Experiment: molybdate 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2180 and Pf6N2E2_2181 are separated by 61 nucleotides Pf6N2E2_2181 and Pf6N2E2_2182 are separated by 133 nucleotides Pf6N2E2_2182 and Pf6N2E2_2183 overlap by 4 nucleotides
Pf6N2E2_2180 - Arginine N-succinyltransferase, alpha subunit (EC 2.3.1.109), at 2,585,141 to 2,586,157
_2180
Pf6N2E2_2181 - Arginine N-succinyltransferase (EC 2.3.1.109), at 2,586,219 to 2,587,253
_2181
Pf6N2E2_2182 - hypothetical protein, at 2,587,387 to 2,588,166
_2182
Pf6N2E2_2183 - hypothetical protein, at 2,588,163 to 2,588,825
_2183
Position (kb)
2586
2587
2588 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2585.388 kb on - strand, within Pf6N2E2_2180 at 2585.402 kb on + strand, within Pf6N2E2_2180 at 2585.781 kb on - strand, within Pf6N2E2_2180 at 2585.781 kb on - strand, within Pf6N2E2_2180 at 2585.781 kb on - strand, within Pf6N2E2_2180 at 2585.781 kb on - strand, within Pf6N2E2_2180 at 2585.888 kb on + strand, within Pf6N2E2_2180 at 2585.888 kb on + strand at 2585.889 kb on - strand, within Pf6N2E2_2180 at 2585.889 kb on - strand, within Pf6N2E2_2180 at 2585.896 kb on + strand at 2586.038 kb on + strand, within Pf6N2E2_2180 at 2586.153 kb on + strand at 2586.201 kb on + strand at 2586.201 kb on + strand at 2586.201 kb on + strand at 2586.201 kb on + strand at 2586.202 kb on - strand at 2586.202 kb on - strand at 2586.202 kb on - strand at 2586.202 kb on - strand at 2586.202 kb on - strand at 2586.202 kb on - strand at 2586.472 kb on - strand at 2586.472 kb on - strand, within Pf6N2E2_2181 at 2586.477 kb on + strand, within Pf6N2E2_2181 at 2586.850 kb on - strand, within Pf6N2E2_2181 at 2587.285 kb on - strand at 2587.285 kb on - strand at 2587.289 kb on - strand at 2587.289 kb on - strand at 2587.289 kb on - strand at 2587.329 kb on - strand at 2587.329 kb on - strand at 2587.357 kb on - strand at 2587.434 kb on + strand at 2587.457 kb on + strand at 2587.652 kb on - strand, within Pf6N2E2_2182 at 2587.671 kb on + strand, within Pf6N2E2_2182 at 2587.712 kb on - strand, within Pf6N2E2_2182 at 2587.884 kb on - strand, within Pf6N2E2_2182 at 2587.884 kb on - strand, within Pf6N2E2_2182 at 2587.884 kb on - strand, within Pf6N2E2_2182 at 2588.017 kb on + strand, within Pf6N2E2_2182 at 2588.017 kb on + strand, within Pf6N2E2_2182 at 2588.018 kb on - strand, within Pf6N2E2_2182 at 2588.024 kb on - strand, within Pf6N2E2_2182 at 2588.092 kb on + strand at 2588.093 kb on - strand at 2588.093 kb on - strand at 2588.199 kb on + strand at 2588.199 kb on + strand at 2588.200 kb on - strand at 2588.200 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction molybdate 0.25 M remove 2,585,388 - Pf6N2E2_2180 0.24 -1.7 2,585,402 + Pf6N2E2_2180 0.26 -0.7 2,585,781 - Pf6N2E2_2180 0.63 -1.9 2,585,781 - Pf6N2E2_2180 0.63 +2.6 2,585,781 - Pf6N2E2_2180 0.63 -2.2 2,585,781 - Pf6N2E2_2180 0.63 -0.4 2,585,888 + Pf6N2E2_2180 0.73 +1.9 2,585,888 + +1.2 2,585,889 - Pf6N2E2_2180 0.74 -0.6 2,585,889 - Pf6N2E2_2180 0.74 +0.5 2,585,896 + +1.6 2,586,038 + Pf6N2E2_2180 0.88 -0.0 2,586,153 + +1.1 2,586,201 + +1.3 2,586,201 + +1.0 2,586,201 + +0.3 2,586,201 + +1.2 2,586,202 - +0.4 2,586,202 - -1.4 2,586,202 - -0.5 2,586,202 - -0.3 2,586,202 - +0.6 2,586,202 - +1.3 2,586,472 - +0.3 2,586,472 - Pf6N2E2_2181 0.24 +1.2 2,586,477 + Pf6N2E2_2181 0.25 -2.5 2,586,850 - Pf6N2E2_2181 0.61 -0.7 2,587,285 - -0.3 2,587,285 - -1.4 2,587,289 - +0.5 2,587,289 - -0.1 2,587,289 - +0.8 2,587,329 - +0.7 2,587,329 - -0.2 2,587,357 - -0.8 2,587,434 + +0.1 2,587,457 + -1.4 2,587,652 - Pf6N2E2_2182 0.34 +1.2 2,587,671 + Pf6N2E2_2182 0.36 -0.0 2,587,712 - Pf6N2E2_2182 0.42 -2.0 2,587,884 - Pf6N2E2_2182 0.64 +0.1 2,587,884 - Pf6N2E2_2182 0.64 +0.6 2,587,884 - Pf6N2E2_2182 0.64 -0.2 2,588,017 + Pf6N2E2_2182 0.81 -0.8 2,588,017 + Pf6N2E2_2182 0.81 +2.4 2,588,018 - Pf6N2E2_2182 0.81 -0.1 2,588,024 - Pf6N2E2_2182 0.82 -1.1 2,588,092 + +0.8 2,588,093 - -0.4 2,588,093 - -0.1 2,588,199 + -0.6 2,588,199 + -0.4 2,588,200 - +0.6 2,588,200 - -0.5
Or see this region's nucleotide sequence