Experiment: molybdate 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_1631 and Pf6N2E2_1632 are separated by 119 nucleotides Pf6N2E2_1632 and Pf6N2E2_1633 are separated by 83 nucleotides
Pf6N2E2_1631 - SyrP-like protein, at 1,930,512 to 1,931,501
_1631
Pf6N2E2_1632 - Iron(III) dicitrate transport system, periplasmic iron-binding protein FecB (TC 3.A.1.14.1), at 1,931,621 to 1,932,529
_1632
Pf6N2E2_1633 - Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1), at 1,932,613 to 1,933,662
_1633
Position (kb)
1931
1932
1933 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1930.787 kb on + strand, within Pf6N2E2_1631 at 1930.788 kb on - strand, within Pf6N2E2_1631 at 1930.991 kb on - strand, within Pf6N2E2_1631 at 1931.002 kb on + strand, within Pf6N2E2_1631 at 1931.003 kb on - strand, within Pf6N2E2_1631 at 1931.111 kb on + strand, within Pf6N2E2_1631 at 1931.111 kb on + strand, within Pf6N2E2_1631 at 1931.111 kb on + strand, within Pf6N2E2_1631 at 1931.112 kb on - strand, within Pf6N2E2_1631 at 1931.112 kb on - strand, within Pf6N2E2_1631 at 1931.207 kb on - strand, within Pf6N2E2_1631 at 1931.207 kb on - strand, within Pf6N2E2_1631 at 1931.207 kb on - strand, within Pf6N2E2_1631 at 1931.209 kb on - strand, within Pf6N2E2_1631 at 1931.252 kb on - strand, within Pf6N2E2_1631 at 1931.252 kb on - strand, within Pf6N2E2_1631 at 1931.277 kb on - strand, within Pf6N2E2_1631 at 1931.361 kb on + strand, within Pf6N2E2_1631 at 1931.362 kb on - strand, within Pf6N2E2_1631 at 1931.425 kb on - strand at 1931.503 kb on + strand at 1931.504 kb on - strand at 1931.504 kb on - strand at 1931.529 kb on + strand at 1931.545 kb on - strand at 1931.604 kb on - strand at 1931.623 kb on - strand at 1931.623 kb on - strand at 1931.701 kb on + strand at 1931.823 kb on + strand, within Pf6N2E2_1632 at 1931.823 kb on + strand, within Pf6N2E2_1632 at 1931.824 kb on - strand, within Pf6N2E2_1632 at 1931.824 kb on - strand, within Pf6N2E2_1632 at 1931.824 kb on - strand, within Pf6N2E2_1632 at 1931.824 kb on - strand, within Pf6N2E2_1632 at 1931.824 kb on - strand, within Pf6N2E2_1632 at 1931.875 kb on - strand, within Pf6N2E2_1632 at 1932.078 kb on + strand, within Pf6N2E2_1632 at 1932.120 kb on + strand, within Pf6N2E2_1632 at 1932.121 kb on - strand, within Pf6N2E2_1632 at 1932.121 kb on - strand, within Pf6N2E2_1632 at 1932.202 kb on - strand, within Pf6N2E2_1632 at 1932.498 kb on - strand at 1932.503 kb on + strand at 1932.503 kb on + strand at 1932.524 kb on + strand at 1932.524 kb on + strand at 1932.524 kb on + strand at 1932.525 kb on - strand at 1932.525 kb on - strand at 1932.525 kb on - strand at 1932.525 kb on - strand