Experiment: molybdate 0.25 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_1590 and Pf6N2E2_1591 are separated by 118 nucleotides Pf6N2E2_1591 and Pf6N2E2_1592 are separated by 95 nucleotides
Pf6N2E2_1590 - pentachlorophenol 4-monooxygenase, at 1,860,027 to 1,861,790
_1590
Pf6N2E2_1591 - hypothetical protein, at 1,861,909 to 1,863,009
_1591
Pf6N2E2_1592 - polyketide synthase, at 1,863,105 to 1,866,512
_1592
Position (kb)
1861
1862
1863
1864 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1860.941 kb on + strand, within Pf6N2E2_1590 at 1860.993 kb on + strand, within Pf6N2E2_1590 at 1860.993 kb on + strand, within Pf6N2E2_1590 at 1860.993 kb on + strand, within Pf6N2E2_1590 at 1860.994 kb on - strand, within Pf6N2E2_1590 at 1860.996 kb on - strand, within Pf6N2E2_1590 at 1861.017 kb on + strand, within Pf6N2E2_1590 at 1861.018 kb on - strand, within Pf6N2E2_1590 at 1861.018 kb on - strand, within Pf6N2E2_1590 at 1861.018 kb on - strand, within Pf6N2E2_1590 at 1861.018 kb on - strand, within Pf6N2E2_1590 at 1861.018 kb on - strand, within Pf6N2E2_1590 at 1861.059 kb on + strand, within Pf6N2E2_1590 at 1861.059 kb on + strand, within Pf6N2E2_1590 at 1861.060 kb on - strand, within Pf6N2E2_1590 at 1861.060 kb on - strand, within Pf6N2E2_1590 at 1861.242 kb on + strand, within Pf6N2E2_1590 at 1861.242 kb on + strand, within Pf6N2E2_1590 at 1861.483 kb on - strand, within Pf6N2E2_1590 at 1861.485 kb on + strand, within Pf6N2E2_1590 at 1861.515 kb on + strand, within Pf6N2E2_1590 at 1861.614 kb on - strand at 1861.668 kb on - strand at 1861.707 kb on + strand at 1861.707 kb on + strand at 1861.707 kb on + strand at 1861.708 kb on - strand at 1861.718 kb on - strand at 1861.976 kb on - strand at 1862.040 kb on - strand, within Pf6N2E2_1591 at 1862.120 kb on - strand, within Pf6N2E2_1591 at 1862.192 kb on + strand, within Pf6N2E2_1591 at 1862.250 kb on + strand, within Pf6N2E2_1591 at 1862.251 kb on - strand, within Pf6N2E2_1591 at 1862.251 kb on - strand, within Pf6N2E2_1591 at 1862.251 kb on - strand, within Pf6N2E2_1591 at 1862.538 kb on + strand, within Pf6N2E2_1591 at 1862.569 kb on + strand, within Pf6N2E2_1591 at 1862.569 kb on + strand, within Pf6N2E2_1591 at 1862.569 kb on + strand, within Pf6N2E2_1591 at 1862.569 kb on + strand, within Pf6N2E2_1591 at 1862.570 kb on - strand, within Pf6N2E2_1591 at 1862.570 kb on - strand, within Pf6N2E2_1591 at 1862.570 kb on - strand, within Pf6N2E2_1591 at 1863.083 kb on + strand at 1863.083 kb on + strand at 1863.084 kb on - strand at 1863.084 kb on - strand at 1863.084 kb on - strand at 1863.084 kb on - strand at 1863.084 kb on - strand at 1863.084 kb on - strand at 1863.084 kb on - strand at 1863.098 kb on - strand at 1863.250 kb on - strand at 1863.283 kb on - strand at 1863.283 kb on - strand at 1863.465 kb on + strand, within Pf6N2E2_1592 at 