Experiment: molybdate 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2026 and Pf6N2E2_2027 are separated by 45 nucleotides Pf6N2E2_2027 and Pf6N2E2_2028 are separated by 362 nucleotides Pf6N2E2_2028 and Pf6N2E2_2029 are separated by 95 nucleotides Pf6N2E2_2029 and Pf6N2E2_2030 are separated by 126 nucleotides
Pf6N2E2_2026 - hypothetical protein, at 2,415,118 to 2,415,924
_2026
Pf6N2E2_2027 - hypothetical protein, at 2,415,970 to 2,416,140
_2027
Pf6N2E2_2028 - Lipase precursor (EC 3.1.1.3), at 2,416,503 to 2,417,372
_2028
Pf6N2E2_2029 - Peptidyl-prolyl cis-trans isomerase PpiC (EC 5.2.1.8), at 2,417,468 to 2,417,749
_2029
Pf6N2E2_2030 - ABC transporter, periplasmic substrate-binding protein, at 2,417,876 to 2,419,744
_2030
Position (kb)
2416
2417
2418 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2415.524 kb on + strand, within Pf6N2E2_2026 at 2415.524 kb on + strand, within Pf6N2E2_2026 at 2415.524 kb on + strand, within Pf6N2E2_2026 at 2415.524 kb on + strand, within Pf6N2E2_2026 at 2415.525 kb on - strand, within Pf6N2E2_2026 at 2415.525 kb on - strand, within Pf6N2E2_2026 at 2415.525 kb on - strand, within Pf6N2E2_2026 at 2415.525 kb on - strand, within Pf6N2E2_2026 at 2415.547 kb on + strand, within Pf6N2E2_2026 at 2415.547 kb on + strand, within Pf6N2E2_2026 at 2415.547 kb on + strand, within Pf6N2E2_2026 at 2415.547 kb on + strand, within Pf6N2E2_2026 at 2415.547 kb on + strand, within Pf6N2E2_2026 at 2415.547 kb on + strand, within Pf6N2E2_2026 at 2415.548 kb on - strand, within Pf6N2E2_2026 at 2415.548 kb on - strand, within Pf6N2E2_2026 at 2415.548 kb on - strand, within Pf6N2E2_2026 at 2415.613 kb on + strand, within Pf6N2E2_2026 at 2415.613 kb on + strand, within Pf6N2E2_2026 at 2415.613 kb on + strand, within Pf6N2E2_2026 at 2415.614 kb on - strand, within Pf6N2E2_2026 at 2415.793 kb on + strand, within Pf6N2E2_2026 at 2415.794 kb on - strand, within Pf6N2E2_2026 at 2415.850 kb on - strand at 2415.938 kb on - strand at 2415.977 kb on + strand at 2416.169 kb on + strand at 2416.169 kb on + strand at 2416.169 kb on + strand at 2416.170 kb on - strand at 2416.241 kb on - strand at 2416.241 kb on - strand at 2416.241 kb on - strand at 2416.311 kb on + strand at 2416.311 kb on + strand at 2416.312 kb on - strand at 2416.334 kb on - strand at 2416.334 kb on - strand at 2416.334 kb on - strand at 2416.334 kb on - strand at 2416.334 kb on - strand at 2416.345 kb on + strand at 2416.345 kb on + strand at 2416.346 