 - Pf6N2E2_2278 0.71 -3.0 2,696,174 - Pf6N2E2_2278 0.71 -3.0 2,696,305 + Pf6N2E2_2278 0.75 -0.0 2,696,305 + Pf6N2E2_2278 0.75 -2.5 2,696,306 - Pf6N2E2_2278 0.75 -2.5 2,696,306 - Pf6N2E2_2278 0.75 -1.2 2,696,464 + Pf6N2E2_2278 0.79 -2.9 2,696,464 + Pf6N2E2_2278 0.79 -2.6 2,696,464 + Pf6N2E2_2278 0.79 -2.6 2,696,465 - Pf6N2E2_2278 0.79 -2.7 2,696,470 + Pf6N2E2_2278 0.79 -3.3 2,696,470 + Pf6N2E2_2278 0.79 -2.6 2,696,470 + Pf6N2E2_2278 0.79 -2.6 2,696,470 + Pf6N2E2_2278 0.79 -3.9 2,696,470 + Pf6N2E2_2278 0.79 -3.1 2,696,471 - Pf6N2E2_2278 0.80 -2.5 2,696,471 - Pf6N2E2_2278 0.80 -3.3 2,696,471 - Pf6N2E2_2278 0.80 -3.5 2,696,471 - Pf6N2E2_2278 0.80 -1.4 2,696,656 + Pf6N2E2_2278 0.85 -4.3 2,696,657 - Pf6N2E2_2278 0.85 -2.2 2,696,657 - Pf6N2E2_2278 0.85 -3.4 2,696,657 - Pf6N2E2_2278 0.85 -3.1 2,696,779 + Pf6N2E2_2278 0.88 -2.0 2,696,779 + Pf6N2E2_2278 0.88 -1.9 2,697,258 - Pf6N2E2_2279 0.12 -0.4 2,697,419 + Pf6N2E2_2279 0.41 +0.1 2,697,420 - Pf6N2E2_2279 0.41 -1.4 2,697,420 - Pf6N2E2_2279 0.41 -0.2 2,697,427 - Pf6N2E2_2279 0.42 +0.2 2,697,640 + Pf6N2E2_2279 0.80 +0.1 2,697,640 + Pf6N2E2_2279 0.80 +0.7 2,698,152 - Pf6N2E2_2280 0.14 +1.5
Or see this region's nucleotide sequence