at 1932.525 kb on - strand at 1932.525 kb on - strand at 1932.525 kb on - strand at 1932.525 kb on - strand at 1932.525 kb on - strand at 1932.525 kb on - strand at 1932.525 kb on - strand at 1932.525 kb on - strand at 1932.525 kb on - strand at 1932.525 kb on - strand at 1932.525 kb on - strand at 1932.525 kb on - strand at 1932.525 kb on - strand at 1933.007 kb on - strand, within Pf6N2E2_1633 at 1933.023 kb on + strand, within Pf6N2E2_1633 at 1933.104 kb on - strand, within Pf6N2E2_1633 at 1933.254 kb on - strand, within Pf6N2E2_1633 at 1933.290 kb on + strand, within Pf6N2E2_1633 at 1933.524 kb on - strand, within Pf6N2E2_1633
Per-strain Table
Position Strand Gene LocusTag Fraction molybdate 0.25 M remove 1,930,787 + Pf6N2E2_1631 0.28 +1.9 1,930,788 - Pf6N2E2_1631 0.28 +0.9 1,930,991 - Pf6N2E2_1631 0.48 +0.2 1,931,002 + Pf6N2E2_1631 0.49 -0.5 1,931,003 - Pf6N2E2_1631 0.50 +0.7 1,931,111 + Pf6N2E2_1631 0.61 +1.7 1,931,111 + Pf6N2E2_1631 0.61 -1.3 1,931,111 + Pf6N2E2_1631 0.61 +1.5 1,931,112 - Pf6N2E2_1631 0.61 +1.0 1,931,112 - Pf6N2E2_1631 0.61 +1.1 1,931,207 - Pf6N2E2_1631 0.70 +0.7 1,931,207 - Pf6N2E2_1631 0.70 +1.5 1,931,207 - Pf6N2E2_1631 0.70 -0.2 1,931,209 - Pf6N2E2_1631 0.70 +0.3 1,931,252 - Pf6N2E2_1631 0.75 +1.6 1,931,252 - Pf6N2E2_1631 0.75 +0.5 1,931,277 - Pf6N2E2_1631 0.77 +1.1 1,931,361 + Pf6N2E2_1631 0.86 +1.6 1,931,362 - Pf6N2E2_1631 0.86 +0.0 1,931,425 - -0.4 1,931,503 + +0.3 1,931,504 - +0.1 1,931,504 - +0.1 1,931,529 + -0.2 1,931,545 - -1.8 1,931,604 - +0.8 1,931,623 - +2.3 1,931,623 - -0.4 1,931,701 + -3.2 1,931,823 + Pf6N2E2_1632 0.22 -2.4 1,931,823 + Pf6N2E2_1632 0.22 -1.2 1,931,824 - Pf6N2E2_1632 0.22 -2.2 1,931,824 - Pf6N2E2_1632 0.22 +0.8 1,931,824 - Pf6N2E2_1632 0.22 -1.7 1,931,824 - Pf6N2E2_1632 0.22 -0.7 1,931,824 - Pf6N2E2_1632 0.22 -1.8 1,931,875 - Pf6N2E2_1632 0.28 -1.7 1,932,078 + Pf6N2E2_1632 0.50 -2.0 1,932,120 + Pf6N2E2_1632 0.55 -1.7 1,932,121 - Pf6N2E2_1632 0.55 -2.7 1,932,121 - Pf6N2E2_1632 0.55 -0.8 1,932,202 - Pf6N2E2_1632 0.64 -1.2 1,932,498 - -1.7 1,932,503 + -0.5 1,932,503 + +0.3 1,932,524 + -2.6 1,932,524 + -3.4 1,932,524 + -1.5 1,932,525 - -1.7 1,932,525 - -0.5 1,932,525 - -1.6 1,932,525 - -1.0 1,932,525 - -1.8 1,932,525 - -4.1 1,932,525 - -2.1 1,932,525 - -2.5 1,932,525 - -0.7 1,932,525 - +0.3 1,932,525 - -1.8 1,932,525 - -1.3 1,932,525 - -2.3 1,932,525 - -1.8 1,932,525 - -1.6 1,932,525 - -0.8 1,932,525 - -2.8 1,933,007 - Pf6N2E2_1633 0.38 -2.6 1,933,023 + Pf6N2E2_1633 0.39 -1.8 1,933,104 - Pf6N2E2_1633 0.47 -2.5 1,933,254 - Pf6N2E2_1633 0.61 -2.8 1,933,290 + Pf6N2E2_1633 0.64 -1.0 1,933,524 - Pf6N2E2_1633 0.87 -2.7
Or see this region's nucleotide sequence