kb on - strand at 2416.369 kb on - strand at 2416.428 kb on + strand at 2416.428 kb on + strand at 2416.441 kb on - strand at 2416.684 kb on + strand, within Pf6N2E2_2028 at 2416.684 kb on + strand, within Pf6N2E2_2028 at 2416.684 kb on + strand, within Pf6N2E2_2028 at 2416.684 kb on + strand, within Pf6N2E2_2028 at 2416.684 kb on + strand, within Pf6N2E2_2028 at 2416.685 kb on - strand, within Pf6N2E2_2028 at 2416.685 kb on - strand, within Pf6N2E2_2028 at 2417.091 kb on + strand, within Pf6N2E2_2028 at 2417.092 kb on - strand, within Pf6N2E2_2028 at 2417.092 kb on - strand, within Pf6N2E2_2028 at 2417.094 kb on + strand, within Pf6N2E2_2028 at 2417.094 kb on + strand, within Pf6N2E2_2028 at 2417.094 kb on + strand, within Pf6N2E2_2028 at 2417.095 kb on - strand, within Pf6N2E2_2028 at 2417.108 kb on + strand, within Pf6N2E2_2028 at 2417.109 kb on - strand, within Pf6N2E2_2028 at 2417.175 kb on + strand, within Pf6N2E2_2028 at 2417.176 kb on - strand, within Pf6N2E2_2028 at 2417.176 kb on - strand, within Pf6N2E2_2028 at 2417.176 kb on - strand, within Pf6N2E2_2028 at 2417.257 kb on - strand, within Pf6N2E2_2028 at 2417.270 kb on + strand, within Pf6N2E2_2028 at 2417.444 kb on - strand at 2417.675 kb on - strand, within Pf6N2E2_2029 at 2417.837 kb on - strand at 2417.902 kb on - strand at 2417.902 kb on - strand at 2417.972 kb on + strand at 2417.973 kb on - strand at 2417.991 kb on - strand at 2418.017 kb on + strand at 2418.017 kb on + strand at 2418.098 kb on + strand, within Pf6N2E2_2030 at 2418.098 kb on + strand, within Pf6N2E2_2030 at 2418.099 kb on - strand, within Pf6N2E2_2030 at 2418.143 kb on + strand, within Pf6N2E2_2030 at 2418.179 kb on + strand, within Pf6N2E2_2030 at 2418.180 kb on - strand, within Pf6N2E2_2030 at 2418.180 kb on - strand, within Pf6N2E2_2030 at 2418.180 kb on - strand, within Pf6N2E2_2030 at 2418.188 kb on + strand, within Pf6N2E2_2030 at 2418.189 kb on - strand, within Pf6N2E2_2030 at 2418.245 kb on + strand, within Pf6N2E2_2030 at 2418.245 kb on + strand, within Pf6N2E2_2030 at 2418.245 kb on + strand, within Pf6N2E2_2030 at 2418.246 kb on - strand, within Pf6N2E2_2030
Per-strain Table
