Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1984
Experiment: molybdate 0.25 M
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | molybdate 0.25 M |
---|---|---|---|---|---|
remove | |||||
2,348,371 | + | -1.3 | |||
2,348,371 | + | -1.7 | |||
2,348,372 | - | -0.7 | |||
2,348,372 | - | +0.8 | |||
2,348,372 | - | +0.8 | |||
2,348,590 | - | -0.3 | |||
2,348,629 | + | -0.5 | |||
2,348,629 | + | +0.7 | |||
2,348,630 | - | -0.4 | |||
2,348,630 | - | +0.7 | |||
2,348,631 | + | -0.6 | |||
2,348,631 | + | -2.4 | |||
2,348,632 | - | -0.4 | |||
2,348,632 | - | -0.5 | |||
2,348,692 | + | -0.5 | |||
2,348,693 | - | -0.3 | |||
2,348,802 | - | +1.5 | |||
2,348,857 | + | -0.5 | |||
2,348,940 | - | +0.5 | |||
2,348,940 | - | +1.5 | |||
2,348,940 | - | +0.2 | |||
2,349,136 | + | Pf6N2E2_1983 | 0.15 | -1.9 | |
2,349,137 | - | Pf6N2E2_1983 | 0.16 | -0.0 | |
2,349,187 | - | Pf6N2E2_1983 | 0.47 | +2.5 | |
2,349,187 | - | Pf6N2E2_1983 | 0.47 | -0.9 | |
2,349,187 | - | Pf6N2E2_1983 | 0.47 | +0.6 | |
2,349,281 | - | +0.3 | |||
2,349,281 | - | -1.1 | |||
2,349,298 | - | +0.4 | |||
2,349,494 | - | Pf6N2E2_1984 | 0.30 | -2.8 | |
2,349,497 | + | Pf6N2E2_1984 | 0.30 | -2.4 | |
2,349,497 | + | -0.5 | |||
2,349,567 | - | Pf6N2E2_1984 | 0.40 | -0.9 | |
2,349,598 | - | Pf6N2E2_1984 | 0.44 | -2.0 | |
2,349,669 | + | Pf6N2E2_1984 | 0.54 | -0.8 | |
2,349,859 | + | Pf6N2E2_1984 | 0.80 | -2.6 | |
2,349,860 | - | Pf6N2E2_1984 | 0.80 | +0.0 | |
2,349,904 | + | Pf6N2E2_1984 | 0.87 | -1.9 | |
2,350,099 | + | -2.1 | |||
2,350,787 | + | +1.2 | |||
2,350,957 | + | -0.7 |
Or see this region's nucleotide sequence