Experiment: molybdate 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_1623 and Pf6N2E2_1624 are separated by 36 nucleotides Pf6N2E2_1624 and Pf6N2E2_1625 are separated by 203 nucleotides Pf6N2E2_1625 and Pf6N2E2_1626 are separated by 7 nucleotides
Pf6N2E2_1623 - Siderophore biosynthesis diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76), at 1,899,027 to 1,900,457
_1623
Pf6N2E2_1624 - MbtH-like protein, at 1,900,494 to 1,900,709
_1624
Pf6N2E2_1625 - Ferric reductase (1.6.99.14), at 1,900,913 to 1,901,650
_1625
Pf6N2E2_1626 - Putative ATP-binding component of a transport system, at 1,901,658 to 1,903,301
_1626
Position (kb)
1900
1901
1902 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1900.276 kb on + strand, within Pf6N2E2_1623 at 1900.276 kb on + strand, within Pf6N2E2_1623 at 1900.277 kb on - strand, within Pf6N2E2_1623 at 1900.277 kb on - strand, within Pf6N2E2_1623 at 1900.434 kb on + strand at 1900.434 kb on + strand at 1900.435 kb on - strand at 1900.435 kb on - strand at 1900.473 kb on + strand at 1900.509 kb on + strand at 1900.509 kb on + strand at 1900.510 kb on - strand at 1900.510 kb on - strand at 1900.567 kb on + strand, within Pf6N2E2_1624 at 1900.567 kb on + strand, within Pf6N2E2_1624 at 1900.568 kb on - strand, within Pf6N2E2_1624 at 1900.568 kb on - strand, within Pf6N2E2_1624 at 1900.672 kb on - strand, within Pf6N2E2_1624 at 1900.672 kb on - strand, within Pf6N2E2_1624 at 1900.751 kb on - strand at 1900.855 kb on - strand at 1900.855 kb on - strand at 1900.856 kb on + strand at 1900.856 kb on + strand at 1900.857 kb on - strand at 1900.857 kb on - strand at 1901.001 kb on + strand, within Pf6N2E2_1625 at 1901.031 kb on - strand, within Pf6N2E2_1625 at 1901.291 kb on - strand, within Pf6N2E2_1625 at 1901.383 kb on + strand, within Pf6N2E2_1625 at 1901.384 kb on - strand, within Pf6N2E2_1625 at 1901.648 kb on + strand at 1901.648 kb on + strand at 1901.659 kb on + strand at 1901.698 kb on + strand at 1901.716 kb on + strand at 1901.729 kb on - strand at 1901.753 kb on - strand at 1901.821 kb on + strand at 1901.821 kb on + strand at 1901.822 kb on - strand at 1901.905 kb on - strand, within Pf6N2E2_1626 at 1902.172 kb on + strand, within Pf6N2E2_1626 at 1902.172 kb on + strand, within Pf6N2E2_1626 at 1902.173 kb on - strand, within Pf6N2E2_1626 at 1902.173 kb on - strand, within Pf6N2E2_1626 at 1902.499 kb on + strand, within Pf6N2E2_1626 at 1902.499 kb on + strand, within Pf6N2E2_1626 at 1902.558 kb on - strand, within Pf6N2E2_1626 at 1902.567 kb on + strand, within Pf6N2E2_1626
Per-strain Table
Position Strand Gene LocusTag Fraction molybdate 0.25 M remove 1,900,276 + Pf6N2E2_1623 0.87 +0.1 1,900,276 + Pf6N2E2_1623 0.87 -0.7 1,900,277 - Pf6N2E2_1623 0.87 +0.7 1,900,277 - Pf6N2E2_1623 0.87 -0.0 1,900,434 + -0.5 1,900,434 + +0.3 1,900,435 - +0.0 1,900,435 - +0.9 1,900,473 + +1.8 1,900,509 + +0.3 1,900,509 + -0.1 1,900,510 - +0.3 1,900,510 - -0.0 1,900,567 + Pf6N2E2_1624 0.34 -0.2 1,900,567 + Pf6N2E2_1624 0.34 -1.0 1,900,568 - Pf6N2E2_1624 0.34 -1.1 1,900,568 - Pf6N2E2_1624 0.34 -0.1 1,900,672 - Pf6N2E2_1624 0.82 -0.7 1,900,672 - Pf6N2E2_1624 0.82 -0.8 1,900,751 - +1.3 1,900,855 - +1.2 1,900,855 - -0.1 1,900,856 + +0.3 1,900,856 + -0.2 1,900,857 - -2.1 1,900,857 - +1.3 1,901,001 + Pf6N2E2_1625 0.12 -2.1 1,901,031 - Pf6N2E2_1625 0.16 -2.2 1,901,291 - Pf6N2E2_1625 0.51 -2.6 1,901,383 + Pf6N2E2_1625 0.64 -0.2 1,901,384 - Pf6N2E2_1625 0.64 -2.1 1,901,648 + +1.9 1,901,648 + +0.7 1,901,659 + -0.1 1,901,698 + -0.7 1,901,716 + -1.2 1,901,729 - -2.6 1,901,753 - -1.8 1,901,821 + -2.2 1,901,821 + -2.5 1,901,822 - -0.2 1,901,905 - Pf6N2E2_1626 0.15 -2.1 1,902,172 + Pf6N2E2_1626 0.31 -2.3 1,902,172 + Pf6N2E2_1626 0.31 -1.3 1,902,173 - Pf6N2E2_1626 0.31 -2.2 1,902,173 - Pf6N2E2_1626 0.31 -1.7 1,902,499 + Pf6N2E2_1626 0.51 -3.0 1,902,499 + Pf6N2E2_1626 0.51 -0.1 1,902,558 - Pf6N2E2_1626 0.55 -1.5 1,902,567 + Pf6N2E2_1626 0.55 -0.7
Or see this region's nucleotide sequence