1863.465 kb on + strand, within Pf6N2E2_1592 at 1863.465 kb on + strand, within Pf6N2E2_1592 at 1863.466 kb on - strand, within Pf6N2E2_1592 at 1863.466 kb on - strand, within Pf6N2E2_1592 at 1863.466 kb on - strand, within Pf6N2E2_1592 at 1863.512 kb on + strand, within Pf6N2E2_1592 at 1863.603 kb on + strand, within Pf6N2E2_1592 at 1863.934 kb on - strand, within Pf6N2E2_1592 at 1863.946 kb on - strand, within Pf6N2E2_1592 at 1863.975 kb on + strand, within Pf6N2E2_1592 at 1863.976 kb on - strand, within Pf6N2E2_1592 at 1863.976 kb on - strand, within Pf6N2E2_1592 at 1863.999 kb on - strand, within Pf6N2E2_1592
Per-strain Table
Position Strand Gene LocusTag Fraction molybdate 0.25 M remove 1,860,941 + Pf6N2E2_1590 0.52 +0.4 1,860,993 + Pf6N2E2_1590 0.55 +0.1 1,860,993 + Pf6N2E2_1590 0.55 +0.7 1,860,993 + Pf6N2E2_1590 0.55 -1.4 1,860,994 - Pf6N2E2_1590 0.55 -0.7 1,860,996 - Pf6N2E2_1590 0.55 -2.3 1,861,017 + Pf6N2E2_1590 0.56 +0.4 1,861,018 - Pf6N2E2_1590 0.56 +0.5 1,861,018 - Pf6N2E2_1590 0.56 -0.3 1,861,018 - Pf6N2E2_1590 0.56 +0.7 1,861,018 - Pf6N2E2_1590 0.56 -0.2 1,861,018 - Pf6N2E2_1590 0.56 -0.7 1,861,059 + Pf6N2E2_1590 0.59 -0.7 1,861,059 + Pf6N2E2_1590 0.59 -0.7 1,861,060 - Pf6N2E2_1590 0.59 +0.3 1,861,060 - Pf6N2E2_1590 0.59 +0.6 1,861,242 + Pf6N2E2_1590 0.69 -0.6 1,861,242 + Pf6N2E2_1590 0.69 +0.6 1,861,483 - Pf6N2E2_1590 0.83 +2.6 1,861,485 + Pf6N2E2_1590 0.83 +1.3 1,861,515 + Pf6N2E2_1590 0.84 +1.7 1,861,614 - +0.5 1,861,668 - +0.7 1,861,707 + +0.0 1,861,707 + -0.7 1,861,707 + -2.3 1,861,708 - -1.7 1,861,718 - -0.6 1,861,976 - -0.4 1,862,040 - Pf6N2E2_1591 0.12 +1.5 1,862,120 - Pf6N2E2_1591 0.19 -0.5 1,862,192 + Pf6N2E2_1591 0.26 -1.6 1,862,250 + Pf6N2E2_1591 0.31 +0.9 1,862,251 - Pf6N2E2_1591 0.31 -0.7 1,862,251 - Pf6N2E2_1591 0.31 -0.1 1,862,251 - Pf6N2E2_1591 0.31 +0.0 1,862,538 + Pf6N2E2_1591 0.57 -1.3 1,862,569 + Pf6N2E2_1591 0.60 +1.1 1,862,569 + Pf6N2E2_1591 0.60 -1.0 1,862,569 + Pf6N2E2_1591 0.60 -1.1 1,862,569 + Pf6N2E2_1591 0.60 -0.2 1,862,570 - Pf6N2E2_1591 0.60 -0.5 1,862,570 - Pf6N2E2_1591 0.60 -1.8 1,862,570 - Pf6N2E2_1591 0.60 -0.3 1,863,083 + -0.6 1,863,083 + +0.3 1,863,084 - -2.6 1,863,084 - -0.3 1,863,084 - +1.3 1,863,084 - +0.3 1,863,084 - -2.3 1,863,084 - -0.5 1,863,084 - -0.1 1,863,098 - +1.3 1,863,250 - -0.1 1,863,283 - +0.3 1,863,283 - +0.2 1,863,465 + Pf6N2E2_1592 0.11 -2.5 1,863,465 + Pf6N2E2_1592 0.11 -1.8 1,863,465 + Pf6N2E2_1592 0.11 +1.0 1,863,466 - Pf6N2E2_1592 0.11 +0.9 1,863,466 - Pf6N2E2_1592 0.11 -1.1 1,863,466 - Pf6N2E2_1592 0.11 -0.3 1,863,512 + Pf6N2E2_1592 0.12 -0.7 1,863,603 + Pf6N2E2_1592 0.15 +1.3 1,863,934 - Pf6N2E2_1592 0.24 -1.1 1,863,946 - Pf6N2E2_1592 0.25 +0.7 1,863,975 + Pf6N2E2_1592 0.26 +1.0 1,863,976 - Pf6N2E2_1592 0.26 +0.3 1,863,976 - Pf6N2E2_1592 0.26 +0.1 1,863,999 - Pf6N2E2_1592 0.26 +0.6
Or see this region's nucleotide sequence