Position Strand Gene LocusTag Fraction molybdate 0.25 M remove 2,415,524 + Pf6N2E2_2026 0.50 +0.4 2,415,524 + Pf6N2E2_2026 0.50 -0.7 2,415,524 + Pf6N2E2_2026 0.50 +0.3 2,415,524 + Pf6N2E2_2026 0.50 -0.3 2,415,525 - Pf6N2E2_2026 0.50 -1.3 2,415,525 - Pf6N2E2_2026 0.50 +0.2 2,415,525 - Pf6N2E2_2026 0.50 -0.6 2,415,525 - Pf6N2E2_2026 0.50 -2.0 2,415,547 + Pf6N2E2_2026 0.53 -0.0 2,415,547 + Pf6N2E2_2026 0.53 +0.7 2,415,547 + Pf6N2E2_2026 0.53 -0.5 2,415,547 + Pf6N2E2_2026 0.53 +0.7 2,415,547 + Pf6N2E2_2026 0.53 +0.3 2,415,547 + Pf6N2E2_2026 0.53 -0.1 2,415,548 - Pf6N2E2_2026 0.53 -0.8 2,415,548 - Pf6N2E2_2026 0.53 +0.4 2,415,548 - Pf6N2E2_2026 0.53 -1.0 2,415,613 + Pf6N2E2_2026 0.61 -1.2 2,415,613 + Pf6N2E2_2026 0.61 -1.4 2,415,613 + Pf6N2E2_2026 0.61 -0.1 2,415,614 - Pf6N2E2_2026 0.61 +0.9 2,415,793 + Pf6N2E2_2026 0.84 -0.8 2,415,794 - Pf6N2E2_2026 0.84 -0.1 2,415,850 - -0.3 2,415,938 - -0.4 2,415,977 + +0.1 2,416,169 + +2.2 2,416,169 + -0.3 2,416,169 + +1.5 2,416,170 - +1.2 2,416,241 - -0.8 2,416,241 - -1.3 2,416,241 - -0.3 2,416,311 + -0.6 2,416,311 + +1.2 2,416,312 - -0.1 2,416,334 - +0.2 2,416,334 - -1.7 2,416,334 - +0.2 2,416,334 - +0.8 2,416,334 - -0.0 2,416,345 + -1.1 2,416,345 + +2.2 2,416,346 - +0.4 2,416,369 - -1.3 2,416,428 + -0.4 2,416,428 + +0.2 2,416,441 - +0.3 2,416,684 + Pf6N2E2_2028 0.21 +0.0 2,416,684 + Pf6N2E2_2028 0.21 -1.7 2,416,684 + Pf6N2E2_2028 0.21 -0.8 2,416,684 + Pf6N2E2_2028 0.21 -1.7 2,416,684 + Pf6N2E2_2028 0.21 -0.8 2,416,685 - Pf6N2E2_2028 0.21 -0.8 2,416,685 - Pf6N2E2_2028 0.21 -0.7 2,417,091 + Pf6N2E2_2028 0.68 +0.5 2,417,092 - Pf6N2E2_2028 0.68 -0.6 2,417,092 - Pf6N2E2_2028 0.68 +0.5 2,417,094 + Pf6N2E2_2028 0.68 -1.8 2,417,094 + Pf6N2E2_2028 0.68 +0.6 2,417,094 + Pf6N2E2_2028 0.68 -0.3 2,417,095 - Pf6N2E2_2028 0.68 +0.7 2,417,108 + Pf6N2E2_2028 0.70 +0.5 2,417,109 - Pf6N2E2_2028 0.70 -1.5 2,417,175 + Pf6N2E2_2028 0.77 +0.4 2,417,176 - Pf6N2E2_2028 0.77 -1.8 2,417,176 - Pf6N2E2_2028 0.77 -0.9 2,417,176 - Pf6N2E2_2028 0.77 -0.3 2,417,257 - Pf6N2E2_2028 0.87 -0.1 2,417,270 + Pf6N2E2_2028 0.88 -0.1 2,417,444 - +0.8 2,417,675 - Pf6N2E2_2029 0.73 +0.8 2,417,837 - +0.3 2,417,902 - -1.3 2,417,902 - -0.4 2,417,972 + -0.3 2,417,973 - +0.4 2,417,991 - +0.5 2,418,017 + -0.5 2,418,017 + -2.2 2,418,098 + Pf6N2E2_2030 0.12 -1.2 2,418,098 + Pf6N2E2_2030 0.12 +0.7 2,418,099 - Pf6N2E2_2030 0.12 -0.3 2,418,143 + Pf6N2E2_2030 0.14 +1.5 2,418,179 + Pf6N2E2_2030 0.16 +1.0 2,418,180 - Pf6N2E2_2030 0.16 -0.1 2,418,180 - Pf6N2E2_2030 0.16 -0.0 2,418,180 - Pf6N2E2_2030 0.16 -0.8 2,418,188 + Pf6N2E2_2030 0.17 +0.4 2,418,189 - Pf6N2E2_2030 0.17 -1.1 2,418,245 + Pf6N2E2_2030 0.20 -1.0 2,418,245 + Pf6N2E2_2030 0.20 +0.1 2,418,245 + Pf6N2E2_2030 0.20 -1.0 2,418,246 - Pf6N2E2_2030 0.20 +0.6
Or see this region's nucleotide sequence