Experiment: molybdate 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_1633 and Pf6N2E2_1634 overlap by 4 nucleotides Pf6N2E2_1634 and Pf6N2E2_1635 are separated by 14 nucleotides Pf6N2E2_1635 and Pf6N2E2_1636 are separated by 290 nucleotides
Pf6N2E2_1633 - Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1), at 1,932,613 to 1,933,662
_1633
Pf6N2E2_1634 - ABC-type Fe3+-siderophore transport system, permease component, at 1,933,659 to 1,934,624
_1634
Pf6N2E2_1635 - ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components, at 1,934,639 to 1,935,442
_1635
Pf6N2E2_1636 - Ferrichrome-iron receptor, at 1,935,733 to 1,937,946
_1636
Position (kb)
1934
1935
1936 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1934.053 kb on + strand, within Pf6N2E2_1634 at 1934.053 kb on + strand, within Pf6N2E2_1634 at 1934.053 kb on + strand, within Pf6N2E2_1634 at 1934.054 kb on - strand, within Pf6N2E2_1634 at 1934.163 kb on - strand, within Pf6N2E2_1634 at 1934.163 kb on - strand, within Pf6N2E2_1634 at 1934.163 kb on - strand, within Pf6N2E2_1634 at 1934.300 kb on + strand, within Pf6N2E2_1634 at 1934.301 kb on - strand, within Pf6N2E2_1634 at 1934.301 kb on - strand, within Pf6N2E2_1634 at 1934.513 kb on - strand, within Pf6N2E2_1634 at 1934.513 kb on - strand, within Pf6N2E2_1634 at 1934.547 kb on + strand at 1934.547 kb on + strand at 1934.547 kb on + strand at 1934.547 kb on + strand at 1934.548 kb on - strand at 1934.548 kb on - strand at 1934.548 kb on - strand at 1934.709 kb on + strand at 1934.935 kb on + strand at 1934.936 kb on - strand, within Pf6N2E2_1635 at 1935.176 kb on - strand, within Pf6N2E2_1635 at 1935.295 kb on + strand, within Pf6N2E2_1635 at 1935.296 kb on - strand, within Pf6N2E2_1635 at 1935.311 kb on + strand, within Pf6N2E2_1635 at 1935.311 kb on + strand, within Pf6N2E2_1635 at 1935.312 kb on - strand, within Pf6N2E2_1635 at 1935.312 kb on - strand, within Pf6N2E2_1635 at 1935.312 kb on - strand, within Pf6N2E2_1635 at 1935.312 kb on - strand, within Pf6N2E2_1635 at 1935.411 kb on + strand at 1935.411 kb on + strand at 1935.411 kb on + strand at 1935.527 kb on + strand at 1935.549 kb on + strand at 1935.549 kb on + strand at 1935.549 kb on + strand at 1935.549 kb on + strand at 1935.550 kb on - strand at 1935.550 kb on - strand at 1935.550 kb on - strand at 1935.550 kb on - strand at 1935.550 kb on - strand at 1935.550 kb on - strand at 1935.550 kb on - strand at 1935.566 kb on - strand at 1935.566 kb on - strand at 1935.566 kb on - strand at 1935.582 kb on - strand at 1935.637 kb on + strand at 1935.646 kb on + strand at 1935.667 kb on + strand at 1935.667 kb on + strand at 1935.667 kb on + strand at 1935.668 kb on - strand at 1935.668 kb on - strand at 1935.879 kb on + strand at 1936.085 kb on - strand, within Pf6N2E2_1636 at 1936.161 kb on - strand, within Pf6N2E2_1636 at 1936.216 kb on + strand, within Pf6N2E2_1636
Per-strain Table
Position Strand Gene LocusTag Fraction molybdate 0.25 M remove 1,934,053 + Pf6N2E2_1634 0.41 -0.8 1,934,053 + Pf6N2E2_1634 0.41 -1.0 1,934,053 + Pf6N2E2_1634 0.41 -0.5 1,934,054 - Pf6N2E2_1634 0.41 -4.1 1,934,163 - Pf6N2E2_1634 0.52 +1.0 1,934,163 - Pf6N2E2_1634 0.52 -0.4 1,934,163 - Pf6N2E2_1634 0.52 -1.2 1,934,300 + Pf6N2E2_1634 0.66 -0.5 1,934,301 - Pf6N2E2_1634 0.66 -2.7 1,934,301 - Pf6N2E2_1634 0.66 -1.1 1,934,513 - Pf6N2E2_1634 0.88 -2.6 1,934,513 - Pf6N2E2_1634 0.88 -1.2 1,934,547 + -0.5 1,934,547 + -2.2 1,934,547 + -1.8 1,934,547 + -1.7 1,934,548 - -2.1 1,934,548 - -2.9 1,934,548 - -2.0 1,934,709 + +0.0 1,934,935 + -0.7 1,934,936 - Pf6N2E2_1635 0.37 -0.1 1,935,176 - Pf6N2E2_1635 0.67 -1.7 1,935,295 + Pf6N2E2_1635 0.82 -2.0 1,935,296 - Pf6N2E2_1635 0.82 -2.1 1,935,311 + Pf6N2E2_1635 0.84 -0.8 1,935,311 + Pf6N2E2_1635 0.84 -0.2 1,935,312 - Pf6N2E2_1635 0.84 -2.4 1,935,312 - Pf6N2E2_1635 0.84 -2.3 1,935,312 - Pf6N2E2_1635 0.84 -3.3 1,935,312 - Pf6N2E2_1635 0.84 -1.6 1,935,411 + -0.5 1,935,411 + -2.1 1,935,411 + -0.3 1,935,527 + +0.3 1,935,549 + +0.3 1,935,549 + -1.4 1,935,549 + -1.2 1,935,549 + -1.2 1,935,550 - -0.7 1,935,550 - -1.2 1,935,550 - -0.7 1,935,550 - -1.2 1,935,550 - -3.2 1,935,550 - -1.1 1,935,550 - -3.2 1,935,566 - +0.9 1,935,566 - -2.2 1,935,566 - -0.1 1,935,582 - -2.7 1,935,637 + -1.8 1,935,646 + -0.2 1,935,667 + -1.0 1,935,667 + -0.4 1,935,667 + +0.3 1,935,668 - -2.8 1,935,668 - -0.9 1,935,879 + -1.0 1,936,085 - Pf6N2E2_1636 0.16 -1.5 1,936,161 - Pf6N2E2_1636 0.19 -3.9 1,936,216 + Pf6N2E2_1636 0.22 -2.0
Or see this region's nucleotide sequence